Os03g0103100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Physical impedance induced protein.
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Os03g0103100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Physical impedance induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.99 | 0.433 | 3.21 | -0.0176 | 0.225 | 1.75 | -0.713 | 3.6 | -0.00887 | 5.9 | 9.4 | 9 | -- | -- |
| 88.13 | 0.437 | 3.2 | -0.0104 | 0.216 | 1.08 | -0.654 | -- | -0.00243 | 5.31 | 9.433 | 8 | -- | -- |
| 85.23 | 0.43 | 3.21 | -0.029 | 0.219 | 1.92 | -- | 3.96 | -0.0073 | 6.41 | 9.3 | 6 | -- | -- |
| 89.33 | 0.44 | 3.19 | 0.0254 | 0.229 | 1.11 | -- | -- | 0.00941 | 5.8 | 9.3 | 6 | -- | -- |
| 87.77 | 0.436 | 3.21 | -0.0274 | -- | 1.89 | -- | 4.1 | -0.00493 | -- | 9.313 | 6 | -- | -- |
| 91.55 | 0.449 | 3.2 | -0.048 | 0.214 | -- | -0.617 | -- | -0.0232 | 6.22 | -- | -- | -- | -- |
| 92.31 | 0.45 | 3.2 | -0.0531 | 0.217 | -- | -- | -- | -0.0202 | 7.17 | -- | -- | -- | -- |
| 91.88 | 0.446 | 3.19 | -0.0406 | -- | 0.968 | -- | -- | 0.00446 | -- | 9.405 | 6 | -- | -- |
| 89.17 | 0.44 | 3.19 | -- | 0.231 | 1.02 | -- | -- | 0.000731 | 6.56 | 9.304 | 6 | -- | -- |
| 94.79 | 0.455 | 3.2 | -0.0491 | -- | -- | -- | -- | -0.0164 | -- | -- | -- | -- | -- |
| 92.39 | 0.45 | 3.2 | -- | 0.216 | -- | -- | -- | -0.0143 | 7.18 | -- | -- | -- | -- |
| 90.75 | 0.444 | 3.2 | -- | -- | 0.65 | -- | -- | 0.00729 | -- | 9.485 | 6 | -- | -- |
| 94.86 | 0.455 | 3.2 | -- | -- | -- | -- | -- | -0.011 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.73 | humidity | 90 | 90 | < th | dose dependent | rect. | 4 | 2 |
| 2 | 71.75 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 5 | 71.97 | humidity | 80 | 10 | < th | dose independent | rect. | 3 | 3 |
| 11 | 71.97 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 6 |
| 21 | 71.98 | humidity | 80 | 10 | < th | dose independent | rect. | 5 | 1 |
| 59 | 73.07 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 69 | 73.07 | radiation | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 79 | 75.02 | temperature | 20 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 101 | 76.10 | humidity | 80 | 270 | < th | dose independent | rect. | 2 | 1 |
| 171 | 79.13 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 181 | 79.53 | wind | 7 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 186 | 79.61 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 2 |
| 189 | 79.62 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 226 | 80.04 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 239 | 80.45 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 4 |
| 241 | 80.51 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 2 |
| 285 | 81.22 | radiation | 1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 299 | 81.60 | radiation | 1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 315 | 82.12 | temperature | 20 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 319 | 82.18 | temperature | 20 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 326 | 82.33 | radiation | 30 | 10 | > th | dose independent | rect. | 13 | 1 |
| 360 | 82.80 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 391 | 83.08 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 393 | 83.10 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 6 |
| 399 | 83.13 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 410 | 83.15 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 452 | 83.21 | radiation | 20 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 480 | 83.61 | radiation | 40 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 625 | 84.43 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 656 | 84.68 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 5 |
| 686 | 84.92 | wind | 5 | 10 | > th | dose dependent | rect. | 7 | 8 |
| 709 | 85.05 | radiation | 40 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 712 | 85.05 | wind | 5 | 720 | > th | dose independent | rect. | 4 | 4 |
| 728 | 85.06 | wind | 5 | 720 | > th | dose independent | rect. | 5 | 2 |
| 730 | 85.06 | wind | 3 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 757 | 85.12 | wind | 5 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 778 | 85.19 | wind | 9 | 90 | > th | dose independent | rect. | 10 | 1 |
| 813 | 85.27 | wind | 9 | 90 | > th | dose independent | rect. | 18 | 17 |
| 819 | 85.28 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 2 | 1 |
| 824 | 85.30 | wind | 9 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 877 | 85.45 | wind | 5 | 10 | > th | dose dependent | rect. | 24 | 14 |
| 879 | 85.46 | radiation | 10 | 10 | < th | dose independent | sin | 13 | NA |
| 880 | 85.46 | wind | 7 | 90 | > th | dose independent | rect. | 10 | 4 |
| 881 | 85.47 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 2 | 4 |
| 900 | 85.49 | radiation | 40 | 10 | < th | dose independent | sin | 13 | NA |
| 901 | 85.49 | wind | 5 | 10 | > th | dose independent | rect. | 7 | 5 |
| 955 | 85.55 | wind | 5 | 10 | > th | dose independent | rect. | 24 | 12 |
| 981 | 85.59 | wind | 7 | 90 | > th | dose independent | rect. | 7 | 7 |
| 1000 | 85.60 | humidity | 90 | 1440 | > th | dose dependent | rect. | 15 | 1 |