BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0464400 Os09g0464400|Os09g0464400
(918 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 1588 0.0
Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hyd... 736 0.0
Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 348 1e-95
Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 347 2e-95
Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 221 2e-57
Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 216 8e-56
Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 214 3e-55
Os04g0647300 Similar to Ubiquitin-specific protease 22 131 2e-30
Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrola... 130 3e-30
Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrola... 126 6e-29
Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 124 3e-28
Os07g0661300 Similar to Ubiquitin-specific protease 24 100 4e-21
Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrola... 82 2e-15
Os03g0192800 Similar to Ubiquitin-specific protease 26 82 2e-15
Os12g0621000 Similar to Ubiquitin-specific protease 8 (Frag... 82 2e-15
Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 74 4e-13
Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hyd... 73 1e-12
Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 72 2e-12
Os12g0489100 Similar to Ubiquitin-specific protease 12 67 5e-11
Os08g0528000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 67 5e-11
>Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 918
Score = 1588 bits (4111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/862 (89%), Positives = 775/862 (89%)
Query: 57 YCYARGRGGVAGAPLWTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKG 116
YCYARGRGGVAGAPLWTV VKG
Sbjct: 57 YCYARGRGGVAGAPLWTVPEVASPREDEEEEEEEEAAAVELEMPAARQAEAAAAAAAVKG 116
Query: 117 VCVVCRRPTTFRCKRCKGVKYCTFKCQISHWRQGHKDECHPPRVDARPDNITVVSSVKKG 176
VCVVCRRPTTFRCKRCKGVKYCTFKCQISHWRQGHKDECHPPRVDARPDNITVVSSVKKG
Sbjct: 117 VCVVCRRPTTFRCKRCKGVKYCTFKCQISHWRQGHKDECHPPRVDARPDNITVVSSVKKG 176
Query: 177 VGMYNSFEQSVKSSVEPAVEVNKSVAAVPELSEANLVSDGVDNERKKMRGQKASITAKVS 236
VGMYNSFEQSVKSSVEPAVEVNKSVAAVPELSEANLVSDGVDNERKKMRGQKASITAKVS
Sbjct: 177 VGMYNSFEQSVKSSVEPAVEVNKSVAAVPELSEANLVSDGVDNERKKMRGQKASITAKVS 236
Query: 237 EDVLDNNRIRSVDSSRLPTSGKACNIQDATVNENFSKTSAGXXXXXXXXXXXXXPELNHS 296
EDVLDNNRIRSVDSSRLPTSGKACNIQDATVNENFSKTSAG PELNHS
Sbjct: 237 EDVLDNNRIRSVDSSRLPTSGKACNIQDATVNENFSKTSAGSSSSRVERSTTSEPELNHS 296
Query: 297 NKQASGTDNLKSSRGLPSVSTVGTISSIHGSEKEAAMPNNRSLVKNIPRQQAAAKVVRHY 356
NKQASGTDNLKSSRGLPSVSTVGTISSIHGSEKEAAMPNNRSLVKNIPRQQAAAKVVRHY
Sbjct: 297 NKQASGTDNLKSSRGLPSVSTVGTISSIHGSEKEAAMPNNRSLVKNIPRQQAAAKVVRHY 356
Query: 357 PSEMTLFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHS 416
PSEMTLFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHS
Sbjct: 357 PSEMTLFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHS 416
Query: 417 RNCNLILSQNCVTYHGSKKEWCFMCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPG 476
RNCNLILSQNCVTYHGSKKEWCFMCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPG
Sbjct: 417 RNCNLILSQNCVTYHGSKKEWCFMCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPG 476
Query: 477 REEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSS 536
REEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSS
Sbjct: 477 REEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSS 536
Query: 537 EQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAP 596
EQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAP
Sbjct: 537 EQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAP 596
Query: 597 NILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAF 656
NILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAF
Sbjct: 597 NILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAF 656
Query: 657 SGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPRAPNSVRKMILAQD 716
SGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPRAPNSVRKMILAQD
Sbjct: 657 SGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPRAPNSVRKMILAQD 716
Query: 717 SSCTKKAKQMVDPGPPSLEGGSYLSRHQGGQSCRDHIVYDLTYTFGGSSYTVVEXXXXXX 776
SSCTKKAKQMVDPGPPSLEGGSYLSRHQGGQSCRDHIVYDLTYTFGGSSYTVVE
Sbjct: 717 SSCTKKAKQMVDPGPPSLEGGSYLSRHQGGQSCRDHIVYDLTYTFGGSSYTVVESPSPSD 776
Query: 777 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEYDYIFGSSDQMYPVSTVVIPEEHELSYS 836
MEEYDYIFGSSDQMYPVSTVVIPEEHELSYS
Sbjct: 777 SSSLFSNSDAGSTSTFSSDSTDSTRNSTSMEEYDYIFGSSDQMYPVSTVVIPEEHELSYS 836
Query: 837 RQRSSLNPSTSSQYVDQAAEVEMLHQHQHQAGRGGWDEGDVMPFFYSNQERAWRYAIFKL 896
RQRSSLNPSTSSQYVDQAAEVEMLHQHQHQAGRGGWDEGDVMPFFYSNQERAWRYAIFKL
Sbjct: 837 RQRSSLNPSTSSQYVDQAAEVEMLHQHQHQAGRGGWDEGDVMPFFYSNQERAWRYAIFKL 896
Query: 897 EADTVHHRLQLHQLEESKNLYV 918
EADTVHHRLQLHQLEESKNLYV
Sbjct: 897 EADTVHHRLQLHQLEESKNLYV 918
>Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 978
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/842 (50%), Positives = 510/842 (60%), Gaps = 93/842 (11%)
Query: 114 VKGVCVVCRRPTTFRCKRCKGVKYCTFKCQISHWRQGHKDECHPPRVDARPDNITVVSSV 173
KGVC VC RPTTFRCK+CK VKYC+FKCQI+HWRQGHK+EC PP DA D++ +S
Sbjct: 119 AKGVCAVCFRPTTFRCKQCKAVKYCSFKCQIAHWRQGHKNECRPPSTDANHDDVAELSVA 178
Query: 174 KK--------------------GVGMYNSFEQSVKSSVEPAVEV---NKSVAAV--PELS 208
K+ V N + + S V +VEV + SV+AV P+ S
Sbjct: 179 KERKIEQTSASEENIAETNTAATVKNLNDKTKDMPSEVLASVEVPDDDHSVSAVKLPQ-S 237
Query: 209 EANLVSDGVDNERKKMRGQKASITAKVSEDVLDNNRIRSVDSSRLPTSGKACNIQ----- 263
+ + S G M+ ++D LD + S SG I
Sbjct: 238 SSQVASLGSRKTESNMKPTTPVENGSYTKD-LDEALVCRFQPSPPKISGSGSLINKESLI 296
Query: 264 DATVNENFSKTSAGXXXXXXXXXXXXXP--------------ELNHSNKQASGTDNLKSS 309
D+ +++ S+TS P E+ HS +A+G+DN+ S
Sbjct: 297 DSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRTALHVEVGHSKTKAAGSDNIGVS 356
Query: 310 RGLPSVSTVGTISSIHG-------SEKEA-------AMPNNRSL---------VKNIPRQ 346
+ +PSV TV +S + G S K A + P+ +S+ +K I RQ
Sbjct: 357 KMVPSVLTVDKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSISTANSLATSLKKIVRQ 416
Query: 347 QAAAKVVRHYPSEMTLFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAFTRPL 406
Q A KVVRHYPSE T FPYE F+KLY +KVEL+PFGL NLGNSCYANAVLQCL FTRPL
Sbjct: 417 QTAPKVVRHYPSEPTHFPYELFIKLY--EKVELQPFGLHNLGNSCYANAVLQCLMFTRPL 474
Query: 407 TAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCEFEKLILEGRRGKSHLSPTGILSHL 466
T+YL GLHS+NC SKKEWCFMCEFEKL+ EGR+GK LSPTGILSHL
Sbjct: 475 TSYLLGGLHSKNC-------------SKKEWCFMCEFEKLVGEGRQGKIALSPTGILSHL 521
Query: 467 RDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEETTLVQLIFGGYLRSK 526
DIGSSFGPG++EDAHEFLRYAID MQS MKEA+K+G + L EETTL+QLIFGGYLRSK
Sbjct: 522 PDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLMQLIFGGYLRSK 581
Query: 527 IKCTMCQGSSEQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERA 586
I+CT C +SEQ ERILDLTVEIDGDI++LE AL RFTSTE+LDGDN+Y CSRCKS+ERA
Sbjct: 582 IRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLDGDNKYKCSRCKSHERA 641
Query: 587 KKKLTISEAPNILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMS-TADDISPVYQLYAV 645
KKKLTISEAPN+LTIALKRYQSG FGKINKA+RF E LNL YMS ADD SPVY LYAV
Sbjct: 642 KKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQRYMSPKADDTSPVYSLYAV 701
Query: 646 VVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPRAP 705
VVHHD+MNAAFSGHYVCYVKDT GKW+K DDSQVKPVSLE V+SKCAYML YARCSPRAP
Sbjct: 702 VVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYMLLYARCSPRAP 761
Query: 706 NSVRKMILAQDSSCTKKAKQMVDPGPPSLEGGSYLSRHQGGQSCRDHIVYDLTYTFGGSS 765
+SVR ++AQD + KK K V+ G GG + HQGGQ DH+ DL +T+
Sbjct: 762 SSVRPALMAQDPARVKKDKARVNSG--RWHGGGPI--HQGGQMYADHMTDDLPHTYDEFG 817
Query: 766 YTVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEYDYIFGSSDQMYPVSTV 825
+ + IFG + S
Sbjct: 818 HGPYSPAESPSPSESSSIFTSSDTGSHSTDSSESTRNSTSEDMERLIFGDQVSYFDGSMF 877
Query: 826 VIPEEHELSYSRQRSSLNPSTSSQYVDQAAEVEMLHQHQHQAGRGGWDEGDVMPFFYSNQ 885
E ++YSR +SSL S+S Q VDQ E H+ Q R GW++GD Y+NQ
Sbjct: 878 GHGENGRMTYSRSKSSLGTSSSGQEVDQYRPDE----HRLQGAREGWNQGDESSSLYTNQ 933
Query: 886 ER 887
+
Sbjct: 934 SK 935
>Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 944
Score = 348 bits (893), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/357 (48%), Positives = 239/357 (66%), Gaps = 15/357 (4%)
Query: 362 LFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNL 421
+FPY+ F+KL N+ ++ P GL+N GNSC+AN VLQCL+ TRPL AYL HSR C
Sbjct: 59 IFPYDEFLKLCNWRDLDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSREC-- 116
Query: 422 ILSQNCVTYHGSKKEWCFMCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDA 481
+ ++WCF+CE + I +P ILSHL +IG + G GR+EDA
Sbjct: 117 ---------YKRHEDWCFLCELQCHIQRASESMHPFAPKNILSHLPNIGGNLGFGRQEDA 167
Query: 482 HEFLRYAIDTMQSASMKE-AKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCE 540
HEF+R+AID MQSA + E + V +ETTL+Q IFGG L+S+++CT C S + E
Sbjct: 168 HEFMRFAIDKMQSACLDEFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYE 227
Query: 541 RILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILT 600
++DLTVEI GD ++LEE L +FT+ E LDGDN+Y C C Y +A+K+LT+ +APNILT
Sbjct: 228 NMMDLTVEIHGDADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILT 287
Query: 601 IALKRYQSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHY 660
I LKR+QSG FGK+NK V F L+L+ YMS+ D S Y LYAVVVH D++NA+F GHY
Sbjct: 288 ITLKRFQSGRFGKLNKRVTFPMKLDLTPYMSSTDG-SDQYDLYAVVVHLDMLNASFFGHY 346
Query: 661 VCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYAR--CSPRAPNSVRKMILAQ 715
+CY+K+ +G+W+K+DD +V V E+V ++ AYML Y+R PR +V +++ Q
Sbjct: 347 ICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLYSRRTARPRPLIAVEELMKQQ 403
>Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 975
Score = 347 bits (891), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/345 (49%), Positives = 229/345 (66%), Gaps = 14/345 (4%)
Query: 362 LFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNL 421
LFPYE VK + ++ + P GL N GNSCYANAVLQCL T+PL YL LHS++C
Sbjct: 421 LFPYEDLVKFFQYEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDC-- 478
Query: 422 ILSQNCVTYHGSKKEWCFMCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDA 481
K WC MCE E+ R +SP+ ILS+LR+IG G G +EDA
Sbjct: 479 -----------CSKNWCLMCELEQYASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDA 527
Query: 482 HEFLRYAIDTMQSASMKE-AKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCE 540
HEFLR+ + +MQ A + + V +ETTL+Q +FGG L+SK+KC C SE+ E
Sbjct: 528 HEFLRHLVMSMQGACLDGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYE 587
Query: 541 RILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILT 600
I+DLT+EI G + +L++AL +FT+ E LDG+N Y C RC +Y +A+K+L++ E PNILT
Sbjct: 588 NIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILT 647
Query: 601 IALKRYQSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHY 660
+ LKR+Q+G +GKINK V F + L++ +++ A D P+Y LYAVVVH D NA+FSGHY
Sbjct: 648 VVLKRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHY 707
Query: 661 VCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPRAP 705
+ YVKD QG W ++DDS+V+ VSL +V+S+ AYMLFY R PR P
Sbjct: 708 ISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYMRSFPRPP 752
>Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 644
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 184/330 (55%), Gaps = 29/330 (8%)
Query: 384 LVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCEF 443
L NLGN+CY N+VLQCLA T PL + HS C +L +K + C C
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLP--------NKDKECVFCVV 76
Query: 444 EKLILEGRRGKSHL--SPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAK 501
E+ I R ++ SP I+ L F GR+EDAHEFLRY ID +A ++ K
Sbjct: 77 ERQISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRK 136
Query: 502 K------NGVYGLPEETTLVQ-------LIFGGYLRSKIKCTMCQGSSEQCERILDLTVE 548
+ NG G EE VQ FGG L S++KC C+G S + + I+D++++
Sbjct: 137 RLPASNANGDAG--EEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLD 194
Query: 549 IDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQS 608
+ G N++ +AL RF EIL+G N+Y+C RCK A+K+L + AP +L I LKR++
Sbjct: 195 LPGS-NSVADALARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEG 253
Query: 609 GNFGKINKAVRFTEYLNLSNYMSTAD-DISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDT 667
N GKIN+ + F E L LS++M + D PVY L+ +VH + SGHY YVKD
Sbjct: 254 INGGKINRNIEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGF--SPDSGHYYAYVKDA 311
Query: 668 QGKWHKMDDSQVKPVSLEKVLSKCAYMLFY 697
G+W+ +DS + P S + VLS+ Y+LFY
Sbjct: 312 IGRWYCCNDSHISPSSSQDVLSEKVYILFY 341
>Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 899
Score = 216 bits (549), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 177/326 (54%), Gaps = 32/326 (9%)
Query: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCE 442
GL NLGN+CY N+VLQCL +T P AYL G H +C +C +C
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTA-------------GFCALCA 106
Query: 443 FEKLILEGRRGKSHL-SPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAK 501
+ + + + +P+ I+ +LR I SF R+EDAHE + +++M +
Sbjct: 107 LQNHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPS-- 164
Query: 502 KNGVYGLPEET------TLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINT 555
G+P E+ +LV IFGG LRS++KCT C S + + LDL+++I G +
Sbjct: 165 -----GVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI-GKATS 218
Query: 556 LEEALHRFTSTEILDG-DNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGN-FGK 613
L AL FT+ E+LDG + +Y C RC+ AKKK TI +AP +LTI LKR+ N K
Sbjct: 219 LVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREK 278
Query: 614 INKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHK 673
I+K V F L+L ++S + Y LY V+VH SGHY C+V+ + G WH
Sbjct: 279 IDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQ--SGHYYCFVRTSSGMWHN 336
Query: 674 MDDSQVKPVSLEKVLSKCAYMLFYAR 699
+DD+QV+ V VL + AYMLFY R
Sbjct: 337 LDDNQVRQVREADVLRQKAYMLFYVR 362
>Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1185
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 176/320 (55%), Gaps = 20/320 (6%)
Query: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCE 442
GL N GN+CY N+VLQCL +T P AYL G H +C I +C +C
Sbjct: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTI-------------GFCALCA 133
Query: 443 FEKLILEGRRGKSH-LSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAK 501
++ + + L P I+ +LR I SF R+EDAHE + +++M +
Sbjct: 134 LQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLPSGV 193
Query: 502 KNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALH 561
+G E +LV IFGG LRS+++CT C S + + LDL++EI + TL +AL
Sbjct: 194 PSGSPSA-YEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI-ANAATLVKALQ 251
Query: 562 RFTSTEILD-GDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGN-FGKINKAVR 619
FT+ E+LD G+ +YNC C+ AKK+ I +AP++LTI LKR+ N KI+K V+
Sbjct: 252 HFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQ 311
Query: 620 FTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQV 679
F LNL Y+S + + Y LY V+VH SGHY C+V+ + G WH +DD++V
Sbjct: 312 FQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQ--SGHYYCFVRTSSGIWHNLDDNKV 369
Query: 680 KPVSLEKVLSKCAYMLFYAR 699
V VL + AYMLFY R
Sbjct: 370 YQVREADVLRQKAYMLFYVR 389
>Os04g0647300 Similar to Ubiquitin-specific protease 22
Length = 591
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 59/369 (15%)
Query: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRN-CNLILSQNCVTYHGSKKEWCFMC 441
GL NLGN+C+ N+VLQ L PL Y H+R C + + K C C
Sbjct: 212 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 271
Query: 442 EFEKLILEGRRG-KSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEA 500
+ +++ G ++ SP L S+ ++DAHEF +D + ++K+
Sbjct: 272 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHE-NIKDD 330
Query: 501 KKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDIN------ 554
+ + + + +F G LRS + CT C +S E +D+++++D N
Sbjct: 331 QHKSLAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVA 390
Query: 555 ---------------------TLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTIS 593
TL L RFT E LD + ++ C RCK + + K+++I
Sbjct: 391 NPKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIR 450
Query: 594 EAPNILTIALKRYQSGNFGKINKAV----RFTEYLNLSNYMST----------------- 632
P + +KR++ + K+++ V +F L+++ Y+S+
Sbjct: 451 RLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEAS 510
Query: 633 -ADDISPV---YQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVL 688
AD +S ++++AV++H + A GHYV Y++ W+K DD+ V V V
Sbjct: 511 DADSVSEFSSEFEIFAVIMHSGKLEA---GHYVTYLR-LNNHWYKCDDAWVTRVEEHTVR 566
Query: 689 SKCAYMLFY 697
+ AYMLFY
Sbjct: 567 TSQAYMLFY 575
>Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 4) (AtUBP4)
Length = 367
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 44/329 (13%)
Query: 380 RPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCF 439
R FGL N GN+CY N+VLQ L F P L E + +N +T C
Sbjct: 23 RYFGLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKTPGDAEENLLT--------CL 74
Query: 440 MCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRY------------ 487
F + + + ++ ++P + ++ F +DAHEFL +
Sbjct: 75 ADLFMQ-VSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKE 133
Query: 488 ---AIDTMQSASMKEAKK-------NGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSE 537
A D+ QS+S ++ NGV P TLV F G L ++ +C C+ +
Sbjct: 134 SNAAKDSPQSSSPEKVPNGPVQPLANGVRKEPP-VTLVHKNFQGILTNETRCLRCETVTA 192
Query: 538 QCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPN 597
+ E DL+V+I+ + +++ L F STE L+ ++++ C +C S + A+K++ I +AP+
Sbjct: 193 RDETFFDLSVDIEQN-SSITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPH 251
Query: 598 ILTIALKRY----QSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMN 653
IL I LKR+ Q G + K++ V F L L ST+DD+ Y L+AVVVH V +
Sbjct: 252 ILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKL----STSDDVDTEYSLFAVVVH--VGS 305
Query: 654 AAFSGHYVCYVKDTQGKWHKMDDSQVKPV 682
GHYV VK + W DD V+ V
Sbjct: 306 GPNHGHYVSLVK-SHNHWLFFDDENVEMV 333
>Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 3) (AtUBP3)
Length = 366
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 155/326 (47%), Gaps = 41/326 (12%)
Query: 380 RPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCF 439
R FGL N GN+CY N+VLQ L F P L E + + N +T C
Sbjct: 21 RYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNMLT--------CL 72
Query: 440 MCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKE 499
F + I ++ ++P + L+ F +DAHEFL + ++ + KE
Sbjct: 73 ADLFSQ-ISNQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILEKE 131
Query: 500 AK--------------KNG-----VYGLPEET--TLVQLIFGGYLRSKIKCTMCQGSSEQ 538
+K NG + G +E TLV F G L ++ +C C+ +++
Sbjct: 132 SKVVAEPCENSSLKKNSNGPINVQLNGTKKEPVPTLVHKCFQGILTNETRCLRCETVTDR 191
Query: 539 CERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNI 598
E DL+++I+ + +++ L F+STE L+ ++++ C +C S + A+K++ I + PNI
Sbjct: 192 DETFFDLSLDIEQN-SSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNI 250
Query: 599 LTIALKRY----QSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNA 654
L I LKR+ Q G + K++ V F L L N T D+ Y L+AV+VH V +
Sbjct: 251 LVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLIN---TVDNSDLEYSLFAVLVH--VGSG 305
Query: 655 AFSGHYVCYVKDTQGKWHKMDDSQVK 680
GHY+ VK + W DD V+
Sbjct: 306 PNHGHYISLVK-SHNHWLFFDDENVE 330
>Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 415
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 163/363 (44%), Gaps = 55/363 (15%)
Query: 380 RPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCF 439
R FGL N GN+CY N+VLQ L P L E + N +T C
Sbjct: 70 RYFGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKNTEDSEDNLLT--------CL 121
Query: 440 MCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKE 499
F ++ L +R L+P + +R F +DAHEF + ++ + ++
Sbjct: 122 ADLFSQITLAKKRTGV-LAPKRFVQRVRKQNELFRSYMHQDAHEFWNFLVNDIIDILEED 180
Query: 500 AK--KNGVYGLPEET------------------TLVQLIFGGYLRSKIKCTMCQGSSEQC 539
+ + PEE TLV F G L ++ KC MC + +
Sbjct: 181 CRTANSSPETTPEEVSNGAANALANGARERPLVTLVHRTFQGILTNETKCLMCDTITAKD 240
Query: 540 ERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNIL 599
E DL+++++ + ++L L F STEIL+G++++ C +C S + A K++ I +AP++L
Sbjct: 241 ETFFDLSIDVEQN-SSLTSCLKSFFSTEILNGEDKFFCDKCSSLQEAHKRMKIKKAPHVL 299
Query: 600 TIALKRY----QSGNFGKINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAA 655
I LKR+ Q K++ V + L L S ++D Y L+AVVVH V ++
Sbjct: 300 VIHLKRFKYVEQLSRHKKLSYRVVYPLELKLG---SMSEDADCEYSLFAVVVH--VGSSP 354
Query: 656 FSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVL--------------SKCAYMLFYARCS 701
GHYV +K + G W DD V+ +S E L + Y+LFY R
Sbjct: 355 NHGHYVSQIK-SHGNWLSFDDDTVQ-ISEESTLQTFYGSSREHCGGNTDHGYILFYERLG 412
Query: 702 PRA 704
++
Sbjct: 413 GKS 415
>Os07g0661300 Similar to Ubiquitin-specific protease 24
Length = 489
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 173/420 (41%), Gaps = 77/420 (18%)
Query: 336 NRSLVKNIPRQQAAAKVVRHYPSEMTLFPYEHFVKLYN---FDKVELRPFGLVNLGNSCY 392
N SLV I A + T P + V N F L P GL N GN C+
Sbjct: 92 NSSLVPEITENGGPA-----IDTPTTAAPVDELVTSLNKKDFRNKPLLPHGLKNTGNICF 146
Query: 393 ANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCEFEKL----IL 448
N+ LQ L P L + RN N+ + Y F+ +F+ L +
Sbjct: 147 LNSSLQALLSCWPFVQLLQ---NLRNQNIPKA----GYPTLNAFIEFISQFDVLDDSNVK 199
Query: 449 EGRRGKSHLSPTGILSHLRDIGSSFGPG---------REEDAHEFLRYAIDTMQSASMK- 498
+ + + S + I S + +F P R+EDA EFL +A+D M +K
Sbjct: 200 KDEKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDELVKL 259
Query: 499 -----------------------EAKKNGVYGL------PEETTLVQLIFGGYLRSKIKC 529
KKN + P E T IFGG L+S +K
Sbjct: 260 NGNGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTA---IFGGQLQSCVKA 316
Query: 530 TMCQGS-SEQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKS-YERAK 587
T + S + Q R++ L + D + L++AL F + E L+G Y + K+ A+
Sbjct: 317 TGNKASVTVQPFRLIHLDIFPDA-VQKLDDALRLFAAPESLEG---YRTAAGKAGLVTAR 372
Query: 588 KKLTISEAPNILTIALKRYQSGNFG--KINKAVRFTEYLNLSNYM----STADDISPVYQ 641
K + I I+ + LKR+ G+ G K+ K + F L LS + S+ S Y+
Sbjct: 373 KSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQSRRYE 432
Query: 642 LYAVVVHHDVMNAAFS-GHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARC 700
L A + H + A S GHY K G+W + DD V PVSL KVL AY+LFY +
Sbjct: 433 LVATITH---LGANPSRGHYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVLFYKQL 489
>Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)
(Ubiquitin thiolesterase 12) (Ubiquitin-specific
processing protease 12) (Deubiquitinating enzyme 12)
Length = 931
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 560 LHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGNFGKINKAVR 619
L F E L D+ + C RC +++A KKL + P IL + LKR+ F K NK
Sbjct: 766 LDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMK-NKLDT 824
Query: 620 FTEY----LNLSNYMS-TADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDT-QGKWHK 673
F + L++S Y + + D P+Y+LYAV+ H+ GHY Y K + W+
Sbjct: 825 FVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHY---GGMGGGHYSAYAKLVEEDSWYH 881
Query: 674 MDDSQVKPVSLEKVLSKCAYMLFYAR 699
DDS V V E + + AY+LFY R
Sbjct: 882 FDDSHVSSVGEEDIRTSSAYLLFYRR 907
>Os03g0192800 Similar to Ubiquitin-specific protease 26
Length = 311
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 47/237 (19%)
Query: 381 PFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLI--------LSQNCVTYHG 432
P GL NLG +CYAN++LQCL + G+ S +++ L++ H
Sbjct: 105 PAGLTNLGATCYANSILQCLY----MNTSFRLGIFSLEPDILKMHPVLDQLARLFAQLHS 160
Query: 433 SKKEWCFMCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTM 492
SK + F K + G ++D+HEFL + +
Sbjct: 161 SKMAFIDSAPFIKTL------------------------ELDNGVQQDSHEFLTLFLSLL 196
Query: 493 QSASMKEAKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILD---LTVEI 549
+ S+ +K +P T+VQ +F G + +C+ C SE ++ D L + I
Sbjct: 197 E-GSLSHSK------VPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNI 249
Query: 550 DGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRY 606
G +N LE++L + STE LDG+N+Y C C+ A + + + P ++ LKRY
Sbjct: 250 KG-LNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRY 305
>Os12g0621000 Similar to Ubiquitin-specific protease 8 (Fragment)
Length = 864
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 555 TLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGNF--G 612
+L L F E L ++ + C CK + +A KKL + P IL I LKR+ +
Sbjct: 696 SLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTKN 755
Query: 613 KINKAVRFTEY-LNLSNYM-STADDISPVYQLYAVVVHHDVMNAAFSGHYVCYV-KDTQG 669
K+ V F + L+LS Y+ S IS Y+LYA+ H+ M GHY YV + +
Sbjct: 756 KLETCVDFPVHDLDLSKYIGSRGQQISNHYRLYAISNHYGSMGG---GHYTAYVYHEGKK 812
Query: 670 KWHKMDDSQVKPVSLEKVLSKCAYMLFYAR 699
W+ DD V P+S E + + AY+LFY R
Sbjct: 813 GWYDFDDRHVGPISEESIKTSAAYVLFYRR 842
>Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 911
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 543 LDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIA 602
L+L + + D L L F E L ++ + C CK +++A KKL + P +L I
Sbjct: 726 LELIPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIH 785
Query: 603 LKRYQSGNFGKINKAVRFTEY----LNLSNYMSTADDISPV-YQLYAVVVHHDVMNAAFS 657
LKR+ F + NK F ++ L+LS+Y+ ++S Y+LYA+ H+ M
Sbjct: 786 LKRFSYTQFTR-NKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGG--- 841
Query: 658 GHYVCYVKDTQGK-WHKMDDSQVKPVSLEKVLSKCAY 693
GHY + +GK W+K DD V+P++ + + + AY
Sbjct: 842 GHYTASIYHEEGKGWYKFDDECVRPITEDSIKTPAAY 878
>Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein
Length = 1055
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 581 KSYERAKKKLTISEAPNILTIALKRYQS---GNFGKINKAVRFTEYLNLSNYMS--TADD 635
K + A +++ IS+AP +LTI L R+ G F K+ V F E L++ +M + ++
Sbjct: 921 KVFRSAMRRILISKAPPVLTINLNRFSQDSHGRFKKLKGHVHFKETLDVRPFMDPRSKEN 980
Query: 636 ISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQ-----------GKWHKMDDSQVKPVSL 684
+ Y+L VV H M A GHYV YV+ + W D+QV+ SL
Sbjct: 981 DNTTYRLVGVVEHLGTMAA---GHYVAYVRTGKIGGRQQRSTGSKSWFYASDAQVREASL 1037
Query: 685 EKVLSKCAYMLFYAR 699
E+VL+ AY+LFY R
Sbjct: 1038 EEVLNCEAYILFYER 1052
>Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 500
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 518 IFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGD----INTLEEALHRFTSTEILDGDN 573
+FGG R C+ C S E L I TLE+ L + D +
Sbjct: 1 MFGGKFRRSKVCSKCGMLSNSEEDFTLLMFNIPHREQVVAATLEDCLDHIVEENVHDSLS 60
Query: 574 RYNCSRCKSYERAKKKLTISEAPNILTIALKRYQS---GNFGKINKAVRFTEYLNLSNYM 630
R C C + +++ K T E +++ I L+R++ G + KI + + F L++S YM
Sbjct: 61 R--CESCMNDQKSTSKCTFHETRDVV-IVLQRFEPLTLGGYRKIGELINFPTELDISPYM 117
Query: 631 STADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSK 690
S +Y+L+ ++VH GHY YVK W+++ D VK V+ VL
Sbjct: 118 SGVVTDKHIYELFGIIVHE---GGVIGGHYRSYVK--TNCWYEVSDRDVKRVNENFVLGA 172
Query: 691 CAYMLFYAR 699
AY+LFY R
Sbjct: 173 QAYILFYNR 181
>Os12g0489100 Similar to Ubiquitin-specific protease 12
Length = 551
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 131/324 (40%), Gaps = 52/324 (16%)
Query: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCE 442
GL N G +CY N++LQ L Y + + YH E
Sbjct: 208 GLKNQGATCYMNSLLQTLYHI----PYFRKAV---------------YHMPTTENDMPSG 248
Query: 443 FEKLILEGRRGKSHLSPTGILSHLRDIGSSFG-----PGREEDAHEFLRYAIDTMQSASM 497
L L+ K S + + +++ SFG + D E R + ++ M
Sbjct: 249 SIPLALQSLFYKLQYSDNSVAT--KELTKSFGWDTYDSFMQHDVQELNRVLCEKLED-KM 305
Query: 498 KEAKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLE 557
KE G ++ +F G+ + I+C S + E DL +++ G + +
Sbjct: 306 KETVVEGT---------IEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKG-CSDVY 355
Query: 558 EALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKR----YQSGNFGK 613
+ ++ E L+GDN+Y+ + + AKK + + P +L + LKR Y K
Sbjct: 356 ASFDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVK 414
Query: 614 INKAVRFTEYLNLS----NYMSTADD--ISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDT 667
IN F L+L Y++ D I +Y L++V+VH GHY +++ T
Sbjct: 415 INDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYTLHSVLVHS---GGVHGGHYYAFIRPT 471
Query: 668 -QGKWHKMDDSQVKPVSLEKVLSK 690
+W+K DD +V +K L +
Sbjct: 472 LSDQWYKFDDERVTKEDTKKALEE 495
>Os08g0528000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 787
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 472 SFGPGREEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEETTLVQLIFGGYLRSKIKCTM 531
+F P RE+DA Q A + +KNG PE +T ++ +
Sbjct: 567 TFSPLREDDA-----------QVALGIDVEKNGSAVRPEVSTEAKVTTSSAKVTAKDKGK 615
Query: 532 CQGSSEQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLT 591
+ S+ C + D+ + ++EE L E ++ C C + + K
Sbjct: 616 TRSSNIICNKAQDIN-----SLASIEECLELHFEAETVE----LTCENCSKFAQKLNKSV 666
Query: 592 I----SEAPNILTIALKR--YQSGNFGKINKAVRFTEYLNLSNYM--STADDISPVYQLY 643
I S P +L I LKR QS K+ V F E L++ +M S+ D + +Y+L
Sbjct: 667 IQTRLSLLPPVLVIHLKRSLLQSD---KVKGHVSFKEILDVGLFMDPSSVDKDNSIYRLA 723
Query: 644 AVVVHHDVMNAAFSGHYVCYVKDTQ-------GKWHKMDDSQVKPVSLEKVLSKCAYMLF 696
+V+ HH + SGH+V YV+ ++ W D+ ++ V LE+VL AY+LF
Sbjct: 724 SVIEHHG--HGKDSGHFVAYVRQSRPQQTNGSSSWFWASDTDIREVPLEEVLKCEAYLLF 781
Query: 697 YAR 699
Y R
Sbjct: 782 YER 784
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.131 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 26,972,918
Number of extensions: 1076580
Number of successful extensions: 2767
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 2729
Number of HSP's successfully gapped: 21
Length of query: 918
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 808
Effective length of database: 11,292,261
Effective search space: 9124146888
Effective search space used: 9124146888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)