BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0620400 Os07g0620400|AK099524
(203 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0620400 Similar to GTP-binding protein-like 413 e-116
Os03g0392300 Similar to GTP-binding protein-like 335 2e-92
AK062677 130 7e-31
Os01g0265100 Similar to ADP-ribosylation factor 125 3e-29
Os01g0813400 Similar to ADP-ribosylation factor 1 123 8e-29
Os03g0811900 Similar to ADP-ribosylation factor 123 8e-29
Os05g0489600 Similar to ADP-ribosylation factor 1 123 8e-29
Os07g0223400 Similar to ADP-ribosylation factor 1 122 2e-28
Os03g0200800 ADP-ribosylation factor family protein 119 1e-27
Os02g0732500 Similar to ADP-ribosylation factor-like protein 119 1e-27
Os08g0248900 Similar to ADP-ribosylation factor 3 119 2e-27
Os11g0586900 Similar to ADP-ribosylation factor-like protein 5 117 7e-27
Os02g0327100 Similar to ARL2 G-protein 116 1e-26
Os10g0580200 Similar to ADP-ribosylation factor-like protein 115 2e-26
Os02g0128600 Similar to ADP-ribosylation factor-like protein 113 9e-26
Os06g0114200 105 2e-23
Os01g0338000 Similar to GTP-binding protein SAR1A 85 4e-17
Os01g0254000 Similar to NTGB2 (Fragment) 85 4e-17
Os12g0560300 Similar to NTGB2 (Fragment) 84 5e-17
Os06g0225000 Similar to NTGB3 (Fragment) 72 3e-13
>Os07g0620400 Similar to GTP-binding protein-like
Length = 203
Score = 413 bits (1061), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/203 (100%), Positives = 203/203 (100%)
Query: 1 MFSLFYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNI 60
MFSLFYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNI
Sbjct: 1 MFSLFYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNI 60
Query: 61 GRIEDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHH 120
GRIEDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHH
Sbjct: 61 GRIEDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHH 120
Query: 121 EDLQGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWL 180
EDLQGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWL
Sbjct: 121 EDLQGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWL 180
Query: 181 VEEMERSKRTEVLMARTETAEKI 203
VEEMERSKRTEVLMARTETAEKI
Sbjct: 181 VEEMERSKRTEVLMARTETAEKI 203
>Os03g0392300 Similar to GTP-binding protein-like
Length = 203
Score = 335 bits (858), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/196 (82%), Positives = 178/196 (90%)
Query: 1 MFSLFYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNI 60
MFSL YGLW+++F+K EFHV+ILGV KAGKTTLLEK+KSIYLK EGL DRIVPTVGLNI
Sbjct: 1 MFSLAYGLWKYIFNKTEFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNI 60
Query: 61 GRIEDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHH 120
GRIEDAN KLVFWDLGGQ GLRTIWEKYY+EAHA+IYVID+AAASSFEDAKSALEKVL H
Sbjct: 61 GRIEDANAKLVFWDLGGQVGLRTIWEKYYQEAHAIIYVIDAAAASSFEDAKSALEKVLRH 120
Query: 121 EDLQGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWL 180
EDL+G PLLIFANKQ+LP +T+EELAR+L LK LDERPY FQA SAYDG GIK+GIDW+
Sbjct: 121 EDLKGAPLLIFANKQDLPGVITDEELARYLQLKELDERPYKFQAVSAYDGRGIKSGIDWV 180
Query: 181 VEEMERSKRTEVLMAR 196
VE+MERSKRTEVL AR
Sbjct: 181 VEQMERSKRTEVLRAR 196
>AK062677
Length = 181
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 7/184 (3%)
Query: 5 FYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIE 64
F +++ +F K E ++++G+ AGKTT+L K+K L E +PT+G N+ +E
Sbjct: 5 FSRVFERLFGKQEMRILMVGLDAAGKTTILYKLK---LGEVVTT----IPTIGFNVETVE 57
Query: 65 DANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQ 124
N+ WD+GGQ +R +W YY+ +I+V+DS + A+ L ++L+ ++L+
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELR 117
Query: 125 GVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEM 184
LL+FANKQ+LP A++ E+ L L GL R + QA A G G+ G+DWL +
Sbjct: 118 DSILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATL 177
Query: 185 ERSK 188
++ K
Sbjct: 178 QKRK 181
>Os01g0265100 Similar to ADP-ribosylation factor
Length = 181
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 100/176 (56%), Gaps = 7/176 (3%)
Query: 5 FYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIE 64
F L+ +FSK E ++++G+ AGKTT+L K+K + +PT+G N+ +E
Sbjct: 5 FTKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVT-------TIPTIGFNVETVE 57
Query: 65 DANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQ 124
N+ WD+GGQ +R +W Y++ +I+V+DS +A+ L ++L+ ++L+
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 117
Query: 125 GVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWL 180
LL+FANKQ+LP A+ E+ L L L +R + Q+ A G G+ G+DWL
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWL 173
>Os01g0813400 Similar to ADP-ribosylation factor 1
Length = 181
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 7/180 (3%)
Query: 5 FYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIE 64
F L+ +F+K E ++++G+ AGKTT+L K+K + +PT+G N+ +E
Sbjct: 5 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-------TIPTIGFNVETVE 57
Query: 65 DANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQ 124
N+ WD+GGQ +R +W Y++ +I+V+DS +A+ L ++L+ ++L+
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELR 117
Query: 125 GVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEM 184
LL+FANKQ+LP A+ E+ L L L +R + Q+ A G G+ G+DWL +
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>Os03g0811900 Similar to ADP-ribosylation factor
Length = 181
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 7/176 (3%)
Query: 5 FYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIE 64
F L+ +F+K E ++++G+ AGKTT+L K+K + +PT+G N+ +E
Sbjct: 5 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-------TIPTIGFNVETVE 57
Query: 65 DANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQ 124
N+ WD+GGQ +R +W Y++ +I+V+DS +A+ L ++L+ ++L+
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 117
Query: 125 GVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWL 180
LL+FANKQ+LP A+ E+ L L L +R + Q+ A G G+ G+DWL
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWL 173
>Os05g0489600 Similar to ADP-ribosylation factor 1
Length = 181
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 7/180 (3%)
Query: 5 FYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIE 64
F L+ +F+K E ++++G+ AGKTT+L K+K + +PT+G N+ +E
Sbjct: 5 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-------TIPTIGFNVETVE 57
Query: 65 DANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQ 124
N+ WD+GGQ +R +W Y++ +I+V+DS +A+ L ++L+ ++L+
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELR 117
Query: 125 GVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEM 184
LL+FANKQ+LP A+ E+ L L L +R + Q+ A G G+ G+DWL +
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>Os07g0223400 Similar to ADP-ribosylation factor 1
Length = 181
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 7/176 (3%)
Query: 5 FYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIE 64
F L+ +F+K E ++++G+ AGKTT+L K+K + +PT+G N+ +E
Sbjct: 5 FGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-------TIPTIGFNVETVE 57
Query: 65 DANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQ 124
N+ WD+GGQ +R +W Y++ +I+V+DS +A+ L ++L+ ++L+
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 117
Query: 125 GVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWL 180
LL+FANKQ+LP A+ E+ L L L +R + Q+ A G G+ G+DWL
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWL 173
>Os03g0200800 ADP-ribosylation factor family protein
Length = 184
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 5 FYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIE 64
F + +F K E + ++G+ AGKT+L+ + + E+ ++PTVG N+ ++
Sbjct: 7 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGFSED------MIPTVGFNMRKVT 60
Query: 65 DANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQ 124
NV + WDLGGQP R++WE+Y A++YV+D+A + AKS L +L L
Sbjct: 61 KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADRENMAIAKSELHDLLSKPSLT 120
Query: 125 GVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEM 184
G+PLL+ NK + P A ++ + LK + +R S + T I + IDWLV+
Sbjct: 121 GIPLLVIGNKIDKPEAFPKQSFTDVMGLKTITDREVACFMISCKNSTNIDSVIDWLVKHS 180
Query: 185 ER 186
++
Sbjct: 181 KK 182
>Os02g0732500 Similar to ADP-ribosylation factor-like protein
Length = 184
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 13/189 (6%)
Query: 7 GLW-------QHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLN 59
GLW + +F K E + ++G+ AGKT+L+ V + G + ++PTVG N
Sbjct: 2 GLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVAT------GGYSEDMIPTVGFN 55
Query: 60 IGRIEDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLH 119
+ ++ NV + WDLGGQ RT+WE+Y A++YV+D+A S AKS L +L
Sbjct: 56 MRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLT 115
Query: 120 HEDLQGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDW 179
+ L G+PLL+ NK + AV+++ L L L+ + +R S D I IDW
Sbjct: 116 KQSLAGIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDW 175
Query: 180 LVEEMERSK 188
L++ +K
Sbjct: 176 LIKHSRTAK 184
>Os08g0248900 Similar to ADP-ribosylation factor 3
Length = 182
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 7/182 (3%)
Query: 4 LFYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRI 63
+F L+ VF E +++LG+ AGKTT+L +++ + +PT+G N+ +
Sbjct: 4 VFTRLFSSVFGNREARILVLGLDNAGKTTILYRLQMGEVVST-------IPTIGFNVETV 56
Query: 64 EDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDL 123
+ N+K WDLGGQ +R W Y+ A+IYV+DS+ AK +L ++L
Sbjct: 57 QYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVTAKEEFHAILEEDEL 116
Query: 124 QGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEE 183
+G +L++ANKQ+LP A+ + + L L + R + SA G G+ G+DWL
Sbjct: 117 KGAVVLVYANKQDLPGALDDAAITESLELHKIKSRQWAIFKTSAIKGEGLFEGLDWLSNA 176
Query: 184 ME 185
++
Sbjct: 177 LK 178
>Os11g0586900 Similar to ADP-ribosylation factor-like protein 5
Length = 184
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 7/184 (3%)
Query: 8 LWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDAN 67
+W +F E+ +V++G+ AGKTT L K ++L E PT+G N+ + N
Sbjct: 8 VWFLMFPAKEYKIVVVGLDNAGKTTTLYK---LHLGEAVTA----APTIGSNVEEVVFKN 60
Query: 68 VKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGVP 127
++ WDLGGQ LRT W YY HAVI VIDS + K L ++L H DL+G
Sbjct: 61 IRFEVWDLGGQESLRTSWATYYRGTHAVIVVIDSTDRARINIIKDELFRLLQHGDLEGAV 120
Query: 128 LLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEMERS 187
+L+FANKQ+L A++ E+ L L + + QA A G G+ G+ W+ +++
Sbjct: 121 VLVFANKQDLKDAMSPAEITDALSLHSIKNHDWHIQASCAITGEGLYDGLGWIAQKVAGK 180
Query: 188 KRTE 191
T
Sbjct: 181 ATTS 184
>Os02g0327100 Similar to ARL2 G-protein
Length = 185
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 8/169 (4%)
Query: 17 EFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDANVKLVFWDLG 76
E ++++G+ +GKTT I LK G I PT+G NI I+ L WD+G
Sbjct: 16 EMRILMVGLDNSGKTT-------IVLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIG 68
Query: 77 GQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGVPLLIFANKQE 136
GQ +R+ W Y+E+ +++V+DS+ +D ++ L +L E L G LL+FANKQ+
Sbjct: 69 GQKTIRSYWRNYFEQTDGLVWVVDSSDIRRLDDCRAELHNLLKEERLAGASLLVFANKQD 128
Query: 137 LPAAVTEEELARHLHLKGLD-ERPYMFQAGSAYDGTGIKAGIDWLVEEM 184
+ A+ E+A+ L+L+ +D R + SA+ G G+ G DWLV+++
Sbjct: 129 IQGALKPSEIAKVLNLEAMDGSRHWQIVGCSAHTGEGLLQGFDWLVQDI 177
>Os10g0580200 Similar to ADP-ribosylation factor-like protein
Length = 192
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 1 MFSLFYGLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNI 60
M F L+ F E VV+LG+ AGKTT+L K +++ E VPT+G N+
Sbjct: 1 MGQAFRKLFDAFFGNKEMRVVMLGLDAAGKTTILYK---LHIGEV----LSTVPTIGFNV 53
Query: 61 GRIEDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHH 120
+++ NV WD+GGQ LR +W Y+ A+IYV+DS A++ + +++
Sbjct: 54 EKVQYKNVVFTVWDVGGQEKLRPLWRHYFNNTDALIYVVDSLDRERIGRARAEFQAIIND 113
Query: 121 EDLQGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWL 180
+ LL+FANKQ++ A+T E+ L L L+ R + Q A G G+ G+DWL
Sbjct: 114 PFMLNSVLLVFANKQDMRGAMTPMEVCEGLGLYDLNNRIWHIQGTCALKGDGLYEGLDWL 173
Query: 181 ---VEEMERSKR 189
++EM S R
Sbjct: 174 ATTLDEMRASGR 185
>Os02g0128600 Similar to ADP-ribosylation factor-like protein
Length = 194
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 7/183 (3%)
Query: 8 LWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDAN 67
L+ FS E VV+LG+ AGKTT+L ++ E L VPTVG N+ +++ N
Sbjct: 8 LFDAFFSTREMRVVMLGLDAAGKTTILYRLH----MGEVLS---TVPTVGFNVEKVQYKN 60
Query: 68 VKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGVP 127
V WD+GGQ LR +W+ Y + A+IYV+DS DA+ + ++ +
Sbjct: 61 VVFTVWDVGGQEKLRPLWKMYLSNSDALIYVVDSLDRERIIDARQEFQTIIKDPLMANSI 120
Query: 128 LLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEMERS 187
+L+FANKQ+L A++ +E++ L L L R + Q A G G+ G+DWL +++
Sbjct: 121 ILVFANKQDLRGAMSPDEVSEGLGLHDLRNRIWHIQGTCALRGEGLYDGLDWLASTLKQL 180
Query: 188 KRT 190
+ T
Sbjct: 181 QET 183
>Os06g0114200
Length = 189
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 13 FSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDANVKLVF 72
F E V++LG+ AGKTT+L ++ E L +PT+G N+ ++E NV
Sbjct: 12 FCTKEMKVLMLGLDAAGKTTILYRLHI----GEVLSS---IPTIGFNVEKVEYKNVAFTV 64
Query: 73 WDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGVPLLIFA 132
WD+GGQ LR +W +Y+ A A+IYV+DS AK + ++ + +L+ A
Sbjct: 65 WDVGGQDKLRPLWRQYFRNADALIYVVDSMDRERIGVAKEEFQAIIRDPLMLNSVILLLA 124
Query: 133 NKQELPAAVTEEELARHL-HLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEME 185
NKQ+L A++ E+ + L + L R + Q SA G G+ G+DWL +
Sbjct: 125 NKQDLKGAMSSSEVCQRLGAYEELKNRRWHCQGASALTGDGLHGGLDWLASTLR 178
>Os01g0338000 Similar to GTP-binding protein SAR1A
Length = 193
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 7 GLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDA 66
GLWQ E ++ LG+ AGKTTLL LK+E L + PT +
Sbjct: 15 GLWQK-----EAKILFLGLDNAGKTTLLH-----MLKDERLVQHQ--PTQHPTSEELSIG 62
Query: 67 NVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGV 126
+K +DLGG R +W+ YY + AV+Y++D+ F ++K L+ +L + L V
Sbjct: 63 KIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDDSLAAV 122
Query: 127 PLLIFANKQELPAAVTEEELARHLHLKGL 155
P LI NK ++P A +EEEL HL L
Sbjct: 123 PFLILGNKIDIPYAASEEELRYHLGLSNF 151
>Os01g0254000 Similar to NTGB2 (Fragment)
Length = 193
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 7 GLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDA 66
GLWQ E ++ LG+ AGKTTLL LK+E L + PT +
Sbjct: 15 GLWQK-----EAKILFLGLDNAGKTTLLH-----MLKDERLVQHQ--PTQYPTSEELSIG 62
Query: 67 NVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGV 126
+K +DLGG R +W+ YY + AV+Y++D+A F ++K L+ +L + L V
Sbjct: 63 KIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAADKERFAESKKELDALLADDSLATV 122
Query: 127 PLLIFANKQELPAAVTEEELARHLHLKGL 155
P LI NK ++P A +EEEL +L L
Sbjct: 123 PFLILGNKIDIPYAASEEELRYYLGLSNF 151
>Os12g0560300 Similar to NTGB2 (Fragment)
Length = 193
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 7 GLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDA 66
GLWQ E ++ LG+ AGKTTLL LK+E L + PT +
Sbjct: 15 GLWQK-----EAKILFLGLDNAGKTTLLH-----MLKDERLVQHQ--PTQYPTSEELSIG 62
Query: 67 NVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGV 126
+K +DLGG R +W+ YY + AV+Y++D+ F ++K L+ +L + L V
Sbjct: 63 KIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDSLATV 122
Query: 127 PLLIFANKQELPAAVTEEELARHLHLKGL 155
P LI NK ++P A +EEEL H+ L
Sbjct: 123 PFLILGNKIDIPYAASEEELRYHMGLSNF 151
>Os06g0225000 Similar to NTGB3 (Fragment)
Length = 194
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 18/152 (11%)
Query: 7 GLWQHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIV--PTVG-LNIGRI 63
GLWQ E ++ LG+ AGKTTL L +E L + PT L+IGRI
Sbjct: 16 GLWQK-----EAKILFLGLDNAGKTTLF-----YMLSQENLAVHQPTQHPTSEELSIGRI 65
Query: 64 EDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDL 123
+ +DLGG R +W YY + AV+YV+D+A F ++K L+ +L + L
Sbjct: 66 -----RFKAFDLGGHRIARRVWRDYYAQVDAVVYVVDAADRCRFAESKMELDALLSDDAL 120
Query: 124 QGVPLLIFANKQELPAAVTEEELARHLHLKGL 155
GVP L+ NK ++P AV E+EL +L L GL
Sbjct: 121 AGVPFLVLGNKIDIPYAVPEQELCYYLGLTGL 152
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,829,393
Number of extensions: 287739
Number of successful extensions: 755
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 745
Number of HSP's successfully gapped: 20
Length of query: 203
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 107
Effective length of database: 12,023,257
Effective search space: 1286488499
Effective search space used: 1286488499
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)