Os07g0160000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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Os07g0160000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.74 | 0.281 | 3.27 | -0.0876 | 0.174 | 0.342 | 0.0638 | 0.77 | -0.0784 | 7.51 | 91 | 4867 | -- | -- |
| 36.46 | 0.281 | 3.26 | -0.141 | 0.172 | 0.339 | 0.029 | -- | -0.0797 | 7.75 | 88 | 5038 | -- | -- |
| 35.75 | 0.278 | 3.27 | -0.086 | 0.174 | 0.341 | -- | 0.766 | -0.0782 | 7.37 | 91 | 4856 | -- | -- |
| 36.44 | 0.281 | 3.26 | -0.151 | 0.174 | 0.38 | -- | -- | -0.0902 | 7.69 | 88 | 5034 | -- | -- |
| 36.55 | 0.282 | 3.27 | -0.0915 | -- | 0.316 | -- | 0.807 | -0.0673 | -- | 89 | 5842 | -- | -- |
| 38.25 | 0.29 | 3.25 | -0.157 | 0.133 | -- | -0.0257 | -- | -0.0182 | 7.5 | -- | -- | -- | -- |
| 38.25 | 0.29 | 3.25 | -0.158 | 0.133 | -- | -- | -- | -0.0181 | 7.59 | -- | -- | -- | -- |
| 37.56 | 0.285 | 3.27 | -0.137 | -- | 0.344 | -- | -- | -0.0847 | -- | 88.8 | 5734 | -- | -- |
| 36.95 | 0.283 | 3.26 | -- | 0.182 | 0.396 | -- | -- | -0.0864 | 7.76 | 91.93 | 5034 | -- | -- |
| 39.2 | 0.293 | 3.25 | -0.156 | -- | -- | -- | -- | -0.016 | -- | -- | -- | -- | -- |
| 38.91 | 0.292 | 3.24 | -- | 0.131 | -- | -- | -- | -5e-04 | 7.67 | -- | -- | -- | -- |
| 38.03 | 0.287 | 3.27 | -- | -- | 0.364 | -- | -- | -0.0782 | -- | 91.27 | 5751 | -- | -- |
| 39.84 | 0.295 | 3.25 | -- | -- | -- | -- | -- | 0.00124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.17 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 3 | 33.70 | wind | 1 | 270 | < th | dose independent | rect. | 22 | 1 |
| 5 | 33.99 | wind | 1 | 30 | < th | dose dependent | rect. | 23 | 4 |
| 6 | 34.04 | wind | 1 | 30 | < th | dose dependent | rect. | 21 | 6 |
| 18 | 34.28 | wind | 1 | 30 | < th | dose dependent | rect. | 13 | 14 |
| 22 | 34.30 | wind | 1 | 30 | < th | dose dependent | rect. | 10 | 17 |
| 32 | 34.74 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 35 | 34.78 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 42 | 34.81 | humidity | 80 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 48 | 34.89 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 51 | 34.95 | wind | 7 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 56 | 35.05 | humidity | 70 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 77 | 35.17 | wind | 7 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 80 | 35.20 | humidity | 70 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 93 | 35.29 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 98 | 35.34 | wind | 7 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 99 | 35.35 | wind | 1 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 126 | 35.44 | wind | 1 | 30 | < th | dose independent | rect. | 23 | 4 |
| 139 | 35.46 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 146 | 35.48 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 156 | 35.51 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 160 | 35.54 | humidity | 90 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 162 | 35.55 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 169 | 35.56 | wind | 7 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 171 | 35.58 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 181 | 35.61 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 182 | 35.62 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 12 |
| 183 | 35.63 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 184 | 35.64 | wind | 7 | 4320 | < th | dose independent | rect. | 21 | 5 |
| 186 | 35.65 | humidity | 80 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 188 | 35.65 | humidity | 50 | 4320 | > th | dose dependent | rect. | 2 | 11 |
| 190 | 35.65 | humidity | 50 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 193 | 35.66 | humidity | 60 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 194 | 35.66 | wind | 7 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 200 | 35.66 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 202 | 35.67 | humidity | 80 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 217 | 35.68 | wind | 1 | 30 | < th | dose independent | rect. | 13 | 14 |
| 234 | 35.69 | wind | 7 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 242 | 35.70 | humidity | 50 | 4320 | > th | dose dependent | sin | 5 | NA |
| 265 | 35.71 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 292 | 35.73 | humidity | 70 | 4320 | > th | dose dependent | rect. | 7 | 6 |
| 301 | 35.73 | humidity | 60 | 14400 | < th | dose dependent | rect. | 19 | 21 |
| 310 | 35.74 | humidity | 90 | 4320 | < th | dose dependent | sin | 4 | NA |
| 420 | 35.77 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 427 | 35.77 | humidity | 60 | 14400 | < th | dose dependent | sin | 3 | NA |
| 454 | 35.78 | humidity | 60 | 14400 | < th | dose dependent | sin | 1 | NA |
| 494 | 35.79 | wind | 7 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 608 | 35.84 | wind | 1 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 661 | 35.84 | wind | 1 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 679 | 35.85 | humidity | 60 | 14400 | < th | dose dependent | no | NA | NA |
| 851 | 35.87 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 889 | 35.88 | humidity | 60 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 912 | 35.89 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 935 | 35.90 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 982 | 35.91 | humidity | 70 | 4320 | > th | dose independent | sin | 4 | NA |
| 984 | 35.91 | wind | 9 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 988 | 35.91 | humidity | 70 | 4320 | > th | dose independent | rect. | 7 | 11 |