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Os09g0464400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.52 (0.0191) R2 : 0.0231
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.132 (0.0402) R2dN8 : 0.0299 R2N8 : 0.0231
σ : 0.36
deviance : 59.33
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C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.56 0.276 8.43 1.1 0.457 0.221 -0.392 -1.82 0.427 0.424 23.09 2057 -- --
41.11 0.299 8.5 0.608 0.452 0.3 -0.302 -- 0.276 0.636 21.3 10707 -- --
35.12 0.276 8.43 1.09 0.455 0.222 -- -1.76 0.421 0.369 23.04 1928 -- --
40.81 0.298 8.49 0.723 0.451 0.39 -- -- 0.284 0.43 19 22355 -- --
47.98 0.323 8.43 1.08 -- 0.208 -- -1.71 0.414 -- 23.02 1719 -- --
42.66 0.306 8.52 0.351 0.446 -- -0.3 -- 0.165 0.535 -- -- -- --
43.04 0.307 8.52 0.363 0.446 -- -- -- 0.167 0.448 -- -- -- --
52.52 0.338 8.48 0.834 -- 0.51 -- -- 0.302 -- 15.9 42034 -- --
42.9 0.305 8.58 -- 0.459 -0.306 -- -- -0.0225 0.928 27.5 47520 -- --
55.56 0.348 8.51 0.378 -- -- -- -- 0.174 -- -- -- -- --
46.51 0.319 8.53 -- 0.452 -- -- -- 0.126 0.488 -- -- -- --
52.2 0.338 8.51 -- -- 0.286 -- -- 0.172 -- 27.52 47520 -- --
59.33 0.36 8.52 -- -- -- -- -- 0.132 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.27 temperature 20.0 720 > th dose dependent sin 7 NA
3 33.62 temperature 20.0 720 > th dose dependent rect. 21 16
5 33.67 precipitation 0.1 43200 > th dose dependent rect. 19 1
9 33.85 temperature 20.0 720 > th dose dependent rect. 3 4
10 33.86 precipitation 0.1 43200 > th dose independent rect. 19 1
12 33.97 precipitation 0.1 43200 < th dose independent rect. 19 1
13 33.97 precipitation 0.1 43200 < th dose dependent rect. 19 1
25 34.12 wind 3.0 43200 > th dose independent rect. 11 3
26 34.12 temperature 20.0 720 > th dose dependent rect. 1 8
29 34.14 wind 3.0 43200 < th dose independent rect. 11 3
32 34.17 wind 3.0 43200 < th dose dependent rect. 11 2
35 34.19 humidity 90.0 43200 < th dose independent rect. 20 3
36 34.20 radiation 1.0 43200 < th dose independent rect. 17 1
38 34.22 radiation 1.0 43200 > th dose independent rect. 17 1
42 34.25 atmosphere 1015.0 43200 < th dose independent rect. 10 1
44 34.26 atmosphere 1015.0 43200 > th dose independent rect. 10 1
46 34.27 atmosphere 1015.0 43200 > th dose independent rect. 1 1
51 34.31 radiation 1.0 43200 < th dose independent rect. 17 13
59 34.39 radiation 1.0 43200 > th dose independent rect. 17 13
103 34.53 wind 1.0 43200 > th dose independent rect. 8 5
115 34.58 atmosphere 1015.0 43200 < th dose independent rect. 1 1
121 34.59 radiation 1.0 43200 < th dose independent rect. 13 17
130 34.61 humidity 80.0 43200 > th dose dependent rect. 19 1
133 34.63 radiation 1.0 43200 > th dose independent rect. 13 17
142 34.65 radiation 1.0 43200 < th dose dependent rect. 5 1
147 34.66 humidity 80.0 43200 > th dose dependent rect. 18 3
158 34.71 humidity 80.0 43200 < th dose independent rect. 13 7
160 34.71 humidity 90.0 43200 < th dose independent rect. 3 23
161 34.72 radiation 1.0 43200 < th dose independent rect. 5 1
177 34.73 radiation 1.0 43200 < th dose independent sin 13 NA
178 34.73 humidity 90.0 43200 < th dose independent rect. 19 21
179 34.74 radiation 1.0 43200 > th dose independent sin 13 NA
180 34.74 radiation 1.0 43200 > th dose independent rect. 5 1
189 34.74 humidity 90.0 43200 < th dose independent rect. 1 23
191 34.74 radiation 1.0 43200 < th dose dependent rect. 23 7
235 34.78 humidity 90.0 43200 < th dose independent rect. 11 15
248 34.79 humidity 90.0 43200 < th dose independent rect. 11 23
249 34.79 radiation 1.0 43200 < th dose dependent rect. 17 1
250 34.79 humidity 80.0 43200 > th dose dependent rect. 5 20
251 34.80 humidity 90.0 43200 < th dose independent no NA NA
252 34.80 humidity 90.0 43200 > th dose independent rect. 22 1
255 34.80 humidity 90.0 43200 < th dose independent rect. 15 23
258 34.81 humidity 90.0 43200 > th dose independent rect. 5 2
266 34.81 humidity 90.0 43200 < th dose independent rect. 8 23
268 34.81 temperature 20.0 720 > th dose dependent rect. 6 1
290 34.83 humidity 80.0 43200 > th dose independent rect. 13 7
300 34.83 humidity 80.0 43200 > th dose dependent rect. 17 6
309 34.84 humidity 90.0 43200 < th dose independent rect. 22 23
310 34.84 atmosphere 1010.0 14400 > th dose dependent rect. 3 1
315 34.85 radiation 1.0 43200 < th dose independent rect. 13 5
321 34.85 humidity 90.0 43200 < th dose independent rect. 13 23
323 34.85 wind 3.0 43200 > th dose dependent rect. 15 1
373 34.87 temperature 20.0 1440 > th dose dependent rect. 16 14
402 34.89 atmosphere 1010.0 14400 > th dose dependent rect. 10 1
406 34.89 radiation 1.0 43200 < th dose dependent rect. 17 13
446 34.92 humidity 90.0 43200 < th dose independent sin 17 NA
458 34.92 humidity 90.0 43200 < th dose independent rect. 1 15
465 34.93 humidity 90.0 43200 > th dose independent rect. 20 3
505 34.94 humidity 90.0 43200 < th dose independent sin 4 NA
515 34.94 temperature 25.0 1440 > th dose dependent rect. 16 2
519 34.95 radiation 1.0 4320 > th dose independent rect. 17 2
528 34.95 humidity 90.0 43200 < th dose independent rect. 14 10
607 34.98 atmosphere 1010.0 14400 > th dose dependent rect. 1 11
621 34.99 humidity 90.0 43200 > th dose independent rect. 19 21
678 35.00 wind 1.0 43200 > th dose dependent rect. 11 5
703 35.01 radiation 1.0 43200 > th dose independent rect. 17 21
704 35.01 radiation 1.0 43200 < th dose independent rect. 17 21
705 35.01 humidity 90.0 43200 > th dose independent rect. 4 22
720 35.02 humidity 90.0 43200 < th dose independent rect. 5 2
756 35.03 wind 1.0 43200 < th dose independent rect. 8 5
786 35.03 temperature 20.0 1440 > th dose dependent sin 14 NA
801 35.03 radiation 1.0 43200 < th dose dependent rect. 17 9
812 35.04 wind 3.0 43200 < th dose independent rect. 9 7
831 35.04 radiation 1.0 43200 < th dose dependent rect. 17 7
856 35.05 humidity 90.0 43200 > th dose independent rect. 8 23
858 35.05 atmosphere 1010.0 14400 > th dose dependent sin 7 NA
860 35.05 humidity 90.0 43200 > th dose dependent rect. 5 2
907 35.07 humidity 90.0 43200 > th dose independent rect. 11 15
914 35.07 temperature 20.0 1440 > th dose dependent rect. 18 4
928 35.08 humidity 90.0 43200 > th dose independent no NA NA
938 35.08 radiation 1.0 43200 > th dose independent rect. 5 13
963 35.08 temperature 20.0 270 > th dose dependent rect. 3 17
984 35.09 humidity 90.0 43200 > th dose independent rect. 15 23
986 35.09 humidity 90.0 43200 > th dose independent rect. 22 23
989 35.09 humidity 80.0 43200 > th dose dependent sin 19 NA
999 35.10 humidity 90.0 43200 > th dose independent sin 5 NA
1000 35.10 wind 3.0 43200 < th dose independent rect. 20 1