Os11g0545300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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Os11g0545300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.81 | 0.345 | 10.5 | -1.04 | 0.662 | 0.307 | 0.36 | 1.72 | 0.411 | 17.3 | 69.46 | 6075 | -- | -- |
| 58 | 0.355 | 10.5 | -0.819 | 0.66 | 0.446 | 0.143 | -- | 0.471 | 17.5 | 67 | 6805 | -- | -- |
| 54.1 | 0.343 | 10.5 | -1.03 | 0.659 | 0.309 | -- | 1.68 | 0.413 | 17.3 | 68.35 | 5997 | -- | -- |
| 57.37 | 0.353 | 10.5 | -0.836 | 0.718 | 0.398 | -- | -- | 0.468 | 17.5 | 41.42 | 19142 | -- | -- |
| 74.46 | 0.402 | 10.5 | -1.26 | -- | 0.162 | -- | 1.91 | 0.294 | -- | 70.68 | 16991 | -- | -- |
| 60.66 | 0.365 | 10.5 | -0.757 | 0.643 | -- | 0.22 | -- | 0.347 | 17.3 | -- | -- | -- | -- |
| 60.78 | 0.365 | 10.5 | -0.757 | 0.645 | -- | -- | -- | 0.348 | 17.3 | -- | -- | -- | -- |
| 77.22 | 0.411 | 10.5 | -0.767 | -- | -0.289 | -- | -- | 0.308 | -- | 70.68 | 16991 | -- | -- |
| 73.83 | 0.4 | 10.5 | -- | 0.667 | 0.279 | -- | -- | 0.542 | 17.2 | 68.99 | 18978 | -- | -- |
| 82.47 | 0.424 | 10.5 | -0.78 | -- | -- | -- | -- | 0.332 | -- | -- | -- | -- | -- |
| 75.89 | 0.408 | 10.5 | -- | 0.658 | -- | -- | -- | 0.432 | 17.3 | -- | -- | -- | -- |
| 88.66 | 0.439 | 10.5 | -- | -- | 0.525 | -- | -- | 0.521 | -- | 95 | 47520 | -- | -- |
| 98.5 | 0.463 | 10.5 | -- | -- | -- | -- | -- | 0.418 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 2 | 49.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 3 | 49.89 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 4 | 49.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 5 | 49.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 6 | 50.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 7 | 50.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 8 | 50.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 9 | 50.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 10 | 50.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 12 | 50.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 13 | 50.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 16 | 50.33 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 22 | 50.43 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 23 | 50.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 24 | 50.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 26 | 50.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 27 | 50.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 29 | 50.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 31 | 50.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 36 | 50.56 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 38 | 50.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 42 | 50.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 44 | 50.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 47 | 50.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 54 | 50.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 79 | 50.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 82 | 50.93 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 87 | 50.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 88 | 50.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 111 | 51.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 125 | 51.17 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 145 | 51.25 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 167 | 51.35 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 247 | 51.65 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 253 | 51.67 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 257 | 51.68 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 259 | 51.69 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 274 | 51.71 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 317 | 51.84 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 371 | 51.96 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 3 | NA |
| 372 | 51.96 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 3 | NA |
| 374 | 51.96 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 3 | NA |
| 388 | 51.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 392 | 51.99 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 466 | 52.09 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 485 | 52.13 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 499 | 52.15 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 515 | 52.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 519 | 52.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 521 | 52.18 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 524 | 52.19 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 556 | 52.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 557 | 52.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 569 | 52.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 574 | 52.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 577 | 52.25 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 580 | 52.26 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 593 | 52.28 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 620 | 52.31 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 630 | 52.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 692 | 52.38 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 707 | 52.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 728 | 52.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 752 | 52.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 769 | 52.44 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 18 |
| 797 | 52.48 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 798 | 52.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 894 | 52.57 | humidity | 90.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 913 | 52.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 949 | 52.61 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 4 |