BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0697200 Os06g0697200|J090006D11
(308 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0697200 DEAD/DEAH box helicase domain containing protein 593 e-170
Os02g0150100 Similar to DEAD-box protein abstrakt 437 e-123
Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (... 171 7e-43
Os11g0599500 Similar to RNA helicase (Fragment) 170 1e-42
Os07g0202100 Similar to ATP-dependent RNA helicase ded1 165 5e-41
Os03g0805200 Similar to RNA helicase (Fragment) 161 5e-40
AK119751 161 5e-40
Os03g0708600 DEAD/DEAH box helicase, N-terminal domain cont... 154 7e-38
AK110107 152 4e-37
Os03g0308500 DEAD/DEAH box helicase, N-terminal domain cont... 147 7e-36
Os01g0549400 Similar to RNA helicase-like protein DB10 147 1e-35
AK107287 145 5e-35
AK111212 140 1e-33
Os11g0689400 WW/Rsp5/WWP domain containing protein 139 3e-33
Os01g0172200 WW/Rsp5/WWP domain containing protein 138 6e-33
Os08g0159900 DEAD/DEAH box helicase, N-terminal domain cont... 137 8e-33
Os07g0301200 Similar to RNA helicase (Fragment) 134 1e-31
Os12g0481100 Similar to RNA helicase 108 4e-24
Os03g0827700 Similar to ATP-dependent RNA helicase 105 4e-23
Os03g0669000 Similar to RNA helicase (Fragment) 104 7e-23
Os07g0660000 103 1e-22
Os07g0633500 DEAD/DEAH box helicase, N-terminal domain cont... 103 2e-22
Os08g0416100 DEAD/DEAH box helicase, N-terminal domain cont... 102 3e-22
AK068197 101 7e-22
Os07g0647900 DEAD/DEAH box helicase, N-terminal domain cont... 100 2e-21
Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (... 97 1e-20
Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (... 97 2e-20
Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 96 5e-20
Os02g0146600 Similar to Eukaryotic initiation factor 4A (eI... 95 8e-20
Os01g0164500 Similar to ATP-dependent RNA helicase-like pro... 94 1e-19
Os01g0618500 Similar to RNA helicase (Fragment) 92 5e-19
Os01g0618400 Similar to RNA helicase (Fragment) 90 2e-18
Os05g0110500 Similar to RNA helicase (Fragment) 88 6e-18
Os01g0549700 Similar to RNA helicase (Fragment) 88 9e-18
Os01g0550000 DEAD/DEAH box helicase, N-terminal domain cont... 88 9e-18
Os02g0826100 Similar to RNA helicase (Fragment) 86 4e-17
Os04g0533000 Similar to RNA helicase (Fragment) 84 1e-16
Os02g0641800 Similar to RNA helicase (Fragment) 82 3e-16
Os10g0503700 Similar to RNA helicase (Fragment) 79 4e-15
Os09g0520700 Similar to RNA helicase 77 2e-14
Os01g0184500 DEAD/DEAH box helicase, N-terminal domain cont... 76 3e-14
>Os06g0697200 DEAD/DEAH box helicase domain containing protein
Length = 308
Score = 593 bits (1529), Expect = e-170, Method: Compositional matrix adjust.
Identities = 292/308 (94%), Positives = 292/308 (94%)
Query: 1 MELSFLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP 60
MELSFLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP
Sbjct: 1 MELSFLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP 60
Query: 61 EKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFC 120
EKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFC
Sbjct: 61 EKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFC 120
Query: 121 EHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIP 180
EHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIP
Sbjct: 121 EHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIP 180
Query: 181 DIQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRL 240
DIQHVINYDMPAEIENYVH FINKNQTETTLLDLKQLLIESKQRL
Sbjct: 181 DIQHVINYDMPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRL 240
Query: 241 PPILADLDDPQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLARARSDYFG 300
PPILADLDDPQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLARARSDYFG
Sbjct: 241 PPILADLDDPQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLARARSDYFG 300
Query: 301 GGGYRGEI 308
GGGYRGEI
Sbjct: 301 GGGYRGEI 308
>Os02g0150100 Similar to DEAD-box protein abstrakt
Length = 460
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/277 (77%), Positives = 240/277 (86%), Gaps = 1/277 (0%)
Query: 16 LHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPI 75
L RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP+KIQNFAKSALVKP+
Sbjct: 169 LDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPV 228
Query: 76 IVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFCEHKADVDYIQEFLLL 135
IVNVGRAGAANLDVIQEVEYVKE+ARIIYLLECLQKTPPPVLVFCE+KADVDYI E+LLL
Sbjct: 229 IVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLL 288
Query: 136 KGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIE 195
KGVEAVAIHGGKD EER++A + FK +KDVLVATDVASKGLD PDIQHVINYDMPAEIE
Sbjct: 289 KGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 348
Query: 196 NYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPILADLDDPQEDDK 255
NYVH FINKNQTETTLLDLK LL E+KQR+PP+LA+L+DP ED++
Sbjct: 349 NYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEE 408
Query: 256 VAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLA 292
+A++SGVKGCA+CGGLGHR+ CPK + Q S+ +A
Sbjct: 409 -TMAKESGVKGCAYCGGLGHRVTDCPKLEHQKSMAIA 444
>Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 484
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 138/243 (56%), Gaps = 15/243 (6%)
Query: 16 LHMSRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPEKIQNFAKSAL 71
L +YL +DEADR++D+GFE IR++ + K+ RQT+LFSAT P +IQ A L
Sbjct: 122 LEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFL 181
Query: 72 VKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTP----------PPVLVFCE 121
I + VGR G++ ++Q+VE + + + YLL+ LQ+ P LVF E
Sbjct: 182 SNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVE 241
Query: 122 HKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPD 181
K + D ++ +L KG A AIHG + +ER+ A +SFK ++VATDVAS+GLD+P+
Sbjct: 242 TKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPN 301
Query: 182 IQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLP 241
+ HVINYD+P IE+YVH F ++ + L +L+ E+KQ +P
Sbjct: 302 VAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESD-HSLAKGLLELMTEAKQDVP 360
Query: 242 PIL 244
L
Sbjct: 361 DWL 363
>Os11g0599500 Similar to RNA helicase (Fragment)
Length = 623
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 141/253 (55%), Gaps = 13/253 (5%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMP 60
+D L L RYL LDEADR++D+GFE +R + + RQT+LFSAT P
Sbjct: 296 LVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATFP 355
Query: 61 EKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQK--------T 112
++IQ A L I + VGR G++ ++Q VE+V+E + +L++ L
Sbjct: 356 KEIQRMASDFLENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSATPGK 415
Query: 113 PPPVLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDV 172
P LVF E K D ++ +L + G A +IHG ++ +ER+ A +SFK+ +LVATDV
Sbjct: 416 PTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDV 475
Query: 173 ASKGLDIPDIQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQL 232
A++GLDIP + HV+N+D+P +I++YVH F N+N + + L +L
Sbjct: 476 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNS-SMARSLAEL 534
Query: 233 LIESKQRLPPILA 245
+ ES Q +P L+
Sbjct: 535 MQESNQEVPAWLS 547
>Os07g0202100 Similar to ATP-dependent RNA helicase ded1
Length = 638
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 139/252 (55%), Gaps = 13/252 (5%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMP 60
+D L L M +YL LDEADR++D+GFE IR++ + + +RQT+LFSAT P
Sbjct: 308 LMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGERQTMLFSATFP 367
Query: 61 EKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPP----- 115
++IQ A L I + VGR G++ ++Q VE+V + + YL++ L
Sbjct: 368 KEIQRMASDFLADYIFLAVGRVGSSTDLIVQRVEFVLDADKRSYLMDLLHAQRANGTHGK 427
Query: 116 ---VLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDV 172
LVF E K D ++ +L G A +IHG + +ER+ A +SFK+ +LVATDV
Sbjct: 428 QALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDV 487
Query: 173 ASKGLDIPDIQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQL 232
A++GLDIP + HVIN+D+P +I++YVH F N++ T L +L
Sbjct: 488 AARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLA-RPLSEL 546
Query: 233 LIESKQRLPPIL 244
+ E+ Q +P L
Sbjct: 547 MQEANQEVPQWL 558
>Os03g0805200 Similar to RNA helicase (Fragment)
Length = 637
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 136/252 (53%), Gaps = 13/252 (5%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMP 60
+D L L M +YL LDEADR++D+GFE IR++ + + RQT+LFSAT P
Sbjct: 313 LMDLLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFP 372
Query: 61 EKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPP----- 115
++IQ A L I + VGR G++ + Q VE+V E + YL++ L
Sbjct: 373 KEIQRMASDFLADYIFLAVGRVGSSTDLIAQRVEFVLEADKRSYLMDLLHAQKANGTHGK 432
Query: 116 ---VLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDV 172
LVF E K D ++ +L G A +IHG + +ER+ A +SFK+ +LVATDV
Sbjct: 433 QALTLVFVETKRGADALENWLYTNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDV 492
Query: 173 ASKGLDIPDIQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQL 232
A++GLDIP + HVIN+D+P +I++YVH F N+ + L +L
Sbjct: 493 AARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNL-SLARPLCEL 551
Query: 233 LIESKQRLPPIL 244
+ E+ Q +P L
Sbjct: 552 MQEANQEVPQWL 563
>AK119751
Length = 628
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 136/232 (58%), Gaps = 5/232 (2%)
Query: 20 RYLTLDEADRLVDLGFEDDIREVFDH----FKAQRQTLLFSATMPEKIQNFAKSALVKPI 75
RYL LDEADR++D+GFE IR + + QRQT+LFSAT P++IQ A L I
Sbjct: 318 RYLALDEADRMLDMGFEPQIRRIVEGEDMPPTGQRQTMLFSATFPKEIQRLAADFLHDYI 377
Query: 76 IVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFCEHKADVDYIQEFLLL 135
+ VGR G++ + Q +EYV+++ + +L+C+ LVF E K D ++++LL
Sbjct: 378 FLTVGRVGSSTDLIAQHIEYVQQDQKRETVLDCVNTVEGLTLVFVETKRGADQLEDYLLR 437
Query: 136 KGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIE 195
+ + A +I G K ER+ A ++F++ + +LVATDVA++GLDIP + HVINYD+P +I+
Sbjct: 438 QNLPATSIRGDKSQAEREMALRAFRSGKCRILVATDVAARGLDIPHVTHVINYDLPKDID 497
Query: 196 NYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPILADL 247
+YVH F + L+++L E+ Q +P LA++
Sbjct: 498 DYVHRIGRTGRAGKKGLATAFFTDDDFGLA-RSLQEVLSETGQEVPGWLANI 548
>Os03g0708600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 736
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 19/259 (7%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQ--------------- 49
LD L L+ Y+ LDEADR++D+GFE + V D +
Sbjct: 452 LLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDAKT 511
Query: 50 --RQTLLFSATMPEKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLE 107
R T +FSATMP ++ A+ L P++V +G AG A + Q V KE ++ L +
Sbjct: 512 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMTKESEKMSRLQK 571
Query: 108 CLQK-TPPPVLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDV 166
L P +VFC K D + L G +HGGK E+R+ + F+ V
Sbjct: 572 ILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSLDGFRNRRFTV 631
Query: 167 LVATDVASKGLDIPDIQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTL 226
LVATDVA +G+DIPD+ HVINY+MP+ I+ Y H F+ T+
Sbjct: 632 LVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTD-IF 690
Query: 227 LDLKQLLIESKQRLPPILA 245
DLKQ+LI+S +PP LA
Sbjct: 691 FDLKQMLIQSNSPVPPELA 709
>AK110107
Length = 671
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 131/230 (56%), Gaps = 6/230 (2%)
Query: 20 RYLTLDEADRLVDLGFEDDIREVF---DHFKAQ-RQTLLFSATMPEKIQNFAKSALVKPI 75
+YL LDEADR++D+GFE IR + D Q RQTL+FSAT P IQ A+ L I
Sbjct: 341 KYLVLDEADRMLDMGFEPQIRRIVEGEDMPNVQDRQTLMFSATSPRDIQMLARDFLKDYI 400
Query: 76 IVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPV-LVFCEHKADVDYIQEFLL 134
++VGR G+ + ++ Q+VEYV++ + LL+ L + L+F E K D + +FL+
Sbjct: 401 FLSVGRVGSTSENITQKVEYVEDVDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLI 460
Query: 135 LKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEI 194
+ A +IHG + ER+ A + F+ +LVAT VA++GLDIP++ HV+NYD+P +I
Sbjct: 461 NQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDI 520
Query: 195 ENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPIL 244
++YVH F N+ + +L LL E+ Q +P L
Sbjct: 521 DDYVHRIGRTGRAGNTGHSTAFFNRG-NRGVVRELLDLLKEANQEVPAFL 569
>Os03g0308500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 770
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 118/198 (59%), Gaps = 3/198 (1%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQ 64
+D L + + + YL LDEADR+ DLGFE IR + + RQTLLFSATMP K++
Sbjct: 353 LIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVE 412
Query: 65 NFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEA-RIIYLLECLQKT--PPPVLVFCE 121
A+ L PI V VG+ G+AN D+ Q V + +A ++ +LLE L VLVF
Sbjct: 413 RLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAA 472
Query: 122 HKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPD 181
KA VD I+ L +G A+HG KD R + + FK+ VLVATDVA++GLDI
Sbjct: 473 KKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLDIKS 532
Query: 182 IQHVINYDMPAEIENYVH 199
I+ V+N+D+ E++ ++H
Sbjct: 533 IKTVVNFDIAKEMDMHIH 550
>Os01g0549400 Similar to RNA helicase-like protein DB10
Length = 792
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 131/247 (53%), Gaps = 13/247 (5%)
Query: 12 LNNFLHMSR-------YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQ 64
LN+ L M R YL LDEADR++D+GFE IR++ +RQTL+++AT P++++
Sbjct: 283 LNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVR 342
Query: 65 NFAKSALVKPIIVNVGRAG--AANLDVIQEVEYVKEEARIIYLLECL--QKTPPPVLVFC 120
A+ LV P+ V +G AN + Q VE + ++ L + L Q + VL+FC
Sbjct: 343 RIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFC 402
Query: 121 EHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIP 180
K D + L + A AIHG K ER+ F++ +LVATDVA++GLDI
Sbjct: 403 TTKRMCDQLAR-TLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIK 461
Query: 181 DIQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRL 240
DI+ VINYD P IE+YVH F +Q DL ++L + QR+
Sbjct: 462 DIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFC-DQDSKYAADLIKILEGANQRV 520
Query: 241 PPILADL 247
P LAD+
Sbjct: 521 PRDLADM 527
>AK107287
Length = 554
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 5/241 (2%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQ 64
+D ++ L YL +DEADR++D+GFE IR++ + RQTL+FSAT P+++Q
Sbjct: 267 LIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEVQ 326
Query: 65 NFAKSALVKPIIVNVGRAG-AANLDVIQEVEYVKE---EARIIYLLECLQKTPPPVLVFC 120
A L VN+G AAN +V Q +E E + ++I LE + + V++F
Sbjct: 327 RLAGDFLNDFAQVNIGSTELAANHNVKQIIEVCSEFEKKGKLIGHLETISQENGKVIIFT 386
Query: 121 EHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIP 180
K D + ++L G A+AIHG K +ER FK+ ++VAT VAS+GLD+
Sbjct: 387 STKRVADDLTKYLRQDGWPALAIHGDKQQQERDWVLAEFKSGRSPIMVATAVASRGLDVK 446
Query: 181 DIQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRL 240
DI +VINYD P E+YVH F +++ +L +L E+KQ +
Sbjct: 447 DISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTFFTPENSKSA-RELVGILREAKQEI 505
Query: 241 P 241
P
Sbjct: 506 P 506
>AK111212
Length = 545
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 127/249 (51%), Gaps = 8/249 (3%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQ 64
+D L L YL LDEADR++D+GFE IR++ + RQTL +SA P++++
Sbjct: 271 LIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLTWSAAWPKEVR 330
Query: 65 NFAKSALVKPIIVNVGRAG-AANLDVIQEVEYV----KEEARIIYLLECLQKTPPPVLVF 119
A L I VN+G AAN + Q VE V K + I +L + ++ +L+F
Sbjct: 331 ALASDFLNDFIQVNIGSMELAANHRITQIVEVVTDMEKRDRMIKHLEKTMENKENKILIF 390
Query: 120 CEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDI 179
K D I FL G A++IHG K ER FK + ++VATDVAS+G+D+
Sbjct: 391 VGTKRIADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDV 450
Query: 180 PDIQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXX-FINKNQTETTLLDLKQLLIESKQ 238
+I HV+NYD P E+Y+H F NQ + DL +L E+KQ
Sbjct: 451 RNITHVLNYDYPHNSEDYIHRIGRTGRAGAKGTAITLFTTDNQKQAR--DLVNVLTEAKQ 508
Query: 239 RLPPILADL 247
++ P L ++
Sbjct: 509 QIDPRLVEM 517
>Os11g0689400 WW/Rsp5/WWP domain containing protein
Length = 1398
Score = 139 bits (349), Expect = 3e-33, Method: Composition-based stats.
Identities = 93/278 (33%), Positives = 138/278 (49%), Gaps = 9/278 (3%)
Query: 7 DYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNF 66
D L + LH +L LDEADR++D+GFE IR++ D RQTL+++AT P+++
Sbjct: 739 DILEMRKISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKI 798
Query: 67 AKSALVKPIIVNVGRAG--AANLDVIQEVEYV---KEEARIIYLLECLQKTPPPVLVFCE 121
A L P+ VN+G AN + Q VE V ++ R+ +L Q+ V++FC
Sbjct: 799 AGDLLKDPVQVNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRA-QERGSKVIIFCS 857
Query: 122 HKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPD 181
K D + + + A +IHG K ER + F+ +LVATDVA++GLDI D
Sbjct: 858 TKKMCDQLARDIG-RSFGAASIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDIKD 916
Query: 182 IQHVINYDMPAEIENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLP 241
I+ VINYD P IE+YVH F ++ Q DL ++L + Q +P
Sbjct: 917 IRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSE-QDWKYAGDLVKVLEGANQHVP 975
Query: 242 PILADLDDPQEDDKVAIAQQSGVKGCAFCGGLGHRIEA 279
P L ++ Q G+ GG G+R E+
Sbjct: 976 PELQEMAARGAAGAPR-NQAGGMSRWDGPGGGGNRFES 1012
>Os01g0172200 WW/Rsp5/WWP domain containing protein
Length = 759
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 7 DYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNF 66
D L + LH YL LDEADR++D+GFE IR++ + +RQTL+F+AT P++++
Sbjct: 366 DILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKI 425
Query: 67 AKSALVKPIIVNVGRAG--AANLDVIQEVEYVKEEARIIYLLECLQKTPP--PVLVFCEH 122
A L P+ VN+G AN + Q V+ + + L + L+ P +++FC
Sbjct: 426 ASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCST 485
Query: 123 KADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDI 182
K D + L + A AIHG K ER F++ +LVATDVA++GLDI DI
Sbjct: 486 KRMCDQLARN-LARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDI 544
Query: 183 QHVINYDMPAEIENYVH 199
+ V+NYD P +E+YVH
Sbjct: 545 RVVVNYDFPTGVEDYVH 561
>Os08g0159900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1049
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 125/236 (52%), Gaps = 3/236 (1%)
Query: 16 LHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPI 75
L +L +DEADR+ D+GFE I + + + RQT+LFSAT P +++ A+ L KP+
Sbjct: 572 LRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPV 631
Query: 76 IVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKT--PPPVLVFCEHKADVDYIQEFL 133
+ VG N D+ Q VE E R LLE L + +LVF + D + + L
Sbjct: 632 EIQVGGRSVVNKDITQLVEVRPENERFFRLLELLGEWFDKGKILVFVHSQDKCDSLLKDL 691
Query: 134 LLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAE 193
G +++HGGKD +R+ FK++ +L+AT VA++GLD+ +++ V+NYD+P
Sbjct: 692 FQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAARGLDVKELELVVNYDVPNH 751
Query: 194 IENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPILADLDD 249
E+YVH FI++ + E DL + L S+Q +P L L D
Sbjct: 752 YEDYVHRVGRTGRAGRKGFAVTFISEEE-ERYAPDLVKALELSEQAVPEDLKGLAD 806
>Os07g0301200 Similar to RNA helicase (Fragment)
Length = 512
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 125/230 (54%), Gaps = 7/230 (3%)
Query: 21 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSAL-VKPIIVNV 79
++ LDEADR++D+GFE ++R + + RQT++FSAT P + A+ + PI V +
Sbjct: 244 FVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVVI 303
Query: 80 GRAG-AANLDVIQEVEYV---KEEARIIYLLECLQKTPP-PVLVFCEHKADVDYIQEFLL 134
G AAN DV+Q VE + ++R++ LL+ K VLVF +K + ++ L
Sbjct: 304 GSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQ 363
Query: 135 LKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEI 194
+G AV++HG K +R A FK +++ATDVAS+GLDIPD++ VINY P
Sbjct: 364 RRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTT 423
Query: 195 ENYVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPIL 244
E+YVH F + + + +L +L E+ Q +PP L
Sbjct: 424 EDYVHRIGRTGRAGKKGVAHTFFTQ-ENKGLAGELVNVLREAGQVVPPAL 472
>Os12g0481100 Similar to RNA helicase
Length = 832
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 110/202 (54%), Gaps = 9/202 (4%)
Query: 5 FLDYL-NVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKI 63
+D+L N L+ L L LDEADRL++LGF +I+E+ +RQT+LFSATM E+I
Sbjct: 356 IIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCPRRRQTMLFSATMTEEI 415
Query: 64 QNFAKSALVKPIIV----NVGRAGAANLDV--IQEVEYVKEEARIIYLLECLQKTPPPVL 117
+L KP+ + ++ R +V I+ +EA ++ L CL+ V+
Sbjct: 416 NELVTLSLNKPVRLEADPSLKRPATLTEEVVRIRRAREANQEAVLLAL--CLKTFKDKVI 473
Query: 118 VFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGL 177
+F K ++ L G++A +HG +R +A + FK E D L+ATDVA++G+
Sbjct: 474 IFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGI 533
Query: 178 DIPDIQHVINYDMPAEIENYVH 199
DI ++ VIN+ P + Y+H
Sbjct: 534 DIVGVRTVINFSCPRDARTYLH 555
>Os03g0827700 Similar to ATP-dependent RNA helicase
Length = 723
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 25/209 (11%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQ 64
+D +N + L +YL LDEAD+++ +GFE+D+ + A+RQ++LFSATMP ++
Sbjct: 204 IIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVK 263
Query: 65 NFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVL------- 117
++ L P+ + D++ + + E +Y + + VL
Sbjct: 264 KLSRRYLNNPLTI----------DLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVY 313
Query: 118 -------VFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVAT 170
VF + K D D + L + + A+HG +R+ F+ + VLVAT
Sbjct: 314 AKGGKTIVFTKTKRDADEVS-LALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVAT 372
Query: 171 DVASKGLDIPDIQHVINYDMPAEIENYVH 199
DVA++GLDIP++ +I+Y++P + E +VH
Sbjct: 373 DVAARGLDIPNVDLIIHYELPNDPETFVH 401
>Os03g0669000 Similar to RNA helicase (Fragment)
Length = 472
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Query: 5 FLDYLNVLNNF-LHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKI 63
LD+L F L+ +YL LDEAD+L+++ F+ + ++ + +R+T LFSATM K+
Sbjct: 172 LLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTFLFSATMTNKV 231
Query: 64 QNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPP-VLVFCEH 122
++ L P+ V V + + QE +V + + +L+ L + P +++F
Sbjct: 232 SKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRT 291
Query: 123 KADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDI 182
+ L +A++I G ++R A FK + ++L+ TDVAS+GLDI +
Sbjct: 292 CESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGV 351
Query: 183 QHVINYDMPAEIENYVH 199
VINYD+P ++YVH
Sbjct: 352 DVVINYDIPMNSKDYVH 368
>Os07g0660000
Length = 444
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Query: 5 FLDYLNVLNNF-LHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKI 63
LD+L F + +YL LDEAD L+ + F+ + ++ + +R+T LFSATM EK+
Sbjct: 144 LLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKV 203
Query: 64 QNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPP-VLVFCEH 122
+ ++ L P+ V V + + Q++ V + + YL+ L K P ++VF
Sbjct: 204 KKLRRACLKNPVKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRT 263
Query: 123 KADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDI 182
+ L +A++I G ++R A F+ + ++LV TDVAS+GLDI +
Sbjct: 264 CESTRLLALMLRNLRFKAISISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGV 323
Query: 183 QHVINYDMPAEIENYVH 199
VINYD P ++Y+H
Sbjct: 324 DVVINYDFPLNSKDYIH 340
>Os07g0633500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 501
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 19 SRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVN 78
+++L LDEADR++D+ FE+D+R +F +RQT LFSAT+ + +++ + +
Sbjct: 223 TKFLVLDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATISDNLRSLLELSGNNSYFFE 282
Query: 79 VGRAGAANLDVIQEVE-YVKEEARIIYLLECLQKTPP----PVLVFCEHKADVDYIQEFL 133
G +D ++++ +V +A+ +YL L K V+VF Y+ L
Sbjct: 283 -AYEGFKTVDTLKQLYIHVPPDAKELYLFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLL 341
Query: 134 LLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAE 193
G AV++H K R A +FK+S+ VL+ATDVAS+GLDI + VINYD+P
Sbjct: 342 EELGHPAVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYDVPRY 401
Query: 194 IENYVH 199
+Y+H
Sbjct: 402 PRDYIH 407
>Os08g0416100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 851
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 16 LHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPI 75
L Y+ DEAD L LG + ++ RQTLLFSAT+P+ + +FAK+ L P
Sbjct: 192 LRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTLLFSATLPQALADFAKAGLRDPQ 251
Query: 76 IVNVGRAGAANLDVIQEVEYVKEE---ARIIYLLECLQKTPPPVLVFCEHKADVDYIQEF 132
IV + + D+ +++E A ++YL+ + ++F K V+++
Sbjct: 252 IVRLDLDKKISPDLKLAFFTLRQEEKLAALLYLVRERISSEEQTIIFVSTKHHVEFLNIL 311
Query: 133 LLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPA 192
+G+E +G D E R F+A + +L+ TDVA++GLDIP + +V+N+D PA
Sbjct: 312 FREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAARGLDIPLLDNVVNWDFPA 371
Query: 193 EIENYVH 199
+ + +VH
Sbjct: 372 KPKLFVH 378
>AK068197
Length = 181
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 21 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNVG 80
YL LDEADR++D+GFE IR++ + RQTL +SAT P ++++ A+ L P V +G
Sbjct: 10 YLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIG 69
Query: 81 RAG-AANLDVIQEVEYVKEEARIIYLLECLQKT--PPPVLVFCEHKADVDYIQEFLLLKG 137
AN + Q +E + E + L + L +L+F + K D D + L + G
Sbjct: 70 SPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDG 129
Query: 138 VEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDI 179
A++IHG K ER FK+ + ++ ATDVA++GL +
Sbjct: 130 WPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLGM 171
>Os07g0647900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 540
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 16 LHMSR--YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTL-LFSATMPEKIQNFAKSALV 72
L +SR YL LDE+D+L +LGF + I V LFSAT+P+ I+ A++ +
Sbjct: 283 LDLSRVEYLVLDESDKLFELGFVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMH 342
Query: 73 KPIIVNVGRAGAANLDVIQEVEYV-KEEARIIYLLECLQKT-PPPVLVFCEHKADVDYIQ 130
+ V VGR +A+ + Q++ + E+ +++ L + ++ PPVL+F + K +
Sbjct: 343 DAVRVIVGRKNSASSLIKQKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELY 402
Query: 131 EFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDM 190
+ L V A IH D+E+R+DA + +A + VL+AT+V ++G+D + VINYD
Sbjct: 403 KELAFDDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDF 462
Query: 191 PAEIENYVH 199
P Y+H
Sbjct: 463 PESASAYIH 471
>Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 5/231 (2%)
Query: 20 RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNV 79
+ L LDEAD ++ GF+D I +V+ + + Q L SAT+P +I + P+ + V
Sbjct: 175 KLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILV 234
Query: 80 GRAGAANLDVIQE--VEYVKEEARIIYLLECLQK-TPPPVLVFCEHKADVDYIQEFLLLK 136
R L+ I++ V KEE + L + T ++FC K VD++ E +
Sbjct: 235 KR-DELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSN 293
Query: 137 GVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIEN 196
A+HG +ER F++ VL+ TDV ++GLD+ + VINYD+P E
Sbjct: 294 NFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNREL 353
Query: 197 YVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPILADL 247
Y+H F+ K L D++Q +P +ADL
Sbjct: 354 YIHRIGRSGRFGRKGVAINFVKKEDIR-ILRDIEQYYSTQIDEMPMNVADL 403
>Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 5/231 (2%)
Query: 20 RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNV 79
+ L LDEAD ++ GF+D I +V+ + + Q L SAT+P +I + P+ + V
Sbjct: 175 KLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILV 234
Query: 80 GRAGAANLDVIQE--VEYVKEEARIIYLLECLQK-TPPPVLVFCEHKADVDYIQEFLLLK 136
R L+ I++ V KEE + L + T ++FC K VD++ E +
Sbjct: 235 KR-DELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSN 293
Query: 137 GVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIEN 196
A+HG +ER F++ VL+ TDV ++GLD+ + VINYD+P E
Sbjct: 294 NFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNREL 353
Query: 197 YVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPILADL 247
Y+H F+ K L D++Q +P +ADL
Sbjct: 354 YIHRIGRSGRFGRKGVAINFVKKEDIR-ILRDIEQYYSTQIDEMPMNVADL 403
>Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 5/231 (2%)
Query: 20 RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNV 79
+ LDEAD ++ GF+D I ++F ++ Q +FSATMP + + + KP+ + V
Sbjct: 185 KMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILV 244
Query: 80 GRAGAANLDVIQE--VEYVKEEARIIYLLECLQKTP-PPVLVFCEHKADVDYIQEFLLLK 136
R L+ I++ V KEE ++ L + + ++F + VD++ + + +
Sbjct: 245 KR-DELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGR 303
Query: 137 GVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIEN 196
A HG D R + F++ VL+ TD+ ++G+D+ + VINYD+P + EN
Sbjct: 304 DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN 363
Query: 197 YVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPILADL 247
Y+H F+ ++ E L D+++ + LP +ADL
Sbjct: 364 YLHRIGRSGRFGRKGVAINFVTRDD-ERMLFDIQRFYNVVIEELPANVADL 413
>Os02g0146600 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 5/231 (2%)
Query: 20 RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNV 79
+ LDEAD ++ GF+D I ++F + Q +FSATMP + + + KP+ + V
Sbjct: 185 KMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILV 244
Query: 80 GRAGAANLDVIQE--VEYVKEEARIIYLLECLQKTP-PPVLVFCEHKADVDYIQEFLLLK 136
R L+ I++ V KE+ ++ L + + ++F + VD++ + + +
Sbjct: 245 KR-DELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSR 303
Query: 137 GVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIEN 196
A HG D R + F++ VL+ TD+ ++G+D+ + VINYD+P + EN
Sbjct: 304 DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN 363
Query: 197 YVHXXXXXXXXXXXXXXXXFINKNQTETTLLDLKQLLIESKQRLPPILADL 247
Y+H F+ ++ E L D+++ + + LP +ADL
Sbjct: 364 YLHRIGRSGRFGRKGVAINFVTRDD-ERMLFDIQRFYNVTIEELPANVADL 413
>Os01g0164500 Similar to ATP-dependent RNA helicase-like protein
Length = 647
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 6 LDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQN 65
LD LN N L LDEADRL+DLGF+ I + R+T LFSAT E ++
Sbjct: 166 LDTLNYKN-----LEILILDEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEAVKE 220
Query: 66 FAKSALVKPIIVNV-------GRAGA------ANLDVIQEVEYVKEEA--RIIYLLECL- 109
AK+ L P+ V V G+ GA + + +EY+ EA + L++ L
Sbjct: 221 LAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLEYMICEASNKSSQLVDFLV 280
Query: 110 QKTPPPVLVFCEHKADVDYIQEFL----LLKGVEAVAIHGGKDDEERKDAFKSFKASEKD 165
Q ++V+ A VDY L LKG + HG R+ A SF A
Sbjct: 281 QNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIPYHGKMKQGPREKALASFSALSSG 340
Query: 166 VLVATDVASKGLDIPDIQHVINYDMPAEIENYVH 199
+LV TDVA++GLDIP + ++ YD P + ++H
Sbjct: 341 ILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIH 374
>Os01g0618500 Similar to RNA helicase (Fragment)
Length = 536
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 12 LNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSAL 71
+N + + L LDEADRL+D+GF DI ++ +RQTLLFSAT+PE+++ + A+
Sbjct: 217 FSNRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIPKERQTLLFSATVPEEVRQISHIAM 276
Query: 72 VKPI-IVNVGRAG--AANLDVIQEVEYVKEEARIIYLLECLQK-----TPPPVLVFCEHK 123
+ +N + G + V Q + L L+K V+VFC
Sbjct: 277 KRGYKFINTVKEGDEETHSQVSQMYMVAPLDLHFSILYNVLKKHIAEDADYKVIVFCTTA 336
Query: 124 ADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQ 183
+ E L + IH K R F+ S+ +LV++DV+++G+D PD+
Sbjct: 337 MVTKLVAEVLSQLKLNIREIHSRKSQSARTKVSDEFRKSKGLILVSSDVSARGVDYPDVT 396
Query: 184 HVINYDMPAEIENYVH 199
VI +PA+ E Y+H
Sbjct: 397 LVIQVGLPADREQYIH 412
>Os01g0618400 Similar to RNA helicase (Fragment)
Length = 594
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 8/188 (4%)
Query: 20 RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPI-IVN 78
+ L LDEADRL+D+GF DI + +RQTLLFSAT+PE+++ + A+ K +N
Sbjct: 283 KVLVLDEADRLLDMGFRRDIERIIASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFIN 342
Query: 79 VGRAG--AANLDVIQEVEYVKEEARIIYLLECLQKTPP-----PVLVFCEHKADVDYIQE 131
+ G + V Q + L + L+K V++FC + E
Sbjct: 343 TVKDGDEETHAQVSQMFMIAPLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAE 402
Query: 132 FLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMP 191
L + IH K R F+ S +LV++DV+++G+D PD+ VI +P
Sbjct: 403 ILSQLRLNIREIHSRKSQSARTKVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVP 462
Query: 192 AEIENYVH 199
A+ + Y+H
Sbjct: 463 ADRQQYIH 470
>Os05g0110500 Similar to RNA helicase (Fragment)
Length = 591
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 78/270 (28%)
Query: 5 FLDYLNVLNNFLHMS-RYLTLDEADRLVDLGFEDDIREVFDHFKA--------------- 48
LD+L ++F++ + R++ DEAD +++LGF + ++ +H +
Sbjct: 160 LLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPM 219
Query: 49 QRQTLLFSATMPEKIQNFAKSALVKPIIVNVGRAGAA---------------------NL 87
+RQ LL SAT+ EK+ AK +L P+++ + ++ N+
Sbjct: 220 KRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTSLLSDDEEEILEKHNV 279
Query: 88 DVIQEVE-----------YVKEE--ARIIYLLECLQ-----KTPPPVLVF---CEH---- 122
V Q V+ YVK +R+ LL L+ + V+VF C+
Sbjct: 280 TVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFH 339
Query: 123 -------------KADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVA 169
+ D D Q+F+ K +HG D ++RK +F F + + +LV+
Sbjct: 340 HTVLSQLEWSPGLQLDTDKKQKFISCK---VFRLHGNMDQDDRKKSFLGFSSEKSAILVS 396
Query: 170 TDVASKGLDIPDIQHVINYDMPAEIENYVH 199
TDVA++GLD P ++ +I YD P E YVH
Sbjct: 397 TDVAARGLDFPKVKCIIQYDSPGEASEYVH 426
>Os01g0549700 Similar to RNA helicase (Fragment)
Length = 432
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 20 RYLTLDEADRLVD-LGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVN 78
R+ LDE D+++D L D++E+F +Q ++FSAT+ ++I+ K + P+ +
Sbjct: 197 RHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 256
Query: 79 VGRAGAANLDVIQEVEYVK-----EEARIIYLLECLQKTPPPVLVFCEHKADVDYIQEFL 133
V L + + Y+K + ++ LL+ L V++F + + + + L
Sbjct: 257 VDDEAKLTLHGLVQ-HYIKLSEAEKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELNKLL 313
Query: 134 LLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAE 193
A++IH G EER +K+FK K +LVATD+ +G+DI + VINYDMP
Sbjct: 314 CECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDS 373
Query: 194 IENYVH 199
++Y+H
Sbjct: 374 ADSYLH 379
>Os01g0550000 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 432
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 20 RYLTLDEADRLVD-LGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVN 78
R+ LDE D+++D L D++E+F +Q ++FSAT+ ++I+ K + P+ +
Sbjct: 197 RHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 256
Query: 79 VGRAGAANLDVIQEVEYVK-----EEARIIYLLECLQKTPPPVLVFCEHKADVDYIQEFL 133
V L + + Y+K + ++ LL+ L V++F + + + + L
Sbjct: 257 VDDEAKLTLHGLVQ-HYIKLSEAEKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELNKLL 313
Query: 134 LLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAE 193
A++IH G EER +K+FK K +LVATD+ +G+DI + VINYDMP
Sbjct: 314 CECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDS 373
Query: 194 IENYVH 199
++Y+H
Sbjct: 374 ADSYLH 379
>Os02g0826100 Similar to RNA helicase (Fragment)
Length = 811
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 5 FLDYLNVLNNF---LHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPE 61
LD++ ++F L + L LDEAD L+DLGF DI ++ D QRQTLLFSAT+P+
Sbjct: 481 LLDHIENKSSFSVRLMGLKLLVLDEADHLLDLGFRTDIEKIVDSLPRQRQTLLFSATIPK 540
Query: 62 KIQNFAKSALVKP--IIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECL------QKTP 113
+++ ++ L + + VG ++++ V +++ L Q+
Sbjct: 541 EVRRVSQLVLKRDHVFVDTVGLGAVETPTKVEQLYLVMPHELHFHMVYRLLREHIDQEVD 600
Query: 114 PPVLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVA 173
V+VFC +++ L + IH K R + F+ S + +LV +DV+
Sbjct: 601 YKVIVFCTTAMVTEFMYIMLRDLKLNVREIHSRKPQLYRTRISEEFRDSSRLILVTSDVS 660
Query: 174 SKGLDIPDIQHVINYDMPAEIENYVH 199
++G++ P + VI +P++ E+Y+H
Sbjct: 661 TRGVNYPGVTLVIQVGVPSDREHYIH 686
>Os04g0533000 Similar to RNA helicase (Fragment)
Length = 498
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 22 LTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNVGR 81
L +DEAD+L+ F+ I+E+ + + RQ L+FSAT P ++ F L KP ++N+
Sbjct: 270 LVMDEADKLLSPEFQPSIQELIRYLPSNRQILMFSATFPVTVKEFKDKYLPKPYVINL-- 327
Query: 82 AGAANLDVIQEVEYVKEEARIIYLLECL--QKTPPPVLVFCEHKADVDYIQEFLLLKGVE 139
L I + EE + ++ L L + ++FC V+ + + + G
Sbjct: 328 MDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYS 387
Query: 140 AVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIENYVH 199
IH + R F F+ LV TD+ ++G+DI + VIN+D P E Y+H
Sbjct: 388 CFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLH 447
>Os02g0641800 Similar to RNA helicase (Fragment)
Length = 483
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 22 LTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNVGR 81
L +DEAD+L+ F+ + ++ + A RQ L+FSAT P ++ F L KP ++N+
Sbjct: 255 LIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINL-- 312
Query: 82 AGAANLDVIQEVEYVKEEARIIYLLECL--QKTPPPVLVFCEHKADVDYIQEFLLLKGVE 139
L I + EE + ++ L L + ++FC V+ + + + G
Sbjct: 313 MDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYS 372
Query: 140 AVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIENYVH 199
IH + R F F+ LV TD+ ++G+DI + VIN+D P E Y+H
Sbjct: 373 CFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLH 432
>Os10g0503700 Similar to RNA helicase (Fragment)
Length = 521
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 22 LTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNVGR 81
L +DEAD+L+ F+ I ++ A RQ L+FSAT P +++F + L +P ++N+
Sbjct: 293 LVMDEADKLLAPEFQPSIEQLIHFLPANRQLLMFSATFPVTVKDFKEKYLPRPYVINL-- 350
Query: 82 AGAANLDVIQEVEYVKEEARIIYLLEC--LQKTPPPVLVFCEHKADVDYIQEFLLLKGVE 139
L I + EE + ++ L L+ ++FC V+ + + + G
Sbjct: 351 MDELTLKGITQYYAFVEERQKVHCLNTLFLKLQINQSIIFCNSVNRVELLAKKITELGYS 410
Query: 140 AVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIENYVH 199
IH + R F F+ LV TD+ ++G+ I + VIN+D P E Y+H
Sbjct: 411 CFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIGIQAVNVVINFDFPKTSETYLH 470
>Os09g0520700 Similar to RNA helicase
Length = 696
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 32/203 (15%)
Query: 14 NFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFK--AQRQTLLFSATMPEKIQNFAKSAL 71
NF + ++ LDEAD ++++GF DD+ + + + QTLLFSAT+PE
Sbjct: 264 NFRSL-KFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPE---------W 313
Query: 72 VKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYL-LECLQKTPPPVL------------- 117
VK + + ++G +D++ + E +K A + +L L C + V+
Sbjct: 314 VKKLSLRFLKSGKKTVDLVGD-EKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRT 372
Query: 118 -VFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKG 176
+F E K + + + A+HG +R+ F++ + VLVAT+VA++G
Sbjct: 373 IIFTETKESASDLSGLI----AGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARG 428
Query: 177 LDIPDIQHVINYDMPAEIENYVH 199
LDI D+Q +I + P ++E Y+H
Sbjct: 429 LDINDVQLIIQCEPPRDVEAYIH 451
>Os01g0184500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 625
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 5 FLDYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQR--------QTLLFS 56
LD++ N +YL LDEAD + D GF DIR+ K + QT+L +
Sbjct: 248 ILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVT 307
Query: 57 ATMPEKIQNFAKSALVKPIIVNVG----RAGAANLDVIQEVEYVKEEARIIYLLECLQKT 112
ATM + +Q + + R A D I+ E ++ LL+ L+ +
Sbjct: 308 ATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIK---LSGSENKLEALLQVLEPS 364
Query: 113 ---PPPVLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKD--VL 167
V+VFC + FL + V HG EER + F+ E D L
Sbjct: 365 LAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTL 424
Query: 168 VATDVASKGLDIPDIQHVINYDMPAEIENYVH 199
V TD+A++GLD+ D+ HVI +D P+ +Y+H
Sbjct: 425 VCTDLAARGLDL-DVDHVIMFDFPSNSIDYLH 455
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,841,845
Number of extensions: 380442
Number of successful extensions: 1943
Number of sequences better than 1.0e-10: 42
Number of HSP's gapped: 1894
Number of HSP's successfully gapped: 42
Length of query: 308
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 207
Effective length of database: 11,762,187
Effective search space: 2434772709
Effective search space used: 2434772709
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)