BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0184300 Os06g0184300|AK102933
(899 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 1738 0.0
Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 634 0.0
Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 236 8e-62
Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hyd... 228 2e-59
Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 226 6e-59
Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 216 4e-56
Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 208 2e-53
Os04g0647300 Similar to Ubiquitin-specific protease 22 149 7e-36
Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 147 5e-35
Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrola... 143 6e-34
Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrola... 141 2e-33
Os07g0661300 Similar to Ubiquitin-specific protease 24 98 2e-20
Os12g0489100 Similar to Ubiquitin-specific protease 12 89 1e-17
Os02g0693400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 82 2e-15
Os03g0192800 Similar to Ubiquitin-specific protease 26 82 3e-15
Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 80 5e-15
Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hyd... 80 6e-15
Os11g0619500 79 2e-14
Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 75 3e-13
Os11g0573000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 74 3e-13
Os12g0621000 Similar to Ubiquitin-specific protease 8 (Frag... 74 7e-13
Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrola... 72 2e-12
>Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 899
Score = 1738 bits (4501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/899 (93%), Positives = 842/899 (93%)
Query: 1 METLNPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGLDPELSVARIYLGRIGAG 60
METLNPD VGGGLDPELSVARIYLGRIGAG
Sbjct: 1 METLNPDAGDRAAAGAAQGVGVAAGGEGEARRAEKGEVVGGGLDPELSVARIYLGRIGAG 60
Query: 61 LQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTGK 120
LQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTGK
Sbjct: 61 LQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTGK 120
Query: 121 IVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKSLVH 180
IVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKSLVH
Sbjct: 121 IVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKSLVH 180
Query: 181 KIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEKQYQ 240
KIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEKQYQ
Sbjct: 181 KIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEKQYQ 240
Query: 241 CQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISDSKG 300
CQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISDSKG
Sbjct: 241 CQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISDSKG 300
Query: 301 ADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360
ADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY
Sbjct: 301 ADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360
Query: 361 VRDRVGNPTPRKDNITANMPARRTIPEKISGLSDMIQSGVIEAKLNGSSSPYGDKRLHGI 420
VRDRVGNPTPRKDNITANMPARRTIPEKISGLSDMIQSGVIEAKLNGSSSPYGDKRLHGI
Sbjct: 361 VRDRVGNPTPRKDNITANMPARRTIPEKISGLSDMIQSGVIEAKLNGSSSPYGDKRLHGI 420
Query: 421 SNGNSIKTSREHYLKKDGKTEAPKASENNGLASTQKASAPQIDGATLSAQSKQITSTGHR 480
SNGNSIKTSREHYLKKDGKTEAPKASENNGLASTQKASAPQIDGATLSAQSKQITSTGHR
Sbjct: 421 SNGNSIKTSREHYLKKDGKTEAPKASENNGLASTQKASAPQIDGATLSAQSKQITSTGHR 480
Query: 481 EVSSSDRSASLTHVIVNQAVAMVPSQELQPKVDGLTDTSSLGNGNAILSERNKQTSQHQN 540
EVSSSDRSASLTHVIVNQAVAMVPSQELQPKVDGLTDTSSLGNGNAILSERNKQTSQHQN
Sbjct: 481 EVSSSDRSASLTHVIVNQAVAMVPSQELQPKVDGLTDTSSLGNGNAILSERNKQTSQHQN 540
Query: 541 PFSMPASHGKDTGAGLAAQTFPTKDAIVSNGVVPSSRDPISSEKVCGLQKSIKQDDKTVK 600
PFSMPASHGKDTGAGLAAQTFPTKDAIVSNGVVPSSRDPISSEKVCGLQKSIKQDDKTVK
Sbjct: 541 PFSMPASHGKDTGAGLAAQTFPTKDAIVSNGVVPSSRDPISSEKVCGLQKSIKQDDKTVK 600
Query: 601 ELPISENNIVSGLERVNARKQTSSEVSMKVAAADSCNSNTPKRVDLKSKKLVRYPVMNMW 660
ELPISENNIVSGLERVNARKQTSSEVSMKVAAADSCNSNTPKRVDLKSKKLVRYPVMNMW
Sbjct: 601 ELPISENNIVSGLERVNARKQTSSEVSMKVAAADSCNSNTPKRVDLKSKKLVRYPVMNMW 660
Query: 661 LGPRQVMLGSLKVQKKKKCNRTRRRSVVCEDMANATCSGNNXXXXXXXXXXXXXXXXVQC 720
LGPRQVMLGSLKVQKKKKCNRTRRRSVVCEDMANATCSGNN VQC
Sbjct: 661 LGPRQVMLGSLKVQKKKKCNRTRRRSVVCEDMANATCSGNNTSEQQASTSTTTSSETVQC 720
Query: 721 TPRGRKRAYDSDSPXXXXXXXXXXDVIGADTGSGELNMDKRNVISETAASAELPKLGPGS 780
TPRGRKRAYDSDSP DVIGADTGSGELNMDKRNVISETAASAELPKLGPGS
Sbjct: 721 TPRGRKRAYDSDSPKNNNQKQNKQDVIGADTGSGELNMDKRNVISETAASAELPKLGPGS 780
Query: 781 SANQEHSRNNVHAKLGVPRHFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYV 840
SANQEHSRNNVHAKLGVPRHFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYV
Sbjct: 781 SANQEHSRNNVHAKLGVPRHFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYV 840
Query: 841 LDEWDEEYDRGKTKKIRNSKEDYGGPNPFQEEANYISQRNMKQRTYQPKSWKKHAHVRR 899
LDEWDEEYDRGKTKKIRNSKEDYGGPNPFQEEANYISQRNMKQRTYQPKSWKKHAHVRR
Sbjct: 841 LDEWDEEYDRGKTKKIRNSKEDYGGPNPFQEEANYISQRNMKQRTYQPKSWKKHAHVRR 899
>Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1185
Score = 634 bits (1634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/555 (59%), Positives = 389/555 (70%), Gaps = 47/555 (8%)
Query: 40 GGGLDPELSVARIYLGRIGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTA 99
GGG+DPEL VAR+YL RIGAGLQN GNTCYLNSVLQCLTYTEPF AYLQSG+H SSCRT
Sbjct: 67 GGGIDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTI 126
Query: 100 GFCALCALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHK 159
GFCALCALQ HV +ALQSTGKI+ P IV+NLRCISRSFR SRQEDAHELMV+LLESMHK
Sbjct: 127 GFCALCALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHK 186
Query: 160 CCLPSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSL 219
CCLPSGVPS SPSAYEKSLVH+IFGG LRSQV+CT CSHCSNKFDPFLDLSL+I A +L
Sbjct: 187 CCLPSGVPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATL 246
Query: 220 VRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKI 279
V+ALQ+FTAEELLDGGEKQY C+ CR+KVVAKK+F I+KAP VLTIHLKRFSPFNPR KI
Sbjct: 247 VKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKI 306
Query: 280 DKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDD 339
DKKV FQP L+LKP++S+ +G +FKYSLYGVLVHAGWNTQSGHYYCFVRTSSG+WHNLDD
Sbjct: 307 DKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDD 366
Query: 340 NQVRQVREADVLRQKAYMLFYVRDRVGNPTPRKDNITANMPARRTIPEKISGLSDMIQSG 399
N+V QVREADVLRQKAYMLFYVRDR + DN T N+ + I EKI+ ++ I+
Sbjct: 367 NKVYQVREADVLRQKAYMLFYVRDRTRSSVMYSDNCTVNLSVNKMISEKITCMNGSIKKD 426
Query: 400 VIEAKL-------------------NGSSSPYGDKRLHGISNGNSIKTSREHYLKKDGKT 440
+E K NG SS ISN + S+ H + +
Sbjct: 427 TVETKTLRVPSLVKEDVNLKKQNSENGQSS--------NISNAPQDQCSKSH---SNTEV 475
Query: 441 EAPKASENNGLASTQKASA--PQIDGATLSAQSKQITSTGHREVSSSDRS--ASLTHVIV 496
AS NN ASTQKAS P L +++Q RE++S ++ + L +
Sbjct: 476 LEAAASPNNDPASTQKASCIRPDTAAVNLPMKTEQTAPDNRREITSPAQADVSVLHNASF 535
Query: 497 NQAVAMVPSQELQPKV-DGLTDT--------SSLGNGNAILSERNKQTSQHQ---NPFSM 544
NQ + QE Q + D LTD+ + G G+ +L RN Q+S+ P ++
Sbjct: 536 NQKLYEKQLQEHQLETDDALTDSRKDAPAALCTYGVGDGLLG-RNGQSSEPHIGPCPAAL 594
Query: 545 PASHGKDTGAGLAAQ 559
P +G + G Q
Sbjct: 595 PIHNGGEGLLGANGQ 609
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 198/421 (47%), Gaps = 61/421 (14%)
Query: 523 NGNAILSERNKQTSQHQNPFSMPASHGKDTGAGLAAQTFPTKDAIVSNGVVPSSRDPI-- 580
NG ++ E+ Q S +PF P DT + AQ PT+ A VSNG V SS D
Sbjct: 766 NGTGVILEKYGQVSGPADPFCKPTPTISDTVS--IAQIIPTEHAAVSNGTVSSSDDLTGN 823
Query: 581 -----SSEKV--CGLQKSIKQ------------DDKTV---------KELPISENNIVSG 612
SSE V G Q ++ D++T K++ +N+ +
Sbjct: 824 TEANESSEFVKNYGEQVMVRDLSAETSGDRANADEQTSMQNNTLEVGKDVAKDTDNVANA 883
Query: 613 ---------LERVNARKQT---------SSEVSMKVAAADSCNSNTPKRVDLKSKKLVRY 654
E+V + KQ SE + ++ D+ + K+++ KSK+ V+Y
Sbjct: 884 EEQVLNHPLAEQVKSEKQIYPGISTTLICSEDTTQLIDKDTGSGKLNKKMNCKSKRQVKY 943
Query: 655 PVMNMWLGPRQVMLGSLKVQKKKKCNRTRRRSVVCEDMANATCSGNNXXXXXXXXXXXXX 714
P + M+ GP+Q++L S+K+ KK+K R+++ + + +
Sbjct: 944 PAVRMFFGPKQLLLASVKLHKKRKHKRSKKHHALSVHIESII------TDQQTSTSETVF 997
Query: 715 XXXVQCTPRGRKRAYDSDSPXXXXXXXXXXDVIGADTGSGELNMDKRNVISETA-----A 769
+ RG+KR+ S S I T S ++ + + S + A
Sbjct: 998 SKIISHKSRGQKRSCASASSEDGTQLFNKKQHIEGTTNSVPMDNNDTKLASADSNDAKLA 1057
Query: 770 SAELPKLGPGSSANQEHSRNNVHAKLGVPRHFTVLTRDLAEVTVPCWDDVAVSNAEARES 829
SAELP S NQ SRNNV+A P HF +LTR L E+TVP WDD + N + E
Sbjct: 1058 SAELPSSCTNSLVNQTDSRNNVNANERGPWHFNLLTRGLREITVPRWDDTEIKNTKETEI 1117
Query: 830 KHSESKSIGYVLDEWDEEYDRGKTKKIRNSKEDYGGPNPFQEEANYISQRNMKQRTYQPK 889
H ++SIGYVLDEWDEEYDRGK KKIR K + GPNPFQE AN S++ M+ ++ Q K
Sbjct: 1118 LHPRTRSIGYVLDEWDEEYDRGKRKKIRKPKHGFSGPNPFQETANIRSRQRMRLQSDQTK 1177
Query: 890 S 890
S
Sbjct: 1178 S 1178
>Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 944
Score = 236 bits (601), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 184/324 (56%), Gaps = 12/324 (3%)
Query: 54 LGRIGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSC--RTAGFCALCALQNHV 111
L + GL N GN+C+ N VLQCL+ T P AAYL H C R +C LC LQ H+
Sbjct: 74 LDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHI 133
Query: 112 KTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLP--SGVPSE 169
+ A +S P I+ +L I + RQEDAHE M ++ M CL G +
Sbjct: 134 QRASESMHPFA-PKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAV 192
Query: 170 SPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI-GKATSLVRALQNFTA 228
PS E +L+ IFGGRL+SQV+CT C SN+++ +DL+++I G A SL L FTA
Sbjct: 193 DPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTA 252
Query: 229 EELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPM 288
E LD G+ +Y+C C V A+K+ T+ +AP +LTI LKRF K++K+V F
Sbjct: 253 VEWLD-GDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQS-GRFGKLNKRVTFPMK 310
Query: 289 LDLKPFISDSKGADFKYSLYGVLVHAGWNTQS--GHYYCFVRTSSGMWHNLDDNQVRQVR 346
LDL P++S + G+D +Y LY V+VH S GHY C+++ G W+ +DD +V V
Sbjct: 311 LDLTPYMSSTDGSD-QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVD 369
Query: 347 EADVLRQKAYMLFYVRDRVGNPTP 370
E +V Q AYML Y R R P P
Sbjct: 370 EEEVHAQGAYMLLYSR-RTARPRP 392
>Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 978
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 192/330 (58%), Gaps = 12/330 (3%)
Query: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTG 119
GL NLGN+CY N+VLQCL +T P +YL G H +C +C +C + V Q G
Sbjct: 451 GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQ--G 508
Query: 120 KI-VTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEK-S 177
KI ++P+ I+ +L I SF +QEDAHE + +++M C+ S + +E+ +
Sbjct: 509 KIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETT 568
Query: 178 LVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI-GKATSLVRALQNFTAEELLDGGE 236
L+ IFGG LRS+++CT+C S + + LDL+++I G +SL AL+ FT+ E+LDG
Sbjct: 569 LMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLDGDN 628
Query: 237 KQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFIS 296
K Y+C RC+ AKKK TI +AP VLTI LKR+ KI+K + F L+L+ ++S
Sbjct: 629 K-YKCSRCKSHERAKKKLTISEAPNVLTIALKRYQS-GKFGKINKAIRFPETLNLQRYMS 686
Query: 297 DSKGADFK--YSLYGVLVHAGWNTQ--SGHYYCFVRTSSGMWHNLDDNQVRQVREADVLR 352
K D YSLY V+VH SGHY C+V+ + G W+ DD+QV+ V +V+
Sbjct: 687 -PKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMS 745
Query: 353 QKAYMLFYVRDRVGNPTPRKDNITANMPAR 382
+ AYML Y R P+ + + A PAR
Sbjct: 746 KCAYMLLYARCSPRAPSSVRPALMAQDPAR 775
>Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 975
Score = 226 bits (576), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 180/309 (58%), Gaps = 10/309 (3%)
Query: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTG 119
GL N GN+CY N+VLQCL T+P YL H C + +C +C L+ + T L+ +G
Sbjct: 442 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAST-LRESG 500
Query: 120 KIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSE---SPSAYEK 176
V+PS+I+ NLR I QEDAHE + +L+ SM CL G+ E S E
Sbjct: 501 GPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL-DGLGGEKQVEASLQET 559
Query: 177 SLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI-GKATSLVRALQNFTAEELLDGG 235
+L+ ++FGGRL+S+VKC +C H S +++ +DL+L+I G SL AL FTA E LD G
Sbjct: 560 TLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLD-G 618
Query: 236 EKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFI 295
E Y+C RC V A+K+ ++ + P +LT+ LKRF KI+K V F MLD+ PF+
Sbjct: 619 ENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQT-GKYGKINKCVTFPDMLDMVPFV 677
Query: 296 SDSKGADFKYSLYGVLVHAGWNTQ--SGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ 353
+ + Y LY V+VH SGHY +V+ G W +DD++V+ V V+ +
Sbjct: 678 TGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSE 737
Query: 354 KAYMLFYVR 362
AYMLFY+R
Sbjct: 738 GAYMLFYMR 746
>Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 918
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 177/326 (54%), Gaps = 32/326 (9%)
Query: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTA-------------GFCALCA 106
GL NLGN+CY N+VLQCL +T P AYL G H +C +C +C
Sbjct: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCE 442
Query: 107 LQNHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPS-- 164
+ + + + +P+ I+ +LR I SF R+EDAHE + +++M +
Sbjct: 443 FEKLILEGRRGKSHL-SPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAK 501
Query: 165 -----GVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI-GKATS 218
G+P E+ +LV IFGG LRS++KCT C S + + LDL+++I G +
Sbjct: 502 KNGVYGLPEET------TLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINT 555
Query: 219 LVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREK 278
L AL FT+ E+LDG + +Y C RC+ AKKK TI +AP +LTI LKR+ N K
Sbjct: 556 LEEALHRFTSTEILDG-DNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGN-FGK 613
Query: 279 IDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQ--SGHYYCFVRTSSGMWHN 336
I+K V F L+L ++S + Y LY V+VH SGHY C+V+ + G WH
Sbjct: 614 INKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHK 673
Query: 337 LDDNQVRQVREADVLRQKAYMLFYVR 362
+DD+QV+ V VL + AYMLFY R
Sbjct: 674 MDDSQVKPVSLEKVLSKCAYMLFYAR 699
>Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 644
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 177/320 (55%), Gaps = 21/320 (6%)
Query: 61 LQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTA-----GFCALCALQNHVKTAL 115
L+NLGNTCYLNSVLQCL T P A + S +H + C+ C C ++ + L
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPNKDKECVFCVVERQISRLL 84
Query: 116 QS-TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL------PSGVPS 168
++ G + +P++I++ L + FR RQEDAHE + ++++ H L P+ +
Sbjct: 85 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 144
Query: 169 ESPSAYE------KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRA 222
E ++ + FGG L SQVKC C SNK D +D+SLD+ + S+ A
Sbjct: 145 GDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADA 204
Query: 223 LQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKK 282
L F E+L+G K Y C+RC+K A+K+ + +AP VL I LKRF N KI++
Sbjct: 205 LARFFQPEILEGSNK-YSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGIN-GGKINRN 262
Query: 283 VDFQPMLDLKPFISDSKGADFK-YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQ 341
++F+ L L F+ + Y+L+G +VH+G++ SGHYY +V+ + G W+ +D+
Sbjct: 263 IEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSH 322
Query: 342 VRQVREADVLRQKAYMLFYV 361
+ DVL +K Y+LFY+
Sbjct: 323 ISPSSSQDVLSEKVYILFYI 342
>Os04g0647300 Similar to Ubiquitin-specific protease 22
Length = 591
Score = 149 bits (377), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 173/368 (47%), Gaps = 69/368 (18%)
Query: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKH-KSSC--------RTA-----GFCALC 105
GL NLGNTC++NSVLQ L + P Y +H + C R+A C C
Sbjct: 212 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 271
Query: 106 ALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSG 165
L A +P++ + + + + + Q+DAHE +++L+ +H+
Sbjct: 272 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQ 331
Query: 166 VPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIG----------- 214
S + + + H++F G LRS V CT C S F+P +D+SLD+
Sbjct: 332 HKSLAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVAN 391
Query: 215 -----------------KATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTID 257
K ++L+R L+ FT E LD E+++ C+RC+++ + K+ +I
Sbjct: 392 PKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLD-AEQKFFCERCKERQESLKQMSIR 450
Query: 258 KAPYVLTIHLKRFSPFNPRE---KIDKKVDFQPMLDLKPFISDS---------------- 298
+ P V H+KRF + ++ K+D + F LD+ P++S S
Sbjct: 451 RLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEAS 510
Query: 299 ---KGADF--KYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ 353
++F ++ ++ V++H+G ++GHY ++R ++ W+ DD V +V E V
Sbjct: 511 DADSVSEFSSEFEIFAVIMHSG-KLEAGHYVTYLRLNNH-WYKCDDAWVTRVEEHTVRTS 568
Query: 354 KAYMLFYV 361
+AYMLFYV
Sbjct: 569 QAYMLFYV 576
>Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 415
Score = 147 bits (370), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 168/346 (48%), Gaps = 51/346 (14%)
Query: 60 GLQNLGNTCYLNSVLQ----CLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTAL 115
GL+N GNTCY NSVLQ C+ + E Y + K+ L L + + A
Sbjct: 73 GLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKNTEDSEDNLLTCLADLFSQITLAK 132
Query: 116 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHEL-------MVNLLESMHKCCLPSGVPS 168
+ TG ++ P + V+ +R + FR+ +DAHE ++++LE C + P
Sbjct: 133 KRTG-VLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFLVNDIIDILEE--DCRTANSSPE 189
Query: 169 ESPSAYEK----------------SLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLD 212
+P +LVH+ F G L ++ KC C + K + F DLS+D
Sbjct: 190 TTPEEVSNGAANALANGARERPLVTLVHRTFQGILTNETKCLMCDTITAKDETFFDLSID 249
Query: 213 IGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSP 272
+ + +SL L++F + E+L+ GE ++ C +C A K+ I KAP+VL IHLKRF
Sbjct: 250 VEQNSSLTSCLKSFFSTEILN-GEDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFKY 308
Query: 273 FNPREKIDKKVDFQPM--LDLKPFISDSKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTS 330
+ KK+ ++ + L+LK S S+ AD +YSL+ V+VH G + GHY ++ S
Sbjct: 309 VEQLSR-HKKLSYRVVYPLELK-LGSMSEDADCEYSLFAVVVHVGSSPNHGHYVSQIK-S 365
Query: 331 SGMWHNLDDNQVRQVREADVLR--------------QKAYMLFYVR 362
G W + DD+ V Q+ E L+ Y+LFY R
Sbjct: 366 HGNWLSFDDDTV-QISEESTLQTFYGSSREHCGGNTDHGYILFYER 410
>Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 4) (AtUBP4)
Length = 367
Score = 143 bits (361), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 153/321 (47%), Gaps = 38/321 (11%)
Query: 60 GLQNLGNTCYLNSVLQCLTYTEPF----AAYLQSGKHKSSCRTAGFCALCALQNHVKTAL 115
GL+N GNTCY NSVLQ L + PF Y + K L L V +
Sbjct: 26 GLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKTPGDAEENLLTCLADLFMQVSQSK 85
Query: 116 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELM-------VNLLESMHKCC------- 161
+ TG ++ P + V+ ++ + FR+ +DAHE + V++LE
Sbjct: 86 KKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESNAAKDSPQSS 144
Query: 162 ------------LPSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDL 209
L +GV E P +LVHK F G L ++ +C +C + + + F DL
Sbjct: 145 SPEKVPNGPVQPLANGVRKEPPV----TLVHKNFQGILTNETRCLRCETVTARDETFFDL 200
Query: 210 SLDIGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKR 269
S+DI + +S+ L+NF + E L+ E ++ C +C A+K+ I KAP++L IHLKR
Sbjct: 201 SVDIEQNSSITSCLKNFCSTETLN-AEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKR 259
Query: 270 FSPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQSGHYYCFVRT 329
F + KK+ ++ + ++ +S S D +YSL+ V+VH G GHY V+
Sbjct: 260 FKYIEQLGRY-KKLSYRVVFPMELKLSTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVK- 317
Query: 330 SSGMWHNLDDNQVRQVREADV 350
S W DD V V E+ +
Sbjct: 318 SHNHWLFFDDENVEMVEESTL 338
>Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 3) (AtUBP3)
Length = 366
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 152/321 (47%), Gaps = 37/321 (11%)
Query: 60 GLQNLGNTCYLNSVLQCLTYTEPF----AAYLQSGKHKSSCRTAGFCALCALQNHVKTAL 115
GL+N GNTCY NSVLQ L + PF Y + K L L + +
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNMLTCLADLFSQISNQK 83
Query: 116 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELM-------VNLLESMHKCCLPSGVPS 168
+ TG ++ P + ++ L+ + FR+ +DAHE + V++LE K P
Sbjct: 84 KKTG-VIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILEKESKVV---AEPC 139
Query: 169 ESPSAYEKS------------------LVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLS 210
E+ S + S LVHK F G L ++ +C +C +++ + F DLS
Sbjct: 140 ENSSLKKNSNGPINVQLNGTKKEPVPTLVHKCFQGILTNETRCLRCETVTDRDETFFDLS 199
Query: 211 LDIGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF 270
LDI + +S+ L+NF++ E L+ E ++ C +C A+K+ I K P +L IHLKRF
Sbjct: 200 LDIEQNSSITSCLKNFSSTETLN-AEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRF 258
Query: 271 SPFNPREKIDKKVDFQPMLDLK-PFISDSKGADFKYSLYGVLVHAGWNTQSGHYYCFVRT 329
+ KK+ ++ + L+ I+ +D +YSL+ VLVH G GHY V+
Sbjct: 259 KYIEQLGRY-KKLSYRVVFPLELKLINTVDNSDLEYSLFAVLVHVGSGPNHGHYISLVK- 316
Query: 330 SSGMWHNLDDNQVRQVREADV 350
S W DD V E+ V
Sbjct: 317 SHNHWLFFDDENVEMTDESMV 337
>Os07g0661300 Similar to Ubiquitin-specific protease 24
Length = 489
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 152/358 (42%), Gaps = 65/358 (18%)
Query: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCAL-----------Q 108
GL+N GN C+LNS LQ L PF LQ+ ++++ + AG+ L A
Sbjct: 137 GLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQNIPK-AGYPTLNAFIEFISQFDVLDD 195
Query: 109 NHVKTALQSTGKIVTPSQIVKNLRCISRSF---------RNSRQEDAHELMVNLLESMHK 159
++VK + I + S I + R+F RQEDA E + ++ MH
Sbjct: 196 SNVKKD-EKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHD 254
Query: 160 CCLPSG-----------VPSESPSAYE------KSLVHK-----------IFGGRLRSQV 191
+ V S A+E KS + + IFGG+L+S V
Sbjct: 255 ELVKLNGNGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCV 314
Query: 192 KCTQCSHCSNKFDPFLDLSLDI--GKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVV 249
K T + S PF + LDI L AL+ F A E L+G Y+ + +V
Sbjct: 315 KAT-GNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESLEG----YRTAAGKAGLV 369
Query: 250 -AKKKFTIDKAPYVLTIHLKRFSPFNPR--EKIDKKVDFQPMLDLKPFISDSKGADF--- 303
A+K I ++ +HLKRFS + K+ K + F L L + S ++
Sbjct: 370 TARKSVKIHSLSKIMILHLKRFS-YGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQS 428
Query: 304 -KYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360
+Y L + H G N GHY +++SG W DD+ V V VL +AY+LFY
Sbjct: 429 RRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVLFY 486
>Os12g0489100 Similar to Ubiquitin-specific protease 12
Length = 551
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 34/298 (11%)
Query: 59 AGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQST 118
GL+N G TCY+NS+LQ L + F + + +G L ALQ+ + LQ +
Sbjct: 207 VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPL-ALQS-LFYKLQYS 264
Query: 119 GKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKSL 178
V ++ K+ ++ + Q D EL L E + + V +
Sbjct: 265 DNSVATKELTKSFGW--DTYDSFMQHDVQELNRVLCEKLEDKMKETVV---------EGT 313
Query: 179 VHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEK- 237
+ ++F G + ++C + SN+ + F DL LD+ + + + + E L+G K
Sbjct: 314 IEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCSDVYASFDKYVEVERLEGDNKY 373
Query: 238 ---QYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPRE---KIDKKVDFQPMLDL 291
QY Q +K V+ +D P VL + LKRF R+ KI+ + +F LDL
Sbjct: 374 HAEQYGLQDAKKGVLF-----LDFPP-VLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDL 427
Query: 292 K----PFISDSKGADFK--YSLYGVLVHAGWNTQSGHYYCFVR-TSSGMWHNLDDNQV 342
+++ + Y+L+ VLVH+G GHYY F+R T S W+ DD +V
Sbjct: 428 DRDDGKYLAPDADRSIRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQWYKFDDERV 484
>Os02g0693400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 257
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Query: 57 IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCR--TAGFCALCALQNHVKTA 114
+G+GL N+GNTC+LNS+LQC+T+T P L+S H + C GFC+ CAL+ H+ +
Sbjct: 169 VGSGLGNMGNTCFLNSILQCVTHTVPLFLRLRSTDHCAPCSYDKDGFCSFCALKEHIDES 228
Query: 115 LQSTGKIVTPSQIVKNLRCI--SRSF 138
++ +G ++ P + NLR I SR F
Sbjct: 229 IRRSGSVIRPVRFRDNLRSILCSRFF 254
>Os03g0192800 Similar to Ubiquitin-specific protease 26
Length = 311
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 59 AGLQNLGNTCYLNSVLQCLTYTEPF---AAYLQSGKHKSSCRTAGFCALCALQNHVKTAL 115
AGL NLG TCY NS+LQCL F L+ K L A + K A
Sbjct: 106 AGLTNLGATCYANSILQCLYMNTSFRLGIFSLEPDILKMHPVLDQLARLFAQLHSSKMAF 165
Query: 116 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYE 175
+ + +K L N Q+D+HE + L L G S S
Sbjct: 166 ------IDSAPFIKTLE-----LDNGVQQDSHEFLTLFLS------LLEGSLSHSKVPGA 208
Query: 176 KSLVHKIFGGRLRSQVKCTQC---SHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELL 232
+++V +F G + +C+ C S S+K + F +L L+I +L ++L ++ + E L
Sbjct: 209 RTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLNNLEQSLDDYLSTEAL 268
Query: 233 DGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF 270
DG E QY C+ C+K+V A + + P V+ LKR+
Sbjct: 269 DG-ENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRY 305
>Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 500
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 16/189 (8%)
Query: 182 IFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEKQ--- 238
+FGG+ R C++C SN + F L +I +V A T E+ LD ++
Sbjct: 1 MFGGKFRRSKVCSKCGMLSNSEEDFTLLMFNIPHREQVVAA----TLEDCLDHIVEENVH 56
Query: 239 ---YQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNP--REKIDKKVDFQPMLDLKP 293
+C+ C + K T + V+ + L+RF P KI + ++F LD+ P
Sbjct: 57 DSLSRCESCMNDQKSTSKCTFHETRDVVIV-LQRFEPLTLGGYRKIGELINFPTELDISP 115
Query: 294 FISDSKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ 353
++S Y L+G++VH G GHY +V+T+ W+ + D V++V E VL
Sbjct: 116 YMSGVVTDKHIYELFGIIVHEG-GVIGGHYRSYVKTNC--WYEVSDRDVKRVNENFVLGA 172
Query: 354 KAYMLFYVR 362
+AY+LFY R
Sbjct: 173 QAYILFYNR 181
>Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1055
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 39 VGGGLDPELSVARIYLGRIGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRT 98
V G D +L + + G + GL NLGNTC+ N+V+Q L + L+S T
Sbjct: 206 VAGAADRDLGLVNSH-GSVIRGLPNLGNTCFFNAVMQSLLALD----RLRSKMLGPDVPT 260
Query: 99 AGFCALCALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMH 158
+A G ++P + N+ FR + +D+HEL+ L+ +H
Sbjct: 261 GALLMSLKKLFMETSASNDVGGALSPKNLFSNICSKYPQFRGFQMQDSHELLRCFLDGLH 320
Query: 159 -KCCLPSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI 213
+ + E+ SA ++V IFGG+L S V T+C+H S K D FLDLSL +
Sbjct: 321 TEENEARKLADEASSATIPTIVDSIFGGQLSSTVSSTECTHSSVKHDQFLDLSLPV 376
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 20/151 (13%)
Query: 234 GGEKQYQCQRCRKKVV--AKKKFTIDKAPYVLTIHLKRFS--PFNPREKIDKKVDFQPML 289
G + Q + + KKV A ++ I KAP VLTI+L RFS +K+ V F+ L
Sbjct: 908 GQDNQNEQKENGKKVFRSAMRRILISKAPPVLTINLNRFSQDSHGRFKKLKGHVHFKETL 967
Query: 290 DLKPFIS--DSKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTS-----------SGMWHN 336
D++PF+ + + Y L GV+ H G +GHY +VRT S W
Sbjct: 968 DVRPFMDPRSKENDNTTYRLVGVVEHLG-TMAAGHYVAYVRTGKIGGRQQRSTGSKSWFY 1026
Query: 337 LDDNQVRQVREADVLRQKAYMLFYVRDRVGN 367
D QVR+ +VL +AY+LFY +RVG+
Sbjct: 1027 ASDAQVREASLEEVLNCEAYILFY--ERVGD 1055
>Os11g0619500
Length = 1402
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 16/129 (12%)
Query: 249 VAKKKFTIDKAPYVLTIHLKRFSPFNP--REKIDKKVDFQPMLDLKPFISDSKGAD--FK 304
VA K+ I+KAP VLTI LKRF + KI++ V FQ LD+ ++ D++ D +K
Sbjct: 1252 VATIKYRINKAPPVLTIQLKRFEFVHDDGSGKIEEHVIFQETLDITKYM-DTRYLDNEYK 1310
Query: 305 YSLYGVLVHAGWNTQSGHYYCFVRTS-----------SGMWHNLDDNQVRQVREADVLRQ 353
Y L V+VH G GHY+ +VR S + W +D +V +V +VL+
Sbjct: 1311 YCLVAVIVHGGQKLDGGHYFAYVRASRTGGQKRESSDTHSWFLANDEKVEEVLFENVLKC 1370
Query: 354 KAYMLFYVR 362
+AY+LFY R
Sbjct: 1371 EAYILFYER 1379
>Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 911
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRT-----AGFCALCALQNHVKTA 114
GL+NLGNTC++NS +QCL +T Y + RT G AL A ++
Sbjct: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELAL-AFGELLRRL 321
Query: 115 LQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKC-----CLP------ 163
+ K V+P + C + F Q D+ EL+ LL+ +H+ C P
Sbjct: 322 WNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKD 381
Query: 164 -SGVPSESPS--------AYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI 213
SG P + + A S++ + G+ +S + C CS S FDPF+ LSL +
Sbjct: 382 ASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPV 440
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 216 ATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFN- 274
+ +L L+ F EE L G E + C C+K A KK + + P VL IHLKRFS
Sbjct: 736 SVALHGCLEAFLKEEPL-GPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQF 794
Query: 275 PREKIDKKVDFQPM--LDLKPFISD-SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSS 331
R K++ VDF P+ LDL +I D S+ +D Y LY + H G N GHY +
Sbjct: 795 TRNKLETFVDF-PISDLDLSSYIIDKSELSDCHYRLYAISNHYG-NMGGGHYTASIYHEE 852
Query: 332 GM-WHNLDDNQVRQVREADVLRQKAY 356
G W+ DD VR + E + AY
Sbjct: 853 GKGWYKFDDECVRPITEDSIKTPAAY 878
>Os11g0573000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 290
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 31/282 (10%)
Query: 59 AGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQST 118
GL+N G TCY+NS+LQ L + F + + +G L ALQ+ + LQ +
Sbjct: 22 VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPL-ALQS-LFYKLQYS 79
Query: 119 GKIVTPSQIVKNLRCISRSFRNSRQEDAHEL---MVNLLESMHKCCLPSGVPSESPSAYE 175
V ++ K+ ++ + Q D EL + LE K + G
Sbjct: 80 DNSVATKELTKSFGW--DTYDSFMQHDVQELNRVLCEKLEDKMKRTVVEGT--------- 128
Query: 176 KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGG 235
+ K+F G + ++C + SN+ + F DL LD+ + + + E L+G
Sbjct: 129 ---IEKLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD 185
Query: 236 EKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPRE---KIDKKVDFQPMLDL- 291
K Y + + K +D P VL + LKRF R+ KI+ + +F LDL
Sbjct: 186 NK-YHAENHGLQDAKKGVLFLDFPP-VLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLD 243
Query: 292 ----KPFISDS-KGADFKYSLYGVLVHAGWNTQSGHYYCFVR 328
K D+ + Y+L+ VLVH+G GHYY F+R
Sbjct: 244 RDDGKYLAPDADRSIRNLYALHSVLVHSG-GVHGGHYYAFIR 284
>Os12g0621000 Similar to Ubiquitin-specific protease 8 (Fragment)
Length = 864
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 218 SLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFS-PFNPR 276
SL L+ F EE L G E + C C++ A KK + + P +L IHLKRFS +
Sbjct: 696 SLYACLEAFIKEEPL-GPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTK 754
Query: 277 EKIDKKVDFQPM--LDLKPFISDSKGADFK--YSLYGVLVHAGWNTQSGHYYCFV-RTSS 331
K++ VDF P+ LDL +I S+G Y LY + H G + GHY +V
Sbjct: 755 NKLETCVDF-PVHDLDLSKYIG-SRGQQISNHYRLYAISNHYG-SMGGGHYTAYVYHEGK 811
Query: 332 GMWHNLDDNQVRQVREADVLRQKAYMLFYVR 362
W++ DD V + E + AY+LFY R
Sbjct: 812 KGWYDFDDRHVGPISEESIKTSAAYVLFYRR 842
>Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)
(Ubiquitin thiolesterase 12) (Ubiquitin-specific
processing protease 12) (Deubiquitinating enzyme 12)
Length = 931
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 215 KATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFN 274
+A +L L F +E L G + + C RC + A KK + + P +L +HLKRFS
Sbjct: 758 EAVNLFSCLDAFLKDEPL-GPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSR 816
Query: 275 -PREKIDKKVDFQPM--LDLKPFISDSKGADFK-YSLYGVLVHAGWNTQSGHYYCFVR-T 329
+ K+D V+F P+ LD+ + + S+G Y LY V+ H G GHY + +
Sbjct: 817 FMKNKLDTFVNF-PIHDLDMSRYANHSRGDQPPIYELYAVINHYG-GMGGGHYSAYAKLV 874
Query: 330 SSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 362
W++ DD+ V V E D+ AY+LFY R
Sbjct: 875 EEDSWYHFDDSHVSSVGEEDIRTSSAYLLFYRR 907
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.129 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 28,516,847
Number of extensions: 1186427
Number of successful extensions: 2673
Number of sequences better than 1.0e-10: 22
Number of HSP's gapped: 2630
Number of HSP's successfully gapped: 25
Length of query: 899
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 789
Effective length of database: 11,292,261
Effective search space: 8909593929
Effective search space used: 8909593929
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 161 (66.6 bits)