BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0795000 Os02g0795000|AK120097
(1185 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 2377 0.0
Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 627 e-179
Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 228 2e-59
Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hyd... 223 6e-58
Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 215 2e-55
Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 208 2e-53
Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 202 1e-51
Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 139 1e-32
Os04g0647300 Similar to Ubiquitin-specific protease 22 137 3e-32
Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrola... 135 2e-31
Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrola... 133 7e-31
Os07g0661300 Similar to Ubiquitin-specific protease 24 94 5e-19
Os02g0693400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 87 7e-17
Os12g0489100 Similar to Ubiquitin-specific protease 12 84 5e-16
Os03g0192800 Similar to Ubiquitin-specific protease 26 81 6e-15
Os11g0619500 81 6e-15
Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 80 8e-15
Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 72 3e-12
Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hyd... 70 1e-11
Os08g0527600 Peptidase C19, ubiquitin carboxyl-terminal hyd... 70 1e-11
>Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein
Length = 1185
Score = 2377 bits (6161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1145/1185 (96%), Positives = 1145/1185 (96%)
Query: 1 MMGEAEEGLMHRRIEFHAARRPPRAVEGAGGRFWVEILSPXXXXXXXXXXXRSEGLVRXX 60
MMGEAEEGLMHRRIEFHAARRPPRAVEGAGGRFWVEILSP RSEGLVR
Sbjct: 1 MMGEAEEGLMHRRIEFHAARRPPRAVEGAGGRFWVEILSPDADKAAVVAAARSEGLVRGL 60
Query: 61 XXXXXXXXXIDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHM 120
IDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHM
Sbjct: 61 EKGEGSGGGIDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHM 120
Query: 121 SSCRTIGFCALCALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSL 180
SSCRTIGFCALCALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSL
Sbjct: 121 SSCRTIGFCALCALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSL 180
Query: 181 LESMHKCCLPSGVPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI 240
LESMHKCCLPSGVPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI
Sbjct: 181 LESMHKCCLPSGVPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI 240
Query: 241 ANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPF 300
ANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPF
Sbjct: 241 ANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPF 300
Query: 301 NPRHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGI 360
NPRHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGI
Sbjct: 301 NPRHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGI 360
Query: 361 WHNLDDNKVYQVREADVLRQKAYMLFYVRDRTRSSVMYSDNCTVNLSVNKMISEKITCMN 420
WHNLDDNKVYQVREADVLRQKAYMLFYVRDRTRSSVMYSDNCTVNLSVNKMISEKITCMN
Sbjct: 361 WHNLDDNKVYQVREADVLRQKAYMLFYVRDRTRSSVMYSDNCTVNLSVNKMISEKITCMN 420
Query: 421 GSIKKDTVETKTLRVPSLVKEDVNLKKQNSENGQSSNISNAPQDQCSKSHSNTEVLEAAA 480
GSIKKDTVETKTLRVPSLVKEDVNLKKQNSENGQSSNISNAPQDQCSKSHSNTEVLEAAA
Sbjct: 421 GSIKKDTVETKTLRVPSLVKEDVNLKKQNSENGQSSNISNAPQDQCSKSHSNTEVLEAAA 480
Query: 481 SPNNDPASTQKASCIRPDTAAVNLPMKTEQTAPDNRREITSPAQADVSVLHNASFNQKLY 540
SPNNDPASTQKASCIRPDTAAVNLPMKTEQTAPDNRREITSPAQADVSVLHNASFNQKLY
Sbjct: 481 SPNNDPASTQKASCIRPDTAAVNLPMKTEQTAPDNRREITSPAQADVSVLHNASFNQKLY 540
Query: 541 EKQLQEHQLETDDALTDSRKDAPAALCTYGVGDGLLGRNGQSSEPHIGPCPAALPIHNGG 600
EKQLQEHQLETDDALTDSRKDAPAALCTYGVGDGLLGRNGQSSEPHIGPCPAALPIHNGG
Sbjct: 541 EKQLQEHQLETDDALTDSRKDAPAALCTYGVGDGLLGRNGQSSEPHIGPCPAALPIHNGG 600
Query: 601 EGLLGANGQASEAHSGPCSSAFPIHNGGEGLLGASGQSSEPHTGPCPAALPIHDGGQGLL 660
EGLLGANGQASEAHSGPCSSAFPIHNGGEGLLGASGQSSEPHTGPCPAALPIHDGGQGLL
Sbjct: 601 EGLLGANGQASEAHSGPCSSAFPIHNGGEGLLGASGQSSEPHTGPCPAALPIHDGGQGLL 660
Query: 661 GPNGQASEPHTDSCPAAFPIHSGGEGLLGANGQASELHTDPCPAAFPIHSGGEGLLGANG 720
GPNGQASEPHTDSCPAAFPIHSGGEGLLGANGQASELHTDPCPAAFPIHSGGEGLLGANG
Sbjct: 661 GPNGQASEPHTDSCPAAFPIHSGGEGLLGANGQASELHTDPCPAAFPIHSGGEGLLGANG 720
Query: 721 QASEPHTDPCPAAFPIHSAGEGLLGANGQDSEHRTGPIPAAFPVWNGTGVILEKYGQVSG 780
QASEPHTDPCPAAFPIHSAGEGLLGANGQDSEHRTGPIPAAFPVWNGTGVILEKYGQVSG
Sbjct: 721 QASEPHTDPCPAAFPIHSAGEGLLGANGQDSEHRTGPIPAAFPVWNGTGVILEKYGQVSG 780
Query: 781 PADPFCKPTPTISDTVSIAQIIPTEHAAVSNGTVSSSDDLTGNTEANESSEFVKNYGEQV 840
PADPFCKPTPTISDTVSIAQIIPTEHAAVSNGTVSSSDDLTGNTEANESSEFVKNYGEQV
Sbjct: 781 PADPFCKPTPTISDTVSIAQIIPTEHAAVSNGTVSSSDDLTGNTEANESSEFVKNYGEQV 840
Query: 841 MVRDLSAETSGDRANADEQTSMQNNTLEVGKDVAKDTDNVANAEEQVLNHPLAEQVKSEK 900
MVRDLSAETSGDRANADEQTSMQNNTLEVGKDVAKDTDNVANAEEQVLNHPLAEQVKSEK
Sbjct: 841 MVRDLSAETSGDRANADEQTSMQNNTLEVGKDVAKDTDNVANAEEQVLNHPLAEQVKSEK 900
Query: 901 QIYPGISTTLICSEDTTQLIDKDTGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASV 960
QIYPGISTTLICSEDTTQLIDKDTGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASV
Sbjct: 901 QIYPGISTTLICSEDTTQLIDKDTGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASV 960
Query: 961 XXXXXXXXXXXXXXXXXXVHIESIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDG 1020
VHIESIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDG
Sbjct: 961 KLHKKRKHKRSKKHHALSVHIESIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDG 1020
Query: 1021 TQLFNKKQHIEGTTNSVPMDNNDTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVN 1080
TQLFNKKQHIEGTTNSVPMDNNDTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVN
Sbjct: 1021 TQLFNKKQHIEGTTNSVPMDNNDTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVN 1080
Query: 1081 ANERGPWHFNLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGK 1140
ANERGPWHFNLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGK
Sbjct: 1081 ANERGPWHFNLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGK 1140
Query: 1141 RKKIRKPKHGFSGPNPFQETANIRSRQRMRLQSDQTKSGNQPLRI 1185
RKKIRKPKHGFSGPNPFQETANIRSRQRMRLQSDQTKSGNQPLRI
Sbjct: 1141 RKKIRKPKHGFSGPNPFQETANIRSRQRMRLQSDQTKSGNQPLRI 1185
>Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 899
Score = 627 bits (1617), Expect = e-179, Method: Compositional matrix adjust.
Identities = 329/549 (59%), Positives = 386/549 (70%), Gaps = 50/549 (9%)
Query: 70 IDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFC 129
+DPEL VAR+YL RIGAGLQN GNTCYLNSVLQCLTYTEPF AYLQSG+H SSCRT GFC
Sbjct: 43 LDPELSVARIYLGRIGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFC 102
Query: 130 ALCALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCL 189
ALCALQ HV +ALQSTGKI+ P IV+NLRCISRSFR SRQEDAHELMV+LLESMHKCCL
Sbjct: 103 ALCALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL 162
Query: 190 PSGVPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKA 249
PSGVPS SPSAYEKSLVH+IFGG LRSQV+CT CSHCSNKFDPFLDLSL+I A +LV+A
Sbjct: 163 PSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRA 222
Query: 250 LQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKK 309
LQ+FTAEELLDGGEKQY C+ CR+KVVAKK+F I+KAP VLTIHLKRFSPFNPR KIDKK
Sbjct: 223 LQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKK 282
Query: 310 VQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNKV 369
V FQP L+LKP++S+ +G +FKYSLYGVLVHAGWNTQSGHYYCFVRTSSG+WHNLDDN+V
Sbjct: 283 VDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQV 342
Query: 370 YQVREADVLRQKAYMLFYVRDRTRSSVMYSDNCTVNLSVNKMISEKITCMNGSIKKDTVE 429
QVREADVLRQKAYMLFYVRDR + DN T N+ + I EKI+ ++ I+ +E
Sbjct: 343 RQVREADVLRQKAYMLFYVRDRVGNPTPRKDNITANMPARRTIPEKISGLSDMIQSGVIE 402
Query: 430 TKTLRVPSLVKEDVNLKKQNSENGQSS--------NISNAPQDQCSKSH---SNTEVLEA 478
K NG SS ISN + S+ H + +
Sbjct: 403 AKL-------------------NGSSSPYGDKRLHGISNGNSIKTSREHYLKKDGKTEAP 443
Query: 479 AASPNNDPASTQKASCIRPDTAAVNLPMKTEQTAPDNRREITSPAQADVSVLHNASFNQK 538
AS NN ASTQKAS P L +++Q RE++S ++ + L + NQ
Sbjct: 444 KASENNGLASTQKASA--PQIDGATLSAQSKQITSTGHREVSSSDRS--ASLTHVIVNQA 499
Query: 539 LYEKQLQEHQLETDDALTDSRKDAPAALCTYGVGDGLLG-RNGQSSEPHIGPCPAALPIH 597
+ QE Q + D LTD+ + G G+ +L RN Q+S+ P ++P
Sbjct: 500 VAMVPSQELQPKV-DGLTDT--------SSLGNGNAILSERNKQTSQHQ---NPFSMPAS 547
Query: 598 NG---GEGL 603
+G G GL
Sbjct: 548 HGKDTGAGL 556
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 203/421 (48%), Gaps = 61/421 (14%)
Query: 766 NGTGVILEKYGQVSGPADPFCKPTPTISDTVS--IAQIIPTEHAAVSNGTVSSSDDLTGN 823
NG ++ E+ Q S +PF P DT + AQ PT+ A VSNG V SS D
Sbjct: 523 NGNAILSERNKQTSQHQNPFSMPASHGKDTGAGLAAQTFPTKDAIVSNGVVPSSRDPI-- 580
Query: 824 TEANESSEFVKNYGEQVMVRDLSAETSGDRANADEQTSMQNNTLEVGKDVAKDTDNVANA 883
SSE V G Q ++ D++T K++ +N+ +
Sbjct: 581 -----SSEKV--CGLQKSIKQ------------DDKTV---------KELPISENNIVSG 612
Query: 884 EEQVLNHPLAEQVKSEKQIYPGISTTLICSEDTTQLIDKDTGSGKLNKKMNCKSKRQVKY 943
E+V + KQ SE + ++ D+ + K+++ KSK+ V+Y
Sbjct: 613 ---------LERVNARKQT---------SSEVSMKVAAADSCNSNTPKRVDLKSKKLVRY 654
Query: 944 PAVRMFFGPKQLLLASVXXXXXXXXXXXXXXXXXXVHIESI------ITDQQTSTSETVF 997
P + M+ GP+Q++L S+ + + ++QQ STS T
Sbjct: 655 PVMNMWLGPRQVMLGSLKVQKKKKCNRTRRRSVVCEDMANATCSGNNTSEQQASTSTTTS 714
Query: 998 SKIISHKSRGQKRSCASASSEDGTQLFNKKQHIEGTTNSVPMDNNDTKLASADSNDAKLA 1057
S+ + RG+KR+ S S ++ Q NK+ I T S ++ + + S + A
Sbjct: 715 SETVQCTPRGRKRAYDSDSPKNNNQKQNKQDVIGADTGSGELNMDKRNVISETA-----A 769
Query: 1058 SAELPSSCTNSLVNQTDSRNNVNANERGPWHFNLLTRGLREITVPRWDDTEIKNTKETEI 1117
SAELP S NQ SRNNV+A P HF +LTR L E+TVP WDD + N + E
Sbjct: 770 SAELPKLGPGSSANQEHSRNNVHAKLGVPRHFTVLTRDLAEVTVPCWDDVAVSNAEARES 829
Query: 1118 LHPRTRSIGYVLDEWDEEYDRGKRKKIRKPKHGFSGPNPFQETANIRSRQRMRLQSDQTK 1177
H ++SIGYVLDEWDEEYDRGK KKIR K + GPNPFQE AN S++ M+ ++ Q K
Sbjct: 830 KHSESKSIGYVLDEWDEEYDRGKTKKIRNSKEDYGGPNPFQEEANYISQRNMKQRTYQPK 889
Query: 1178 S 1178
S
Sbjct: 890 S 890
>Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 944
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 181/320 (56%), Gaps = 11/320 (3%)
Query: 81 LRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSC--RTIGFCALCALQRHV 138
L + GL N GN+C+ N VLQCL+ T P AYL +H C R +C LC LQ H+
Sbjct: 74 LDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHI 133
Query: 139 NSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLP--SGVPSG 196
A +S P +I+ +L I + RQEDAHE M ++ M CL G +
Sbjct: 134 QRASESM-HPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAV 192
Query: 197 SPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI-ANAATLVKALQHFTA 255
PS E +L+ IFGG L+SQV+CT C SN+++ +DL++EI +A +L + L FTA
Sbjct: 193 DPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTA 252
Query: 256 EELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQFQPT 315
E LDG K Y C+ C V A+KR + +AP++LTI LKRF K++K+V F
Sbjct: 253 VEWLDGDNK-YKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQS-GRFGKLNKRVTFPMK 310
Query: 316 LNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQS--GHYYCFVRTSSGIWHNLDDNKVYQVR 373
L+L PY+S+ +G + +Y LY V+VH S GHY C+++ G W+ +DD KV V
Sbjct: 311 LDLTPYMSSTDGSD-QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVD 369
Query: 374 EADVLRQKAYMLFYVRDRTR 393
E +V Q AYML Y R R
Sbjct: 370 EEEVHAQGAYMLLYSRRTAR 389
>Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 978
Score = 223 bits (568), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 180/309 (58%), Gaps = 10/309 (3%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSALQSTG 146
GL N GN+CY N+VLQCL +T P +YL G H +C +C +C ++ V Q G
Sbjct: 451 GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQ--G 508
Query: 147 KI-LRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLPSGVPSGSPSAYEK-S 204
KI L P I+ +L I SF +QEDAHE + +++M C+ SG+ +E+ +
Sbjct: 509 KIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETT 568
Query: 205 LVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI-ANAATLVKALQHFTAEELLDGGE 263
L+ IFGG LRS++RCT C S + + LDL++EI + ++L AL+ FT+ E+LDG
Sbjct: 569 LMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLDGDN 628
Query: 264 KQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQFQPTLNLKPYVS 323
K Y C C+ AKK+ I +AP+VLTI LKR+ KI+K ++F TLNL+ Y+S
Sbjct: 629 K-YKCSRCKSHERAKKKLTISEAPNVLTIALKRYQS-GKFGKINKAIRFPETLNLQRYMS 686
Query: 324 -NPEGMEFKYSLYGVLVHAGWNTQ--SGHYYCFVRTSSGIWHNLDDNKVYQVREADVLRQ 380
+ YSLY V+VH SGHY C+V+ + G W+ DD++V V +V+ +
Sbjct: 687 PKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSK 746
Query: 381 KAYMLFYVR 389
AYML Y R
Sbjct: 747 CAYMLLYAR 755
>Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 918
Score = 215 bits (547), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 176/320 (55%), Gaps = 20/320 (6%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTI-------------GFCALCA 133
GL N GN+CY N+VLQCL +T P AYL G H +C I +C +C
Sbjct: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCE 442
Query: 134 LQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLPSGV 193
++ + + L P I+ +LR I SF R+EDAHE + +++M +
Sbjct: 443 FEKLILEGRRGKSH-LSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAK 501
Query: 194 PSGSPSA-YEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI-ANAATLVKALQ 251
+G E +LV IFGG LRS+++CT C S + + LDL++EI + TL +AL
Sbjct: 502 KNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALH 561
Query: 252 HFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQ 311
FT+ E+LD G+ +YNC C+ AKK+ I +AP++LTI LKR+ N KI+K V+
Sbjct: 562 RFTSTEILD-GDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGN-FGKINKAVR 619
Query: 312 FQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQ--SGHYYCFVRTSSGIWHNLDDNKV 369
F LNL Y+S + + Y LY V+VH SGHY C+V+ + G WH +DD++V
Sbjct: 620 FTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQV 679
Query: 370 YQVREADVLRQKAYMLFYVR 389
V VL + AYMLFY R
Sbjct: 680 KPVSLEKVLSKCAYMLFYAR 699
>Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 644
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 176/320 (55%), Gaps = 21/320 (6%)
Query: 88 LQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTI-----GFCALCALQRHVNSAL 142
L+N GNTCYLNSVLQCL T P + S H + C+ + C C ++R ++ L
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPNKDKECVFCVVERQISRLL 84
Query: 143 QS-TGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCL------PSGVPS 195
++ G + P I+R L + FR RQEDAHE + ++++ H L P+ +
Sbjct: 85 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 144
Query: 196 GSPSAYE------KSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKA 249
G E ++ FGG L SQV+C TC SNK D +D+SL++ + ++ A
Sbjct: 145 GDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADA 204
Query: 250 LQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKK 309
L F E+L+G K Y+CE C++ A+K+ + +AP VL I LKRF N KI++
Sbjct: 205 LARFFQPEILEGSNK-YSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGING-GKINRN 262
Query: 310 VQFQPTLNLKPYVSNPEGMEFK-YSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNK 368
++F+ TL L ++ N Y+L+G +VH+G++ SGHYY +V+ + G W+ +D+
Sbjct: 263 IEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSH 322
Query: 369 VYQVREADVLRQKAYMLFYV 388
+ DVL +K Y+LFY+
Sbjct: 323 ISPSSSQDVLSEKVYILFYI 342
>Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 975
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 171/317 (53%), Gaps = 8/317 (2%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSALQSTG 146
GL N GN+CY N+VLQCL T+P + YL H C + +C +C L+++ S L+ +G
Sbjct: 442 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYA-STLRESG 500
Query: 147 KILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLP--SGVPSGSPSAYEKS 204
+ P I+ NLR I QEDAHE + L+ SM CL G S E +
Sbjct: 501 GPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQVEASLQETT 560
Query: 205 LVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIAN-AATLVKALQHFTAEELLDGGE 263
L+ ++FGG L+S+V+C C H S +++ +DL+LEI +L AL FTA E LD GE
Sbjct: 561 LIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLD-GE 619
Query: 264 KQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQFQPTLNLKPYVS 323
Y C C V A+K+ + + P++LT+ LKRF KI+K V F L++ P+V+
Sbjct: 620 NMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQT-GKYGKINKCVTFPDMLDMVPFVT 678
Query: 324 NPEGMEFKYSLYGVLVHAGWNTQ--SGHYYCFVRTSSGIWHNLDDNKVYQVREADVLRQK 381
Y LY V+VH SGHY +V+ G W +DD++V V V+ +
Sbjct: 679 GAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEG 738
Query: 382 AYMLFYVRDRTRSSVMY 398
AYMLFY+R R +Y
Sbjct: 739 AYMLFYMRSFPRPPKIY 755
>Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 415
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 161/347 (46%), Gaps = 53/347 (15%)
Query: 87 GLQNFGNTCYLNSVLQ----CLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSAL 142
GL+NFGNTCY NSVLQ C+ + E + Y + ++ L L + A
Sbjct: 73 GLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKNTEDSEDNLLTCLADLFSQITLAK 132
Query: 143 QSTGKILRPVHIVRNLRCISRSFRISRQEDAHEL-------MVSLLESMHKCCLPSGVPS 195
+ TG +L P V+ +R + FR +DAHE ++ +LE C + P
Sbjct: 133 KRTG-VLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFLVNDIIDILEE--DCRTANSSPE 189
Query: 196 GSPSAYEK----------------SLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLE 239
+P +LVHR F G+L ++ +C C + K + F DLS++
Sbjct: 190 TTPEEVSNGAANALANGARERPLVTLVHRTFQGILTNETKCLMCDTITAKDETFFDLSID 249
Query: 240 IANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSP 299
+ ++L L+ F + E+L+ GE ++ C+ C A KR I+KAP VL IHLKRF
Sbjct: 250 VEQNSSLTSCLKSFFSTEILN-GEDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFKY 308
Query: 300 FN--PRH-KIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRT 356
RH K+ +V + L L S E + +YSL+ V+VH G + GHY ++
Sbjct: 309 VEQLSRHKKLSYRVVYPLELKLG---SMSEDADCEYSLFAVVVHVGSSPNHGHYVSQIK- 364
Query: 357 SSGIWHNLDDNKVYQVREADVLR--------------QKAYMLFYVR 389
S G W + DD+ V Q+ E L+ Y+LFY R
Sbjct: 365 SHGNWLSFDDDTV-QISEESTLQTFYGSSREHCGGNTDHGYILFYER 410
>Os04g0647300 Similar to Ubiquitin-specific protease 22
Length = 591
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 69/368 (18%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEH--------------MSSCRTIGFCALC 132
GL N GNTC++NSVLQ L + P Y H + C C
Sbjct: 212 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 271
Query: 133 ALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLPSG 192
L ++A P + + + + Q+DAHE +S+L+ +H+
Sbjct: 272 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQ 331
Query: 193 VPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLE----------IAN 242
S + + + HR+F G+LRS V CT C S F+P +D+SL+ +AN
Sbjct: 332 HKSLAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVAN 391
Query: 243 ------------------AATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIE 284
+TL++ L+ FT E LD E+++ CE C+++ + K+ I
Sbjct: 392 PKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLD-AEQKFFCERCKERQESLKQMSIR 450
Query: 285 KAPSVLTIHLKRFSPFNPR---HKIDKKVQFQPTLNLKPYVSNP---------------- 325
+ P V H+KRF + + K+D +QF +L++ PY+S+
Sbjct: 451 RLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEAS 510
Query: 326 ---EGMEF--KYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNKVYQVREADVLRQ 380
EF ++ ++ V++H+G ++GHY ++R ++ W+ DD V +V E V
Sbjct: 511 DADSVSEFSSEFEIFAVIMHSG-KLEAGHYVTYLRLNNH-WYKCDDAWVTRVEEHTVRTS 568
Query: 381 KAYMLFYV 388
+AYMLFYV
Sbjct: 569 QAYMLFYV 576
>Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 4) (AtUBP4)
Length = 367
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 34/319 (10%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIG------FCALCALQRHVNS 140
GL+NFGNTCY NSVLQ L + PF L E+ ++ +T G L L V+
Sbjct: 26 GLENFGNTCYCNSVLQALYFCIPFREKLL--EYYANNKTPGDAEENLLTCLADLFMQVSQ 83
Query: 141 ALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMH--------------K 186
+ + TG ++ P V+ ++ + FR +DAHE + LL + +
Sbjct: 84 SKKKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESNAAKDSPQ 142
Query: 187 CCLPSGVPSGSPSAYEK--------SLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSL 238
P VP+G +LVH+ F G+L ++ RC C + + + F DLS+
Sbjct: 143 SSSPEKVPNGPVQPLANGVRKEPPVTLVHKNFQGILTNETRCLRCETVTARDETFFDLSV 202
Query: 239 EIANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFS 298
+I +++ L++F + E L+ E ++ C+ C A+KR I+KAP +L IHLKRF
Sbjct: 203 DIEQNSSITSCLKNFCSTETLN-AEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFK 261
Query: 299 PFNPRHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSS 358
+ KK+ ++ ++ +S + ++ +YSL+ V+VH G GHY V+ S
Sbjct: 262 YIEQLGRY-KKLSYRVVFPMELKLSTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVK-SH 319
Query: 359 GIWHNLDDNKVYQVREADV 377
W DD V V E+ +
Sbjct: 320 NHWLFFDDENVEMVEESTL 338
>Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 3) (AtUBP3)
Length = 366
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 155/322 (48%), Gaps = 39/322 (12%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIG------FCALCALQRHVNS 140
GL+NFGNTCY NSVLQ L + PF Q E+ ++ ++ G L L +++
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFRE--QLLEYYANNKSTGDVEDNMLTCLADLFSQISN 81
Query: 141 ALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELM-------VSLLESMHKC----CL 189
+ TG ++ P ++ L+ + FR +DAHE + V +LE K C
Sbjct: 82 QKKKTG-VIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILEKESKVVAEPCE 140
Query: 190 PSGVP-----------SGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSL 238
S + +G+ +LVH+ F G+L ++ RC C +++ + F DLSL
Sbjct: 141 NSSLKKNSNGPINVQLNGTKKEPVPTLVHKCFQGILTNETRCLRCETVTDRDETFFDLSL 200
Query: 239 EIANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFS 298
+I +++ L++F++ E L+ E ++ C+ C A+KR I+K P++L IHLKRF
Sbjct: 201 DIEQNSSITSCLKNFSSTETLN-AEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFK 259
Query: 299 ---PFNPRHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVR 355
K+ +V F L L V N + +YSL+ VLVH G GHY V+
Sbjct: 260 YIEQLGRYKKLSYRVVFPLELKLINTVDNS---DLEYSLFAVLVHVGSGPNHGHYISLVK 316
Query: 356 TSSGIWHNLDDNKVYQVREADV 377
S W DD V E+ V
Sbjct: 317 -SHNHWLFFDDENVEMTDESMV 337
>Os07g0661300 Similar to Ubiquitin-specific protease 24
Length = 489
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 152/358 (42%), Gaps = 65/358 (18%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHV-------N 139
GL+N GN C+LNS LQ L PFV LQ+ + + + G+ L A + +
Sbjct: 137 GLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQNIPKA-GYPTLNAFIEFISQFDVLDD 195
Query: 140 SALQSTGK---ILRPVHIVRNLRCISRSFRIS---------RQEDAHELMVSLLESMHKC 187
S ++ K I I + R+F RQEDA E + ++ MH
Sbjct: 196 SNVKKDEKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDE 255
Query: 188 CLPSG-----------VPSGSPSAYE------KSLVHR-----------IFGGLLRSQVR 219
+ V S A+E KS + R IFGG L+S V+
Sbjct: 256 LVKLNGNGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCVK 315
Query: 220 CTTCSHCSNKFDPFLDLSLEIANAAT--LVKALQHFTAEELLDGGEKQYNCEHCRQKVV- 276
T + S PF + L+I A L AL+ F A E L+G Y + +V
Sbjct: 316 AT-GNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESLEG----YRTAAGKAGLVT 370
Query: 277 AKKRFMIEKAPSVLTIHLKRFSPFNPRH---KIDKKVQFQPTLNL-KPYVSNP--EGMEF 330
A+K I ++ +HLKRFS H K+ K + F L L + +S+P E M+
Sbjct: 371 ARKSVKIHSLSKIMILHLKRFS--YGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQS 428
Query: 331 K-YSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNKVYQVREADVLRQKAYMLFY 387
+ Y L + H G N GHY +++SG W DD+ V V VL +AY+LFY
Sbjct: 429 RRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVLFY 486
>Os02g0693400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 257
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Query: 84 IGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCR--TIGFCALCALQRHVNSA 141
+G+GL N GNTC+LNS+LQC+T+T P L+S +H + C GFC+ CAL+ H++ +
Sbjct: 169 VGSGLGNMGNTCFLNSILQCVTHTVPLFLRLRSTDHCAPCSYDKDGFCSFCALKEHIDES 228
Query: 142 LQSTGKILRPVHIVRNLRCI--SRSF 165
++ +G ++RPV NLR I SR F
Sbjct: 229 IRRSGSVIRPVRFRDNLRSILCSRFF 254
>Os12g0489100 Similar to Ubiquitin-specific protease 12
Length = 551
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 149/361 (41%), Gaps = 66/361 (18%)
Query: 86 AGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSALQST 145
GL+N G TCY+NS+LQ L Y P+ + ++ HM + L ALQS
Sbjct: 207 VGLKNQGATCYMNSLLQTL-YHIPY--FRKAVYHMPTTENDMPSGSIPL------ALQSL 257
Query: 146 GKILRPVHIVRNLRCISRSFRIS-----RQEDAHELMVSLLESMHKCCLPSGVPSGSPSA 200
L+ + +++SF Q D EL L E + + V G+
Sbjct: 258 FYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDK-MKETVVEGT--- 313
Query: 201 YEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEELLD 260
+ ++F G + + C + SN+ + F DL L++ + + + + E L+
Sbjct: 314 -----IEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCSDVYASFDKYVEVERLE 368
Query: 261 GGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRH---KIDKKVQFQPTLN 317
G K + ++ Q AKK + P VL + LKRF R KI+ + +F L+
Sbjct: 369 GDNKYHAEQYGLQD--AKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLD 426
Query: 318 LK----PYVSNPEGMEFK--YSLYGVLVHAGWNTQSGHYYCFVR-TSSGIWHNLDDNKVY 370
L Y++ + Y+L+ VLVH+G GHYY F+R T S W+ DD +V
Sbjct: 427 LDRDDGKYLAPDADRSIRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQWYKFDDERVT 485
Query: 371 QVREADVLRQK--------------------------AYMLFYVRDRTRSSVMYSDNCTV 404
+ L ++ AYML Y+R+ + +M C V
Sbjct: 486 KEDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKDKIM----CNV 541
Query: 405 N 405
+
Sbjct: 542 D 542
>Os03g0192800 Similar to Ubiquitin-specific protease 26
Length = 311
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 86 AGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSALQST 145
AGL N G TCY NS+LQCL +M++ +G +L ++ L
Sbjct: 106 AGLTNLGATCYANSILQCL--------------YMNTSFRLGIFSLEPDILKMHPVLDQL 151
Query: 146 GKILRPVHIVRNLRCISRSFRISR------QEDAHELMVSLLESMHKCCLPSGVPSGSPS 199
++ +H + S F + Q+D+HE + L + S VP
Sbjct: 152 ARLFAQLHSSKMAFIDSAPFIKTLELDNGVQQDSHEFLTLFLSLLEGSLSHSKVPGA--- 208
Query: 200 AYEKSLVHRIFGGLLRSQVRCTTC---SHCSNKFDPFLDLSLEIANAATLVKALQHFTAE 256
+++V +F G + RC++C S S+K + F +L L I L ++L + +
Sbjct: 209 ---RTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLNNLEQSLDDYLST 265
Query: 257 ELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRF 297
E LD GE QY CE C+++V A + + P V+ LKR+
Sbjct: 266 EALD-GENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRY 305
>Os11g0619500
Length = 1402
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 20/159 (12%)
Query: 251 QHFTAEELLDGGEKQYNCEHCRQK------VVAKKRFMIEKAPSVLTIHLKRFSPFNP-- 302
QH LLD +Q + H + K VA ++ I KAP VLTI LKRF +
Sbjct: 1221 QHQGKLPLLDCNARQMDQYHNKPKEGKKIRRVATIKYRINKAPPVLTIQLKRFEFVHDDG 1280
Query: 303 RHKIDKKVQFQPTLNLKPYV-SNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTS---- 357
KI++ V FQ TL++ Y+ + E+KY L V+VH G GHY+ +VR S
Sbjct: 1281 SGKIEEHVIFQETLDITKYMDTRYLDNEYKYCLVAVIVHGGQKLDGGHYFAYVRASRTGG 1340
Query: 358 -------SGIWHNLDDNKVYQVREADVLRQKAYMLFYVR 389
+ W +D KV +V +VL+ +AY+LFY R
Sbjct: 1341 QKRESSDTHSWFLANDEKVEEVLFENVLKCEAYILFYER 1379
>Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 500
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 209 IFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIAN-----AATLVKALQHFTAEELLDGGE 263
+FGG R C+ C SN + F L I + AATL L H E + D
Sbjct: 1 MFGGKFRRSKVCSKCGMLSNSEEDFTLLMFNIPHREQVVAATLEDCLDHIVEENVHDSLS 60
Query: 264 KQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNP--RHKIDKKVQFQPTLNLKPY 321
+ CE C + + + V+ + L+RF P KI + + F L++ PY
Sbjct: 61 R---CESCMNDQKSTSKCTFHETRDVVIV-LQRFEPLTLGGYRKIGELINFPTELDISPY 116
Query: 322 VSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNKVYQVREADVLRQK 381
+S + Y L+G++VH G GHY +V+T+ W+ + D V +V E VL +
Sbjct: 117 MSGVVTDKHIYELFGIIVHEG-GVIGGHYRSYVKTNC--WYEVSDRDVKRVNENFVLGAQ 173
Query: 382 AYMLFYVR 389
AY+LFY R
Sbjct: 174 AYILFYNR 181
>Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 911
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRT--IGFCALCALQ--RHVNSAL 142
GL+N GNTC++NS +QCL +T V Y RT +G AL +
Sbjct: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLW 322
Query: 143 QSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHK-----CCLP------- 190
+ K + P H + C + F Q D+ EL+ LL+ +H+ C P
Sbjct: 323 NTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDA 382
Query: 191 SGVPSGSPS--------AYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIAN 242
SG P + A S++ + G +S + C TCS S FDPF+ LSL + +
Sbjct: 383 SGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPS 442
Query: 243 AATLVKALQHFTAE 256
A + F+ +
Sbjct: 443 TAKRTMTVTVFSTD 456
>Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1055
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSALQSTG 146
GL N GNTC+ N+V+Q L + + + + + + L SA G
Sbjct: 226 GLPNLGNTCFFNAVMQSLLALDRLRSKMLGPDVPTGALLMSLKKLFM----ETSASNDVG 281
Query: 147 KILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMH-KCCLPSGVPSGSPSAYEKSL 205
L P ++ N+ FR + +D+HEL+ L+ +H + + + SA ++
Sbjct: 282 GALSPKNLFSNICSKYPQFRGFQMQDSHELLRCFLDGLHTEENEARKLADEASSATIPTI 341
Query: 206 VHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI 240
V IFGG L S V T C+H S K D FLDLSL +
Sbjct: 342 VDSIFGGQLSSTVSSTECTHSSVKHDQFLDLSLPV 376
>Os08g0527600 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 317
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 219 RCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVV-- 276
RC CS+ K P E A T V +E G KQ N H +V
Sbjct: 124 RCENCSNADQKASPISGKHGEQPVACTNVNGTVDGDQDEQDQGRGKQVNMGHSAHQVEEN 183
Query: 277 ----------AKKRFMIEKAPSVLTIHLKR-FSPFNPRHKIDKKVQFQPTLNLKPYV--S 323
A K + K P VL +HLKR P + K+ V F+ TL++K ++ S
Sbjct: 184 QYDRPDRNKGAIKTCLFSKLPPVLALHLKRNLWPL--KLKVSGHVSFKETLDVKLFMHPS 241
Query: 324 NPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTS-------SGIWHNLDDNKVYQVREAD 376
+ + Y L GV+ H G +GH+ +VR S S +W D + +V +
Sbjct: 242 SEDKDNSSYRLVGVVEHLGLCMDAGHFVAYVRPSCPQQTNGSSLWFCASDADIREVSLEE 301
Query: 377 VLRQKAYMLFYVR 389
VL+ +AY+LFY R
Sbjct: 302 VLKCEAYLLFYER 314
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 41,943,817
Number of extensions: 1981377
Number of successful extensions: 4665
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 4615
Number of HSP's successfully gapped: 22
Length of query: 1185
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1073
Effective length of database: 11,187,833
Effective search space: 12004544809
Effective search space used: 12004544809
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 162 (67.0 bits)