BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0244300 Os02g0244300|AK121968
(975 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 1811 0.0
Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 382 e-105
Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hyd... 361 2e-99
Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 347 2e-95
Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 225 1e-58
Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 201 2e-51
Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 197 3e-50
Os04g0647300 Similar to Ubiquitin-specific protease 22 134 2e-31
Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrola... 129 1e-29
Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrola... 116 1e-25
Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 111 2e-24
Os07g0661300 Similar to Ubiquitin-specific protease 24 109 1e-23
Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 87 5e-17
Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrola... 86 1e-16
Os03g0192800 Similar to Ubiquitin-specific protease 26 80 7e-15
Os12g0621000 Similar to Ubiquitin-specific protease 8 (Frag... 74 5e-13
>Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 975
Score = 1811 bits (4690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 876/975 (89%), Positives = 876/975 (89%)
Query: 1 MLQPRESDXXXXXXXXXXXXXXAYFLLGRWHDAVSKKARVSVLAQRAAEETFKVETMATP 60
MLQPRESD AYFLLGRWHDAVSKKARVSVLAQRAAEETFKVETMATP
Sbjct: 1 MLQPRESDVPVLFVVFIVLPVIAYFLLGRWHDAVSKKARVSVLAQRAAEETFKVETMATP 60
Query: 61 DVILPGPSLRPMPYMRSAPSARPEYHECATCHGPAKTRCSRCKSVRYCSGKCQIIHWRQG 120
DVILPGPSLRPMPYMRSAPSARPEYHECATCHGPAKTRCSRCKSVRYCSGKCQIIHWRQG
Sbjct: 61 DVILPGPSLRPMPYMRSAPSARPEYHECATCHGPAKTRCSRCKSVRYCSGKCQIIHWRQG 120
Query: 121 HKQTCQQWNGFGTSSSGGLPPTENTEQMPFLSNLNSPLRGSDVHLHDMDFDTMSEPSFVT 180
HKQTCQQWNGFGTSSSGGLPPTENTEQMPFLSNLNSPLRGSDVHLHDMDFDTMSEPSFVT
Sbjct: 121 HKQTCQQWNGFGTSSSGGLPPTENTEQMPFLSNLNSPLRGSDVHLHDMDFDTMSEPSFVT 180
Query: 181 TDSYNLDTSPFLSDRSNMNKPNQFLHTSENGAAIGSYEKNDYSIDGEVPSSEILXXXXXX 240
TDSYNLDTSPFLSDRSNMNKPNQFLHTSENGAAIGSYEKNDYSIDGEVPSSEIL
Sbjct: 181 TDSYNLDTSPFLSDRSNMNKPNQFLHTSENGAAIGSYEKNDYSIDGEVPSSEILSGNKGL 240
Query: 241 XXXXXXXXXXXXRDVIYPLNSVVHQPNNYAPEIRKRPKASITVYESDKGVYLTSDMISSG 300
RDVIYPLNSVVHQPNNYAPEIRKRPKASITVYESDKGVYLTSDMISSG
Sbjct: 241 NNSSGSGENCGNRDVIYPLNSVVHQPNNYAPEIRKRPKASITVYESDKGVYLTSDMISSG 300
Query: 301 EGPYASAAESLQRSNSSGNVTGKGNMIHKKPPYPXXXXXXXXXXXXXXLTSHQYDGHEKN 360
EGPYASAAESLQRSNSSGNVTGKGNMIHKKPPYP LTSHQYDGHEKN
Sbjct: 301 EGPYASAAESLQRSNSSGNVTGKGNMIHKKPPYPSGKVSSSQKSQEKVLTSHQYDGHEKN 360
Query: 361 PHNKNEQRSTKTAVSTNSSLQGCNGISKAGASKVEALKKPSKFLKTSLVGLINDNKRSKV 420
PHNKNEQRSTKTAVSTNSSLQGCNGISKAGASKVEALKKPSKFLKTSLVGLINDNKRSKV
Sbjct: 361 PHNKNEQRSTKTAVSTNSSLQGCNGISKAGASKVEALKKPSKFLKTSLVGLINDNKRSKV 420
Query: 421 LFPYEDLVKFFQYEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCS 480
LFPYEDLVKFFQYEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCS
Sbjct: 421 LFPYEDLVKFFQYEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCS 480
Query: 481 KNWCLMCELEQYASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQG 540
KNWCLMCELEQYASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQG
Sbjct: 481 KNWCLMCELEQYASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQG 540
Query: 541 ACLDGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWV 600
ACLDGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWV
Sbjct: 541 ACLDGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWV 600
Query: 601 ESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGK 660
ESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGK
Sbjct: 601 ESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGK 660
Query: 661 INKCVTFPDMLDMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLR 720
INKCVTFPDMLDMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLR
Sbjct: 661 INKCVTFPDMLDMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLR 720
Query: 721 IDDSEVQAVSLNQVMSEGAYMLFYMRSFPRPPKIYIEKGLSSVPTCXXXXXXXXXXXXXQ 780
IDDSEVQAVSLNQVMSEGAYMLFYMRSFPRPPKIYIEKGLSSVPTC Q
Sbjct: 721 IDDSEVQAVSLNQVMSEGAYMLFYMRSFPRPPKIYIEKGLSSVPTCSKRHSSKSSKGSKQ 780
Query: 781 DLNHTESLFASSDQTYGIYDFRPDNGYIQDQHAALRTRNFYHTDDAFADSISTDFSDAXX 840
DLNHTESLFASSDQTYGIYDFRPDNGYIQDQHAALRTRNFYHTDDAFADSISTDFSDA
Sbjct: 781 DLNHTESLFASSDQTYGIYDFRPDNGYIQDQHAALRTRNFYHTDDAFADSISTDFSDATS 840
Query: 841 XXXXXXXXXXXXXXXXXXXXXXXXVVDYGDNAGLDPISSIFGPYYAQDHPPGSFASCTRL 900
VVDYGDNAGLDPISSIFGPYYAQDHPPGSFASCTRL
Sbjct: 841 SEWSLFTSSDESSFTTESTRDSFSVVDYGDNAGLDPISSIFGPYYAQDHPPGSFASCTRL 900
Query: 901 SPSNPQTRYFQENTGFVSDSSMPAHLPGNVHRGRYPDRACXXXXXXXXXXXXXXVYGRYG 960
SPSNPQTRYFQENTGFVSDSSMPAHLPGNVHRGRYPDRAC VYGRYG
Sbjct: 901 SPSNPQTRYFQENTGFVSDSSMPAHLPGNVHRGRYPDRACSSSAEPPASANPRSVYGRYG 960
Query: 961 LSREGFVQTSGFCQM 975
LSREGFVQTSGFCQM
Sbjct: 961 LSREGFVQTSGFCQM 975
>Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 944
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 243/346 (70%), Gaps = 4/346 (1%)
Query: 416 KRSKVLFPYEDLVKFFQYEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHS 475
K +KV+FPY++ +K + P GL NCGNSC+AN VLQCL CT+PL YLL HS
Sbjct: 54 KLNKVIFPYDEFLKLCNWRDLDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHS 113
Query: 476 KDCCSK--NWCLMCELEQYASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRH 533
++C + +WC +CEL+ + ES P +P ILS+L NIG LG G QEDAHEF+R
Sbjct: 114 RECYKRHEDWCFLCELQCHIQRASESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRF 173
Query: 534 LVMSMQGACLDGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLT 593
+ MQ ACLD GGEK V+ S QETTLIQ +FGGRL+S+V+C C S RYEN+MDLT
Sbjct: 174 AIDKMQSACLDEFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLT 233
Query: 594 LEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRF 653
+EIHG +SL++ L +FTA E LDG+N YKC CS YVKA+K+L+V++ PNILT+ LKRF
Sbjct: 234 VEIHGDADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRF 293
Query: 654 QTGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKD 713
Q+G++GK+NK VTFP LD+ P+++ D Y LYAVVVH+D NASF GHYI Y+K+
Sbjct: 294 QSGRFGKLNKRVTFPMKLDLTPYMSST-DGSDQYDLYAVVVHLDMLNASFFGHYICYIKN 352
Query: 714 MQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYMRSFPRP-PKIYIEK 758
+G W +IDD +V AV +V ++GAYML Y R RP P I +E+
Sbjct: 353 YRGRWYKIDDCKVMAVDEEEVHAQGAYMLLYSRRTARPRPLIAVEE 398
>Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 978
Score = 361 bits (926), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/392 (47%), Positives = 253/392 (64%), Gaps = 18/392 (4%)
Query: 373 AVSTNSSLQGCNGISKAGASKVEALKKPSKFLKTSLVGLINDNKRSKVL---------FP 423
+V+ NSS + N I++ + E + L TSL ++ KV+ FP
Sbjct: 376 SVTPNSSKRADN-IAERNSKPSEKSISTANSLATSLKKIVRQQTAPKVVRHYPSEPTHFP 434
Query: 424 YEDLVKFFQYEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNW 483
YE +K YE + P GL N GNSCYANAVLQCLM T+PL YLL LHSK+C K W
Sbjct: 435 YELFIKL--YEKVELQPFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEW 492
Query: 484 CLMCELEQYASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL 543
C MCE E+ R+ +SP+ ILS+L +IG G G QEDAHEFLR+ + +MQ C+
Sbjct: 493 CFMCEFEKLVGEGRQGKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM 552
Query: 544 DGL--GGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVE 601
G ++ +ETTL+Q +FGG L+SK++C RC SE++E I+DLT+EI G +
Sbjct: 553 KEARKSGTHRLH---EETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDIS 609
Query: 602 SLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKI 661
SL+ AL +FT+ E LDG+N YKC RC ++ +A+K+L++ E PN+LT+ LKR+Q+GK+GKI
Sbjct: 610 SLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKI 669
Query: 662 NKCVTFPDMLDMVPFVT-GAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLR 720
NK + FP+ L++ +++ A D P+Y LYAVVVH D NA+FSGHY+ YVKD G W +
Sbjct: 670 NKAIRFPETLNLQRYMSPKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYK 729
Query: 721 IDDSEVQAVSLNQVMSEGAYMLFYMRSFPRPP 752
DDS+V+ VSL VMS+ AYML Y R PR P
Sbjct: 730 TDDSQVKPVSLENVMSKCAYMLLYARCSPRAP 761
>Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 918
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/345 (49%), Positives = 229/345 (66%), Gaps = 14/345 (4%)
Query: 421 LFPYEDLVKFFQYEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDC-- 478
LFPYE VK + ++ + P GL N GNSCYANAVLQCL T+PL YL LHS++C
Sbjct: 362 LFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNL 421
Query: 479 -----------CSKNWCLMCELEQYASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDA 527
K WC MCE E+ R +SP+ ILS+LR+IG G G +EDA
Sbjct: 422 ILSQNCVTYHGSKKEWCFMCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDA 481
Query: 528 HEFLRHLVMSMQGACLDGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYE 587
HEFLR+ + +MQ A + + V +ETTL+Q +FGG L+SK+KC C SE+ E
Sbjct: 482 HEFLRYAIDTMQSASMKE-AKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCE 540
Query: 588 NIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILT 647
I+DLT+EI G + +L++AL +FT+ E LDG+N Y C RC +Y +A+K+L++ E PNILT
Sbjct: 541 RILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILT 600
Query: 648 VVLKRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHY 707
+ LKR+Q+G +GKINK V F + L++ +++ A D P+Y LYAVVVH D NA+FSGHY
Sbjct: 601 IALKRYQSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHY 660
Query: 708 ISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYMRSFPRPP 752
+ YVKD QG W ++DDS+V+ VSL +V+S+ AYMLFY R PR P
Sbjct: 661 VCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPRAP 705
>Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 899
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 181/309 (58%), Gaps = 10/309 (3%)
Query: 442 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAST-LRESG 500
GL N GN+CY N+VLQCL T+P YL H C + +C +C L+ + T L+ +G
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTG 119
Query: 501 GPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL-DGLGGEKQVEASLQET 559
V+PS+I+ NLR I QEDAHE + +L+ SM CL G+ E S E
Sbjct: 120 KIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSE---SPSAYEK 176
Query: 560 TLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLD-G 618
+L+ ++FGGRL+S+VKC +C H S +++ +DL+L+I G SL AL FTA E LD G
Sbjct: 177 SLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI-GKATSLVRALQNFTAEELLDGG 235
Query: 619 ENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQT-GKYGKINKCVTFPDMLDMVPFV 677
E Y+C RC V A+K+ ++ + P +LT+ LKRF KI+K V F MLD+ PF+
Sbjct: 236 EKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFI 295
Query: 678 TGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSE 737
+ + Y LY V+VH + SGHY +V+ G W +DD++V+ V V+ +
Sbjct: 296 SDSKGADFKYSLYGVLVHAGWN--TQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ 353
Query: 738 GAYMLFYMR 746
AYMLFY+R
Sbjct: 354 KAYMLFYVR 362
>Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1185
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 171/317 (53%), Gaps = 8/317 (2%)
Query: 442 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYA-STLRESG 500
GL N GN+CY N+VLQCL T+P + YL H C + +C +C L+++ S L+ +G
Sbjct: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSALQSTG 146
Query: 501 GPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQVEASLQETT 560
+ P I+ NLR I QEDAHE + L+ SM CL G S E +
Sbjct: 147 KILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLP--SGVPSGSPSAYEKS 204
Query: 561 LIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLD-GE 619
L+ ++FGG L+S+V+C C H S +++ +DL+LEI +L AL FTA E LD GE
Sbjct: 205 LVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIAN-AATLVKALQHFTAEELLDGGE 263
Query: 620 NMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQT-GKYGKINKCVTFPDMLDMVPFVT 678
Y C C V A+K+ + + P++LT+ LKRF KI+K V F L++ P+V+
Sbjct: 264 KQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQFQPTLNLKPYVS 323
Query: 679 GAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEG 738
Y LY V+VH SGHY +V+ G W +DD++V V V+ +
Sbjct: 324 NPEGMEFKYSLYGVLVHAGWNTQ--SGHYYCFVRTSSGIWHNLDDNKVYQVREADVLRQK 381
Query: 739 AYMLFYMRSFPRPPKIY 755
AYMLFY+R R +Y
Sbjct: 382 AYMLFYVRDRTRSSVMY 398
>Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 644
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 174/324 (53%), Gaps = 23/324 (7%)
Query: 443 LFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDC-----CSKNWCLMCELEQYASTL- 496
L N GN+CY N+VLQCL T PL + L HS C C+ C +E+ S L
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPNKDKECVFCVVERQISRLL 84
Query: 497 -RESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL-----------D 544
E+G SP++I+ L G QEDAHEFLR+++ + A L +
Sbjct: 85 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 144
Query: 545 GLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQ 604
G GE++V ++++ FGG L S+VKCL C ES + + IMD++L++ G S+
Sbjct: 145 GDAGEEEVRVQ-GPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPG-SNSVA 202
Query: 605 DALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKC 664
DAL +F PE L+G N Y C RC ARKQL V P +L + LKRF+ GKIN+
Sbjct: 203 DALARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRN 262
Query: 665 VTFPDMLDMVPFVTGAG-DNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDD 723
+ F + L + F+ D+ P+Y L+ +VH + + SGHY +YVKD G W +D
Sbjct: 263 IEFKETLFLSDFMYNKNQDSLPVYNLFGSIVH--SGFSPDSGHYYAYVKDAIGRWYCCND 320
Query: 724 SEVQAVSLNQVMSEGAYMLFYMRS 747
S + S V+SE Y+LFY+ S
Sbjct: 321 SHISPSSSQDVLSEKVYILFYILS 344
>Os04g0647300 Similar to Ubiquitin-specific protease 22
Length = 591
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 161/372 (43%), Gaps = 73/372 (19%)
Query: 441 RGLFNCGNSCYANAVLQCLMCTKPLMIYLL--------------LRLHSKDCCSKNWCLM 486
RGL N GN+C+ N+VLQ L+ PL Y L +R S + K CL
Sbjct: 211 RGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLA 270
Query: 487 CELEQ-YASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDG 545
C+L++ Y++ P SP++ L + L Q+DAHEF ++ + D
Sbjct: 271 CDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKD- 329
Query: 546 LGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGW------ 599
K + + + ++F G L+S V C C S +E MD++L++
Sbjct: 330 -DQHKSLAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLG 388
Query: 600 ---------------------VESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLS 638
V +L L +FT E LD E + C RC ++ KQ+S
Sbjct: 389 VANPKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMS 448
Query: 639 VHEVPNILTVVLKRFQTGKYGKINK----CVTFPDMLDMVPFVTG--------------- 679
+ +P + +KRF+ K+++ C+ FP LDM P+++
Sbjct: 449 IRRLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSE 508
Query: 680 AGDNPPL------YFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQ 733
A D + + ++AV++H A GHY++Y++ + W + DD+ V V +
Sbjct: 509 ASDADSVSEFSSEFEIFAVIMHSGKLEA---GHYVTYLR-LNNHWYKCDDAWVTRVEEHT 564
Query: 734 VMSEGAYMLFYM 745
V + AYMLFY+
Sbjct: 565 VRTSQAYMLFYV 576
>Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 3) (AtUBP3)
Length = 366
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 161/348 (46%), Gaps = 57/348 (16%)
Query: 442 GLFNCGNSCYANAVLQCLMCTKP----LMIYLLLRLHSKDCCSKNWCLMCELEQYASTLR 497
GL N GN+CY N+VLQ L P L+ Y + D + +L S +
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNMLTCLADLFSQISNQK 83
Query: 498 ESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQVEA--- 554
+ G ++P R + L+ +DAHEFL L+ + +D L E +V A
Sbjct: 84 KKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNEL----VDILEKESKVVAEPC 139
Query: 555 ---SLQET------------------TLIQQMFGGRLKSKVKCLRCYHESERYENIMDLT 593
SL++ TL+ + F G L ++ +CLRC ++R E DL+
Sbjct: 140 ENSSLKKNSNGPINVQLNGTKKEPVPTLVHKCFQGILTNETRCLRCETVTDRDETFFDLS 199
Query: 594 LEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRF 653
L+I S+ L F++ E L+ E+ + C +C + +A+K++ + + PNIL + LKRF
Sbjct: 200 LDIE-QNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRF 258
Query: 654 ----QTGKYGKINKCVTFPDMLDMVPFVTGAGDNPPL-YFLYAVVVHVDTENASFSGHYI 708
Q G+Y K++ V FP L ++ V DN L Y L+AV+VHV + GHYI
Sbjct: 259 KYIEQLGRYKKLSYRVVFPLELKLINTV----DNSDLEYSLFAVLVHVGS--GPNHGHYI 312
Query: 709 SYVKDMQGTWLRIDDSEVQAVSLNQVM------------SEGAYMLFY 744
S VK WL DD V+ + V ++ Y+LFY
Sbjct: 313 SLVKS-HNHWLFFDDENVEMTDESMVQTFFGSAQEFSGNTDNGYILFY 359
>Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 4) (AtUBP4)
Length = 367
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 152/347 (43%), Gaps = 56/347 (16%)
Query: 442 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSK----DCCSKNWCLMCELEQYASTLR 497
GL N GN+CY N+VLQ L P LL + D + +L S +
Sbjct: 26 GLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKTPGDAEENLLTCLADLFMQVSQSK 85
Query: 498 ESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQVEASLQ 557
+ G ++P R + ++ +DAHEFL L+ + +D L E
Sbjct: 86 KKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNEL----VDILEKESNAAKDSP 141
Query: 558 ET------------------------TLIQQMFGGRLKSKVKCLRCYHESERYENIMDLT 593
++ TL+ + F G L ++ +CLRC + R E DL+
Sbjct: 142 QSSSPEKVPNGPVQPLANGVRKEPPVTLVHKNFQGILTNETRCLRCETVTARDETFFDLS 201
Query: 594 LEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRF 653
++I S+ L F + E L+ E+ + C +C + +A+K++ + + P+IL + LKRF
Sbjct: 202 VDIE-QNSSITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRF 260
Query: 654 ----QTGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYIS 709
Q G+Y K++ V FP L + + + D Y L+AVVVHV + GHY+S
Sbjct: 261 KYIEQLGRYKKLSYRVVFPMELKL----STSDDVDTEYSLFAVVVHVGS--GPNHGHYVS 314
Query: 710 YVKDMQGTWLRIDDSEVQAVSLNQVM------------SEGAYMLFY 744
VK WL DD V+ V + + ++ Y+LFY
Sbjct: 315 LVKS-HNHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGYILFY 360
>Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 415
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 55/349 (15%)
Query: 442 GLFNCGNSCYANAVLQ----CLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYASTLR 497
GL N GN+CY N+VLQ C+ + L+ Y +++D + +L + +
Sbjct: 73 GLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKNTEDSEDNLLTCLADLFSQITLAK 132
Query: 498 ESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQVEASLQ 557
+ G ++P R + +R +DAHEF LV + +D L + + S
Sbjct: 133 KRTGVLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFLVNDI----IDILEEDCRTANSSP 188
Query: 558 ETT-----------------------LIQQMFGGRLKSKVKCLRCYHESERYENIMDLTL 594
ETT L+ + F G L ++ KCL C + + E DL++
Sbjct: 189 ETTPEEVSNGAANALANGARERPLVTLVHRTFQGILTNETKCLMCDTITAKDETFFDLSI 248
Query: 595 EIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRF- 653
++ SL L F + E L+GE+ + C +CS+ +A K++ + + P++L + LKRF
Sbjct: 249 DVEQ-NSSLTSCLKSFFSTEILNGEDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFK 307
Query: 654 ---QTGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISY 710
Q ++ K++ V +P L + + D Y L+AVVVHV + + GHY+S
Sbjct: 308 YVEQLSRHKKLSYRVVYPLELKLGSM---SEDADCEYSLFAVVVHVGS--SPNHGHYVSQ 362
Query: 711 VKDMQGTWLRIDDSEVQAVSLNQVM-------------SEGAYMLFYMR 746
+K G WL DD VQ + + ++ Y+LFY R
Sbjct: 363 IKS-HGNWLSFDDDTVQISEESTLQTFYGSSREHCGGNTDHGYILFYER 410
>Os07g0661300 Similar to Ubiquitin-specific protease 24
Length = 489
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 164/382 (42%), Gaps = 70/382 (18%)
Query: 423 PYEDLVKFFQ---YEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCC 479
P ++LV + + + P GL N GN C+ N+ LQ L+ P + LL L +++
Sbjct: 115 PVDELVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQALLSCWPF-VQLLQNLRNQNIP 173
Query: 480 SKNWCLMCEL------------------EQYASTLRESGGPVSPSRILSNLRNIGCRLGG 521
+ + E++A+ +S V PS + LRN +
Sbjct: 174 KAGYPTLNAFIEFISQFDVLDDSNVKKDEKFATIASKS---VIPSMFDTVLRNFTPDVPA 230
Query: 522 GS-----QEDAHEFLRHLVMSMQGAC--LDGLG--------------------GEKQVEA 554
G+ QEDA EFL + M L+G G G+K A
Sbjct: 231 GTASRPRQEDAQEFLSFAMDRMHDELVKLNGNGSNSKEGMIVSSNDDDAWETVGKKNKSA 290
Query: 555 SLQETTLI----QQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIH-GWVESLQDALTQ 609
++ + + +FGG+L+S VK S + + L+I V+ L DAL
Sbjct: 291 IMRSQSFVPSELTAIFGGQLQSCVKA-TGNKASVTVQPFRLIHLDIFPDAVQKLDDALRL 349
Query: 610 FTAPEDLDGENMYKCGRCSA-YVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVT 666
F APE L+G Y+ A V ARK + +H + I+ + LKRF G +G K+ K +
Sbjct: 350 FAAPESLEG---YRTAAGKAGLVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIH 406
Query: 667 FPDML----DMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRID 722
FP L D++ + Y L A + H+ + GHY + K G WLR D
Sbjct: 407 FPLELVLSRDLLSSPSSEHMQSRRYELVATITHLGANPSR--GHYTADAKSASGQWLRFD 464
Query: 723 DSEVQAVSLNQVMSEGAYMLFY 744
D V VSLN+V+ + AY+LFY
Sbjct: 465 DDNVTPVSLNKVLHDQAYVLFY 486
>Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 500
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 15/189 (7%)
Query: 565 MFGGRLKSKVKCLRCYHESERYENIMDLTLEI----HGWVESLQDALTQFTAPEDLDGEN 620
MFGG+ + C +C S E+ L I +L+D L E+ ++
Sbjct: 1 MFGGKFRRSKVCSKCGMLSNSEEDFTLLMFNIPHREQVVAATLEDCLDHIV--EENVHDS 58
Query: 621 MYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQ---TGKYGKINKCVTFPDMLDMVPFV 677
+ +C C K+ + + HE +++ +VL+RF+ G Y KI + + FP LD+ P++
Sbjct: 59 LSRCESCMNDQKSTSKCTFHETRDVV-IVLQRFEPLTLGGYRKIGELINFPTELDISPYM 117
Query: 678 TGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSE 737
+G + +Y L+ ++VH E GHY SYVK W + D +V+ V+ N V+
Sbjct: 118 SGVVTDKHIYELFGIIVH---EGGVIGGHYRSYVK--TNCWYEVSDRDVKRVNENFVLGA 172
Query: 738 GAYMLFYMR 746
AY+LFY R
Sbjct: 173 QAYILFYNR 181
>Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)
(Ubiquitin thiolesterase 12) (Ubiquitin-specific
processing protease 12) (Deubiquitinating enzyme 12)
Length = 931
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 607 LTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKY--GKINKC 664
L F E L ++M+ C RC+ + +A K+L + +P IL V LKRF ++ K++
Sbjct: 766 LDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTF 825
Query: 665 VTFP-DMLDMVPFVTGA-GDNPPLYFLYAVVVHVDTENASFSGHYISYVKDM-QGTWLRI 721
V FP LDM + + GD PP+Y LYAV+ H GHY +Y K + + +W
Sbjct: 826 VNFPIHDLDMSRYANHSRGDQPPIYELYAVINHY---GGMGGGHYSAYAKLVEEDSWYHF 882
Query: 722 DDSEVQAVSLNQVMSEGAYMLFYMR 746
DDS V +V + + AY+LFY R
Sbjct: 883 DDSHVSSVGEEDIRTSSAYLLFYRR 907
>Os03g0192800 Similar to Ubiquitin-specific protease 26
Length = 311
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 439 SPRGLFNCGNSCYANAVLQCLMCTKPLMIYL------LLRLHSKDCCSKNWCLMCELEQY 492
+P GL N G +CYAN++LQCL + + +L++H ++ +L +
Sbjct: 104 TPAGLTNLGATCYANSILQCLYMNTSFRLGIFSLEPDILKMHP---------VLDQLARL 154
Query: 493 ASTLRESG-GPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQ 551
+ L S + + + L L G Q+D+HEFL L +S+ L+G +
Sbjct: 155 FAQLHSSKMAFIDSAPFIKTLE-----LDNGVQQDSHEFLT-LFLSL----LEGSLSHSK 204
Query: 552 VEASLQETTLIQQMFGGRLKSKVKCLRCYHESE---RYENIMDLTLEIHGWVESLQDALT 608
V + T++Q +F G + +C C +SE + E+ +L L I G + +L+ +L
Sbjct: 205 VPGA---RTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKG-LNNLEQSLD 260
Query: 609 QFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRF 653
+ + E LDGEN Y C C V A + + + +P ++ LKR+
Sbjct: 261 DYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRY 305
>Os12g0621000 Similar to Ubiquitin-specific protease 8 (Fragment)
Length = 864
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 602 SLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKY--G 659
SL L F E L E+M+ C C + +A K+L + +P IL + LKRF +Y
Sbjct: 696 SLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTKN 755
Query: 660 KINKCVTFP-DMLDMVPFVTGAGDN-PPLYFLYAVVVHVDTENASFSGHYISYV-KDMQG 716
K+ CV FP LD+ ++ G Y LYA+ H + GHY +YV + +
Sbjct: 756 KLETCVDFPVHDLDLSKYIGSRGQQISNHYRLYAISNHYGSMGG---GHYTAYVYHEGKK 812
Query: 717 TWLRIDDSEVQAVSLNQVMSEGAYMLFYMR 746
W DD V +S + + AY+LFY R
Sbjct: 813 GWYDFDDRHVGPISEESIKTSAAYVLFYRR 842
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 32,414,917
Number of extensions: 1343540
Number of successful extensions: 3263
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 3229
Number of HSP's successfully gapped: 17
Length of query: 975
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 865
Effective length of database: 11,292,261
Effective search space: 9767805765
Effective search space used: 9767805765
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)