Os08g0528000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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Os08g0528000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.08 | 0.216 | 3.16 | 0.16 | 0.114 | 0.224 | 0.00252 | 0.998 | -0.0555 | 7.97 | 91 | 5911 | -- | -- |
| 22.37 | 0.22 | 3.15 | 0.0941 | 0.144 | 0.276 | -0.00728 | -- | -0.0875 | 7.56 | 96 | 4826 | -- | -- |
| 21.08 | 0.214 | 3.16 | 0.16 | 0.114 | 0.224 | -- | 0.998 | -0.0555 | 7.96 | 91 | 5912 | -- | -- |
| 22.37 | 0.22 | 3.15 | 0.0856 | 0.113 | 0.28 | -- | -- | -0.0778 | 7.6 | 92.31 | 4345 | -- | -- |
| 21.79 | 0.217 | 3.16 | 0.161 | -- | 0.225 | -- | 0.989 | -0.0542 | -- | 90.62 | 5876 | -- | -- |
| 23.34 | 0.226 | 3.14 | 0.0753 | 0.112 | -- | -0.00938 | -- | -0.0252 | 7.9 | -- | -- | -- | -- |
| 23.34 | 0.226 | 3.14 | 0.0751 | 0.112 | -- | -- | -- | -0.0251 | 7.92 | -- | -- | -- | -- |
| 23.04 | 0.224 | 3.16 | 0.0865 | -- | 0.282 | -- | -- | -0.0777 | -- | 91 | 4327 | -- | -- |
| 22.54 | 0.221 | 3.15 | -- | 0.111 | 0.273 | -- | -- | -0.0806 | 7.82 | 88 | 4306 | -- | -- |
| 24.02 | 0.229 | 3.14 | 0.0763 | -- | -- | -- | -- | -0.0236 | -- | -- | -- | -- | -- |
| 23.48 | 0.227 | 3.14 | -- | 0.113 | -- | -- | -- | -0.0335 | 7.88 | -- | -- | -- | -- |
| 23.22 | 0.224 | 3.16 | -- | -- | 0.275 | -- | -- | -0.0787 | -- | 88 | 4321 | -- | -- |
| 24.17 | 0.229 | 3.15 | -- | -- | -- | -- | -- | -0.0321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.84 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 5 | 20.91 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 6 | 20.92 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 11 |
| 11 | 20.95 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 25 | 20.98 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 28 | 20.99 | humidity | 70 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 64 | 21.24 | humidity | 70 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 65 | 21.25 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 84 | 21.26 | humidity | 50 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 85 | 21.27 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 86 | 21.27 | humidity | 80 | 14400 | < th | dose dependent | sin | 8 | NA |
| 92 | 21.28 | humidity | 60 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 95 | 21.28 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 96 | 21.28 | humidity | 80 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 103 | 21.28 | humidity | 50 | 4320 | > th | dose dependent | rect. | 2 | 13 |
| 123 | 21.29 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 21 |
| 151 | 21.30 | humidity | 50 | 4320 | > th | dose dependent | sin | 5 | NA |
| 152 | 21.30 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 162 | 21.30 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 167 | 21.31 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 168 | 21.31 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 183 | 21.31 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 197 | 21.32 | humidity | 70 | 4320 | > th | dose independent | sin | 2 | NA |
| 285 | 21.34 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 371 | 21.35 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 13 |
| 406 | 21.36 | humidity | 90 | 4320 | < th | dose dependent | sin | 5 | NA |
| 424 | 21.37 | humidity | 70 | 4320 | < th | dose independent | sin | 1 | NA |
| 441 | 21.37 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 497 | 21.38 | humidity | 80 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 544 | 21.39 | humidity | 90 | 4320 | < th | dose dependent | rect. | 10 | 6 |
| 615 | 21.40 | humidity | 70 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 643 | 21.41 | humidity | 70 | 4320 | > th | dose independent | no | NA | NA |
| 745 | 21.42 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 766 | 21.42 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 767 | 21.42 | humidity | 70 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 857 | 21.44 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 972 | 21.46 | humidity | 70 | 4320 | < th | dose independent | no | NA | NA |