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Os02g0244300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0133) R2 : 2.05e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00271 (0.028) R2dN8 : 2.65e-05 R2N8 : 2.05e-05
σ : 0.25
deviance : 28.8
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C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.14 0.183 10.2 0.437 0.35 0.277 -0.0181 -0.157 0.00721 9.7 41.19 1252 -- --
15.17 0.181 10.2 0.432 0.351 0.28 0.00816 -- 0.0104 9.71 41.77 1251 -- --
15.12 0.181 10.2 0.426 0.353 0.283 -- -0.141 0.00205 9.64 42.77 1250 -- --
15.08 0.181 10.2 0.473 0.339 0.3 -- -- 0.0147 9.78 45.49 1277 -- --
21.33 0.215 10.2 0.461 -- 0.235 -- -0.106 0.0146 -- 43.02 1490 -- --
17.29 0.195 10.2 0.471 0.312 -- -0.0158 -- 0.0483 9.43 -- -- -- --
17.29 0.195 10.2 0.471 0.312 -- -- -- 0.0482 9.42 -- -- -- --
21.23 0.215 10.2 0.465 -- 0.275 -- -- 0.0371 -- 46.29 1491 -- --
20.5 0.211 10.2 -- 0.338 0.289 -- -- -0.0415 9.65 40 1270 -- --
23 0.224 10.2 0.469 -- -- -- -- 0.0493 -- -- -- -- --
23.12 0.225 10.2 -- 0.312 -- -- -- -0.00417 9.31 -- -- -- --
26.85 0.241 10.3 -- -- 0.25 -- -- -0.0494 -- 40 1455 -- --
28.8 0.25 10.2 -- -- -- -- -- -0.00271 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.02 humidity 50.0 1440 < th dose independent rect. 16 1
2 15.03 humidity 50.0 1440 < th dose dependent rect. 16 1
3 15.12 humidity 50.0 1440 > th dose independent rect. 16 1
4 15.14 temperature 30.0 720 > th dose dependent rect. 18 1
18 15.15 radiation 10.0 14400 > th dose independent rect. 5 1
30 15.16 radiation 40.0 1440 > th dose dependent rect. 13 20
32 15.20 wind 9.0 1440 < th dose independent rect. 1 7
33 15.23 wind 9.0 1440 < th dose independent rect. 1 9
34 15.24 radiation 40.0 1440 > th dose dependent rect. 13 1
35 15.25 atmosphere 1010.0 90 < th dose independent rect. 15 16
36 15.26 radiation 30.0 14400 > th dose independent rect. 16 16
56 15.29 humidity 50.0 270 > th dose independent rect. 6 18
57 15.30 atmosphere 995.0 90 > th dose independent rect. 15 16
58 15.30 radiation 40.0 1440 > th dose dependent sin 12 NA
59 15.30 temperature 10.0 90 > th dose dependent rect. 6 9
60 15.32 humidity 50.0 270 > th dose independent rect. 5 20
61 15.33 radiation 30.0 14400 > th dose independent rect. 7 1
78 15.34 wind 7.0 1440 < th dose independent rect. 3 4
80 15.34 radiation 30.0 90 < th dose independent rect. 15 16
83 15.35 atmosphere 995.0 270 > th dose independent rect. 13 16
85 15.36 humidity 50.0 270 > th dose independent rect. 5 8
93 15.39 humidity 60.0 720 < th dose dependent rect. 18 2
106 15.40 humidity 50.0 90 > th dose independent rect. 7 8
109 15.41 humidity 60.0 720 < th dose independent rect. 18 1
117 15.41 humidity 50.0 270 > th dose independent rect. 16 9
124 15.41 wind 7.0 90 < th dose independent rect. 15 16
125 15.41 radiation 20.0 10 < th dose independent rect. 15 16
127 15.42 temperature 15.0 90 > th dose independent rect. 15 16
131 15.43 temperature 25.0 270 < th dose independent rect. 1 4
134 15.43 temperature 10.0 10 > th dose dependent rect. 7 8
136 15.44 temperature 20.0 90 > th dose independent rect. 7 8
139 15.44 radiation 20.0 1440 < th dose independent rect. 16 18
142 15.45 temperature 10.0 90 > th dose independent rect. 7 8
144 15.45 atmosphere 1015.0 90 < th dose independent rect. 7 8
145 15.45 precipitation 0.1 90 < th dose independent rect. 7 8
153 15.45 precipitation 0.1 90 < th dose dependent rect. 7 8
154 15.46 atmosphere 995.0 10 > th dose independent rect. 15 16
161 15.46 radiation 40.0 1440 < th dose independent rect. 13 20
163 15.46 wind 5.0 30 < th dose dependent rect. 24 7
165 15.47 wind 9.0 90 < th dose independent rect. 7 8
170 15.48 humidity 50.0 10 > th dose independent rect. 7 8
174 15.49 precipitation 0.1 90 < th dose independent rect. 15 16
175 15.49 radiation 40.0 1440 > th dose independent rect. 13 20
178 15.49 precipitation 0.1 90 < th dose dependent rect. 15 16
180 15.50 wind 9.0 43200 > th dose independent rect. 11 2
181 15.50 radiation 20.0 1440 < th dose independent rect. 7 3
184 15.50 temperature 15.0 270 > th dose independent rect. 13 16
189 15.50 wind 7.0 43200 > th dose dependent rect. 11 1
192 15.51 wind 7.0 270 < th dose independent rect. 13 16
196 15.51 wind 9.0 30 < th dose dependent rect. 24 19
197 15.52 wind 7.0 43200 < th dose independent rect. 11 1
199 15.52 atmosphere 995.0 90 > th dose independent rect. 7 8
203 15.52 wind 3.0 30 < th dose dependent rect. 2 5
207 15.53 wind 9.0 270 < th dose independent rect. 5 8
208 15.53 temperature 10.0 270 > th dose independent rect. 5 8
210 15.53 atmosphere 995.0 270 > th dose independent rect. 5 8
211 15.53 atmosphere 1015.0 270 < th dose independent rect. 5 8
213 15.53 radiation 1.0 90 > th dose independent rect. 15 15
217 15.53 temperature 15.0 10 > th dose independent rect. 15 16
221 15.53 radiation 1.0 1440 > th dose dependent sin 8 NA
238 15.53 radiation 1.0 1440 > th dose dependent rect. 16 20
241 15.54 wind 1.0 90 < th dose independent rect. 4 1
244 15.54 precipitation 0.1 270 < th dose independent rect. 5 8
253 15.54 radiation 1.0 1440 > th dose dependent rect. 7 1
254 15.54 wind 1.0 90 < th dose dependent rect. 4 2
268 15.54 precipitation 0.1 270 < th dose dependent rect. 5 8
289 15.54 radiation 30.0 1440 < th dose dependent rect. 16 20
292 15.55 radiation 20.0 1440 < th dose independent sin 10 NA
294 15.55 wind 9.0 43200 > th dose independent rect. 15 1
302 15.55 wind 9.0 1440 < th dose independent rect. 3 7
306 15.55 wind 1.0 90 > th dose independent rect. 7 8
353 15.55 humidity 90.0 90 > th dose dependent rect. 4 1
354 15.55 radiation 30.0 1440 < th dose dependent rect. 7 2
355 15.55 radiation 30.0 1440 < th dose dependent rect. 7 5
357 15.55 radiation 1.0 1440 > th dose dependent rect. 6 6
362 15.56 radiation 20.0 1440 < th dose independent sin 7 NA
365 15.56 temperature 30.0 720 > th dose independent rect. 18 1
380 15.56 temperature 20.0 10 > th dose independent rect. 7 8
387 15.56 humidity 50.0 1440 > th dose independent rect. 16 9
408 15.56 wind 7.0 10 < th dose independent rect. 15 16
425 15.56 radiation 1.0 90 < th dose dependent sin 14 NA
451 15.57 radiation 40.0 1440 > th dose independent rect. 13 1
452 15.57 radiation 40.0 1440 < th dose independent rect. 13 1
454 15.57 radiation 40.0 1440 > th dose independent rect. 13 3
456 15.57 humidity 50.0 1440 > th dose independent rect. 16 5
494 15.57 wind 9.0 43200 > th dose dependent rect. 15 1
502 15.57 radiation 40.0 1440 < th dose dependent rect. 24 12
503 15.57 wind 7.0 14400 > th dose dependent rect. 23 13
508 15.57 radiation 1.0 1440 > th dose dependent rect. 16 17
513 15.57 radiation 10.0 1440 > th dose dependent rect. 16 22
517 15.58 humidity 90.0 10 > th dose independent rect. 4 2
564 15.58 radiation 40.0 1440 < th dose dependent sin 7 NA
567 15.58 wind 3.0 10 < th dose dependent rect. 4 3
576 15.58 wind 9.0 14400 > th dose dependent rect. 4 9
592 15.58 wind 7.0 14400 > th dose dependent rect. 21 16
595 15.58 wind 9.0 30 < th dose dependent rect. 2 17
608 15.59 wind 5.0 30 < th dose independent rect. 24 7
619 15.59 radiation 40.0 43200 < th dose independent rect. 16 15
621 15.59 wind 9.0 14400 > th dose independent rect. 21 16
637 15.59 radiation 40.0 1440 > th dose dependent no NA NA
643 15.59 radiation 40.0 1440 > th dose dependent rect. 8 7
816 15.60 wind 7.0 14400 < th dose independent rect. 1 11
817 15.60 radiation 40.0 1440 < th dose independent rect. 13 12
818 15.60 wind 7.0 14400 < th dose independent rect. 23 13
905 15.61 radiation 40.0 1440 < th dose independent rect. 13 4
906 15.61 radiation 40.0 43200 < th dose independent rect. 16 4
910 15.61 wind 9.0 14400 < th dose independent rect. 4 8
911 15.61 radiation 40.0 1440 < th dose independent rect. 13 8
920 15.61 wind 7.0 14400 > th dose independent rect. 24 12
931 15.61 humidity 50.0 1440 > th dose independent rect. 16 20
932 15.61 radiation 20.0 1440 > th dose independent rect. 16 20