Os02g0795000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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Os02g0795000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.84 | 0.239 | 10.1 | 0.662 | 0.782 | -0.611 | -1.01 | -0.86 | 0.292 | 17.1 | 26.09 | 195 | -- | -- |
| 26.65 | 0.24 | 10.1 | 0.526 | 0.768 | -0.562 | -0.77 | -- | 0.27 | 17.3 | 27.39 | 124 | -- | -- |
| 28.04 | 0.247 | 10.1 | 0.609 | 0.783 | -0.56 | -- | -0.453 | 0.291 | 17.2 | 26.2 | 132 | -- | -- |
| 28.06 | 0.247 | 10.1 | 0.513 | 0.767 | -0.569 | -- | -- | 0.254 | 17.3 | 27.1 | 130 | -- | -- |
| 49.33 | 0.327 | 10.1 | 0.405 | -- | -1.32 | -- | -0.178 | 0.194 | -- | 120.2 | 244 | -- | -- |
| 31.27 | 0.262 | 10.1 | 0.663 | 0.902 | -- | -0.74 | -- | 0.381 | 16.9 | -- | -- | -- | -- |
| 32.68 | 0.268 | 10.1 | 0.661 | 0.897 | -- | -- | -- | 0.377 | 17 | -- | -- | -- | -- |
| 49.2 | 0.327 | 10.1 | 0.353 | -- | -1.23 | -- | -- | 0.157 | -- | 31.97 | 240 | -- | -- |
| 34.4 | 0.273 | 10.1 | -- | 0.704 | -0.791 | -- | -- | 0.16 | 17.4 | 26.94 | 191 | -- | -- |
| 75.06 | 0.405 | 10.1 | 0.628 | -- | -- | -- | -- | 0.354 | -- | -- | -- | -- | -- |
| 44.19 | 0.311 | 10.1 | -- | 0.886 | -- | -- | -- | 0.303 | 17 | -- | -- | -- | -- |
| 52.23 | 0.337 | 10.1 | -- | -- | -1.33 | -- | -- | 0.0925 | -- | 31.22 | 242 | -- | -- |
| 85.47 | 0.432 | 10.1 | -- | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 3 | 24.38 | temperature | 20 | 90 | > th | dose dependent | sin | 9 | NA |
| 8 | 24.69 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 4 |
| 10 | 24.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 21 | 24.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 22 | 25.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 31 | 25.07 | temperature | 15 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 35 | 25.12 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 12 |
| 43 | 25.17 | temperature | 15 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 55 | 25.21 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 58 | 25.22 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 63 | 25.24 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 66 | 25.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 70 | 25.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 96 | 25.38 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 118 | 25.44 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 123 | 25.45 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 137 | 25.48 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 141 | 25.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 144 | 25.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 13 |
| 149 | 25.50 | temperature | 20 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 160 | 25.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 161 | 25.51 | temperature | 20 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 178 | 25.54 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 182 | 25.56 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 186 | 25.56 | temperature | 20 | 43200 | < th | dose dependent | rect. | 7 | 16 |
| 190 | 25.57 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 192 | 25.57 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 196 | 25.58 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 208 | 25.58 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 209 | 25.58 | temperature | 20 | 43200 | < th | dose dependent | rect. | 16 | 7 |
| 237 | 25.60 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 242 | 25.61 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 280 | 25.63 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 284 | 25.63 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 311 | 25.65 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 312 | 25.65 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 321 | 25.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 322 | 25.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 14 |
| 332 | 25.66 | temperature | 20 | 43200 | < th | dose dependent | sin | 20 | NA |
| 339 | 25.67 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 362 | 25.68 | radiation | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 388 | 25.69 | temperature | 20 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 432 | 25.72 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 470 | 25.74 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 471 | 25.74 | radiation | 10 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 494 | 25.75 | temperature | 20 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 495 | 25.75 | temperature | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 516 | 25.76 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 525 | 25.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 537 | 25.77 | temperature | 15 | 43200 | > th | dose independent | sin | 7 | NA |
| 539 | 25.77 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 542 | 25.77 | radiation | 30 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 557 | 25.78 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 558 | 25.78 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 570 | 25.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 581 | 25.79 | temperature | 20 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 585 | 25.79 | radiation | 30 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 589 | 25.79 | temperature | 20 | 1440 | > th | dose dependent | sin | 7 | NA |
| 614 | 25.80 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 630 | 25.80 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 640 | 25.81 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 685 | 25.83 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 705 | 25.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 711 | 25.84 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 717 | 25.84 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 751 | 25.85 | temperature | 20 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 752 | 25.85 | temperature | 20 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 762 | 25.85 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 790 | 25.86 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 16 |
| 812 | 25.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 10 | 22 |
| 827 | 25.87 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 13 |
| 878 | 25.88 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 884 | 25.88 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 888 | 25.88 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 914 | 25.89 | radiation | 40 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 919 | 25.89 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 953 | 25.90 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 961 | 25.90 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 13 |
| 986 | 25.91 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 987 | 25.91 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 2 |