Os07g0661300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-specific protease 24.
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Os07g0661300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-specific protease 24.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.3 | 0.291 | 10.1 | 1.75 | 0.632 | -0.313 | 0.216 | 2.16 | 0.0679 | 14.4 | 0.9 | 1381 | -- | -- |
| 44.09 | 0.312 | 10.1 | 1.85 | 0.612 | 0.104 | 0.164 | -- | 0.0223 | 14.2 | 0.9 | 1381 | -- | -- |
| 38.47 | 0.289 | 10.1 | 1.75 | 0.632 | -0.308 | -- | 2.16 | 0.0684 | 14.4 | 0.9144 | 1381 | -- | -- |
| 44.18 | 0.312 | 10.1 | 1.86 | 0.61 | 0.111 | -- | -- | 0.0231 | 14.1 | 0.9 | 1381 | -- | -- |
| 62.09 | 0.367 | 10.1 | 1.73 | -- | -0.309 | -- | 2.27 | 0.0667 | -- | 1 | 1381 | -- | -- |
| 44.36 | 0.312 | 10.1 | 1.84 | 0.636 | -- | 0.194 | -- | 0.0226 | 14.3 | -- | -- | -- | -- |
| 44.5 | 0.312 | 10.1 | 1.85 | 0.635 | -- | -- | -- | 0.0236 | 14.2 | -- | -- | -- | -- |
| 60.65 | 0.364 | 10.1 | 1.91 | -- | 0.311 | -- | -- | 0.0208 | -- | 3.8 | 3928 | -- | -- |
| 67.12 | 0.382 | 10.2 | -- | 0.528 | -1.52 | -- | -- | -0.529 | 15.2 | 7.421 | 47520 | -- | -- |
| 68.59 | 0.387 | 10.1 | 1.82 | -- | -- | -- | -- | 0.00834 | -- | -- | -- | -- | -- |
| 134.55 | 0.543 | 10.1 | -- | 0.6 | -- | -- | -- | -0.182 | 14.1 | -- | -- | -- | -- |
| 88.26 | 0.438 | 10.2 | -- | -- | -1.33 | -- | -- | -0.485 | -- | 7.5 | 47520 | -- | -- |
| 156.13 | 0.583 | 10.1 | -- | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 9 |
| 3 | 37.44 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 15 |
| 6 | 37.46 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 9 | 37.55 | temperature | 30.0 | 90 | < th | dose independent | sin | 4 | NA |
| 10 | 37.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 16 | 37.62 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 11 |
| 18 | 37.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 22 | 37.70 | wind | 1.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 37 | 37.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 56 | 37.91 | wind | 1.0 | 1440 | < th | dose independent | rect. | 23 | 13 |
| 67 | 37.95 | wind | 1.0 | 1440 | < th | dose independent | rect. | 23 | 11 |
| 69 | 37.95 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 78 | 38.00 | wind | 1.0 | 1440 | > th | dose independent | sin | 6 | NA |
| 88 | 38.03 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 89 | 38.05 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 108 | 38.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 109 | 38.09 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 111 | 38.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 126 | 38.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 147 | 38.16 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 149 | 38.17 | wind | 1.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 152 | 38.17 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 173 | 38.21 | wind | 1.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 174 | 38.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 177 | 38.21 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 181 | 38.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 201 | 38.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 217 | 38.25 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 229 | 38.28 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 240 | 38.29 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 244 | 38.29 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 256 | 38.31 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 259 | 38.31 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 265 | 38.32 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 285 | 38.32 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 312 | 38.33 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 316 | 38.33 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 317 | 38.33 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 327 | 38.35 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 337 | 38.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 341 | 38.36 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 347 | 38.37 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 355 | 38.37 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 366 | 38.39 | humidity | 90.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 377 | 38.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 382 | 38.40 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 383 | 38.40 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 386 | 38.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 394 | 38.41 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 399 | 38.41 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 3 | 13 |
| 403 | 38.42 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 409 | 38.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 7 |
| 436 | 38.44 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 470 | 38.47 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 480 | 38.48 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 487 | 38.49 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 492 | 38.50 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 518 | 38.52 | wind | 1.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 522 | 38.52 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 529 | 38.52 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 560 | 38.54 | temperature | 25.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 586 | 38.56 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 610 | 38.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 616 | 38.57 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 19 |
| 639 | 38.59 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 646 | 38.59 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 666 | 38.60 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 695 | 38.62 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 697 | 38.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 717 | 38.62 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 721 | 38.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 729 | 38.63 | wind | 1.0 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 731 | 38.63 | humidity | 90.0 | 720 | > th | dose dependent | no | NA | NA |
| 799 | 38.66 | humidity | 80.0 | 720 | > th | dose dependent | sin | 3 | NA |
| 842 | 38.68 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 859 | 38.68 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 911 | 38.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 963 | 38.74 | wind | 1.0 | 1440 | > th | dose independent | no | NA | NA |
| 989 | 38.75 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 19 |