BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0160000 Os07g0160000|Os07g0160000
(911 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 1770 0.0
Os12g0621000 Similar to Ubiquitin-specific protease 8 (Frag... 788 0.0
Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrola... 533 e-151
Os12g0536600 102 1e-21
Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hyd... 87 6e-17
Os11g0667400 Similar to Ubiquitin carboxyl-terminal hydrola... 87 8e-17
Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hyd... 86 1e-16
Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 85 2e-16
Os04g0647300 Similar to Ubiquitin-specific protease 22 83 1e-15
Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrola... 76 1e-13
Os08g0527900 Peptidase C19, ubiquitin carboxyl-terminal hyd... 75 3e-13
Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 75 3e-13
Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 74 4e-13
Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 74 4e-13
Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrola... 73 8e-13
Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 72 3e-12
Os11g0473200 Similar to Ubiquitin carboxyl-terminal hydrola... 70 6e-12
>Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 911
Score = 1770 bits (4585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 853/880 (96%), Positives = 853/880 (96%)
Query: 32 VCLVPFRWWARVREEAPPEGGVRXXXXXXXXXXXXXGLRLLHSFLHPDLVLRLEXXXXXX 91
VCLVPFRWWARVREEAPPEGGVR GLRLLHSFLHPDLVLRLE
Sbjct: 32 VCLVPFRWWARVREEAPPEGGVRYAATAAASPSSYYGLRLLHSFLHPDLVLRLERGGCRG 91
Query: 92 XXXXXXXXSYALVPADELSRVLARQNSSLALHNKHSFAEDSAGAYPLVLRISVRETSILT 151
SYALVPADELSRVLARQNSSLALHNKHSFAEDSAGAYPLVLRISVRETSILT
Sbjct: 92 TGAGAGGRSYALVPADELSRVLARQNSSLALHNKHSFAEDSAGAYPLVLRISVRETSILT 151
Query: 152 VKISKKDNPVENYKRAYKIFNIDSQPVHVWDFSGQTNLILMNEWNRSNHDCCHSELENIL 211
VKISKKDNPVENYKRAYKIFNIDSQPVHVWDFSGQTNLILMNEWNRSNHDCCHSELENIL
Sbjct: 152 VKISKKDNPVENYKRAYKIFNIDSQPVHVWDFSGQTNLILMNEWNRSNHDCCHSELENIL 211
Query: 212 EVQVYAMSDSLTSKIGGTSKEYTEQSSADVNDMDVDLSYGSFGRSSSHGLIGLENLGNTC 271
EVQVYAMSDSLTSKIGGTSKEYTEQSSADVNDMDVDLSYGSFGRSSSHGLIGLENLGNTC
Sbjct: 212 EVQVYAMSDSLTSKIGGTSKEYTEQSSADVNDMDVDLSYGSFGRSSSHGLIGLENLGNTC 271
Query: 272 FMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLWNTERKPVSP 331
FMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLWNTERKPVSP
Sbjct: 272 FMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLWNTERKPVSP 331
Query: 332 HHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDKEVA 391
HHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDKEVA
Sbjct: 332 HHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDKEVA 391
Query: 392 DEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSTAKRTMTVT 451
DEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSTAKRTMTVT
Sbjct: 392 DEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSTAKRTMTVT 451
Query: 452 VFSTDGSIEPISYDVTVPQFGSLNDLVQALSSACSLGDDEILLITEVYNNRILRYLEEPS 511
VFSTDGSIEPISYDVTVPQFGSLNDLVQALSSACSLGDDEILLITEVYNNRILRYLEEPS
Sbjct: 452 VFSTDGSIEPISYDVTVPQFGSLNDLVQALSSACSLGDDEILLITEVYNNRILRYLEEPS 511
Query: 512 DSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQYFDERSSIDNITPQMKEFEAPLLAVLPE 571
DSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQYFDERSSIDNITPQMKEFEAPLLAVLPE
Sbjct: 512 DSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQYFDERSSIDNITPQMKEFEAPLLAVLPE 571
Query: 572 RANGLTLKNIYLKLLEPLRFSKSTSSLNDSGRCNSGCAAVMMDATPDSDSKFQSAPSENA 631
RANGLTLKNIYLKLLEPLRFSKSTSSLNDSGRCNSGCAAVMMDATPDSDSKFQSAPSENA
Sbjct: 572 RANGLTLKNIYLKLLEPLRFSKSTSSLNDSGRCNSGCAAVMMDATPDSDSKFQSAPSENA 631
Query: 632 PESSQSETIECQMTEGPSESNIGDTTDSDREAHMEEFEFYLINGRGEFQQTRIQTDEVDL 691
PESSQSETIECQMTEGPSESNIGDTTDSDREAHMEEFEFYLINGRGEFQQTRIQTDEVDL
Sbjct: 632 PESSQSETIECQMTEGPSESNIGDTTDSDREAHMEEFEFYLINGRGEFQQTRIQTDEVDL 691
Query: 692 QTTPNRLLINVHWQQNAVGQYDTSMLKSLPEIHKLELIPKGNEDSVALHGCLEAFLKEEP 751
QTTPNRLLINVHWQQNAVGQYDTSMLKSLPEIHKLELIPKGNEDSVALHGCLEAFLKEEP
Sbjct: 692 QTTPNRLLINVHWQQNAVGQYDTSMLKSLPEIHKLELIPKGNEDSVALHGCLEAFLKEEP 751
Query: 752 LGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFVDFPISDLD 811
LGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFVDFPISDLD
Sbjct: 752 LGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFVDFPISDLD 811
Query: 812 LSSYIIDKSELSDCHYRLYAISNHYGNMGGGHYTASIYHEEGKGWYKFDDECVRPITEDS 871
LSSYIIDKSELSDCHYRLYAISNHYGNMGGGHYTASIYHEEGKGWYKFDDECVRPITEDS
Sbjct: 812 LSSYIIDKSELSDCHYRLYAISNHYGNMGGGHYTASIYHEEGKGWYKFDDECVRPITEDS 871
Query: 872 IKTPAAYDQTRLDGHQSFMCNKVSWTNCVLNDNSIPQVVI 911
IKTPAAYDQTRLDGHQSFMCNKVSWTNCVLNDNSIPQVVI
Sbjct: 872 IKTPAAYDQTRLDGHQSFMCNKVSWTNCVLNDNSIPQVVI 911
>Os12g0621000 Similar to Ubiquitin-specific protease 8 (Fragment)
Length = 864
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/876 (48%), Positives = 539/876 (61%), Gaps = 77/876 (8%)
Query: 32 VCLVPFRWWARVREEAPPEG-GVRXXXXXXXXXXXXXGLRLLHSFLHPDLVLRLEXXXX- 89
V LV RWW +E E GV G+++L F+ D L
Sbjct: 30 VFLVLHRWWREAQEGGGIEAAGVPYAAAPSGPTSYGIGMKVLSMFIS-DQAFTLRRADDL 88
Query: 90 ----XXXXXXXXXXSYALVPADELSRVLARQNSSLALHNKHSFA--EDSAGAYPLVLRIS 143
+YALV AD S+ A S K S + E S YP++LR+S
Sbjct: 89 LQPDASASNAASSRTYALVAADLFSKARAWHIDSGKNAGKKSLSIEEGSVNIYPIMLRVS 148
Query: 144 V-RETSILTVKISKKDNPVENYKRAYKIFNIDSQPVHVWDFSGQTNLILMNEWNRSNHDC 202
V R+T+ LTVKISKKDN EN+KRA KI DS+PVH+WDFSG+T ILMNEWNR D
Sbjct: 149 VTRDTNALTVKISKKDNSAENFKRANKILTSDSEPVHIWDFSGRTTFILMNEWNRMPQDT 208
Query: 203 CHSELENILEVQVYAMSDSLTSKIGGTSKEYT---EQSSADVNDMDVDLSYGSFGRSSSH 259
S+ E LE+ Y +S+ + G E +S ++ + M +DL +
Sbjct: 209 RSSDQEMPLEIHFYDLSEPTANGTNGKKDELALTMSRSMSNGSIMGMDLDSSGSSKQVGT 268
Query: 260 GLIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLR 319
GLIGL+NLGNTCFMNS++QCLAHTSKL GELA +FG+LLR
Sbjct: 269 GLIGLDNLGNTCFMNSAVQCLAHTSKL---------------------GELAYSFGDLLR 307
Query: 320 RLWNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEA 379
+LW +R PV+P FK K+A FAPQFSGFNQHDSQELLAFLLDGLHEDLN+VKCKPY EA
Sbjct: 308 KLWALDRTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYSEA 367
Query: 380 KDASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLP 439
KD+ GRPD+EVADEYW NH+ARNDS+IVD GQYKSTL CP C K SVTFDPFMYLSLP
Sbjct: 368 KDSDGRPDEEVADEYWGNHIARNDSIIVDICQGQYKSTLVCPDCRKVSVTFDPFMYLSLP 427
Query: 440 VPSTAKRTMTVTVFSTDGSIEPISYDVTVPQFGSLNDLVQALSSACSLGDDEILLITEVY 499
+PST RTMT+TVF+TDG+ P Y V+VP+ G L+ ALS ACSL DE LL+ EVY
Sbjct: 428 LPSTTMRTMTITVFNTDGTTGPSPYTVSVPKSGDTKTLIDALSIACSLKGDERLLVAEVY 487
Query: 500 NNRILRYLEEPSDSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQYFDERSSIDNITPQMK 559
N+ ++RYLEEPS+ +SL+RDGD+L A++LP+ E +P+VVF +Q E + K
Sbjct: 488 NSALIRYLEEPSEVISLIRDGDRLVAYKLPKDSEDAPIVVFRNQRM-ESTLTSFGRKSWK 546
Query: 560 EFEAPLLAVLPERANGLTLKNIYLKLLEPLRFSKSTSSLNDSGRCNSGCAAVMMDATPDS 619
F PL++ LP+ NG T+ +Y K++ P R K S SG ++ ++P
Sbjct: 547 SFGTPLVSSLPDTINGSTIFELYQKVMTPFRVPKDDS---------SGADHIIGKSSP-- 595
Query: 620 DSKFQSAPSENAPESSQSETIECQMTEGPSESNIGDTTDSDREAHMEE-FEFYLINGRGE 678
ET + M +ES + D D E E+ +FY IN R
Sbjct: 596 ----------------VEETTDVDMNSDATESTSINNNDCDDETMTEDGMQFYFINERFP 639
Query: 679 FQQTRIQTDE-VDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLPEIHKLELIPKGNEDSV 737
Q+ +I+ D+ + L + RL H N + QY+ S L +LPEI+K L + +++
Sbjct: 640 DQRMKIEMDQPIRLTASQKRL----HVVDNGLEQYNFSSLDNLPEIYKAVLFSRRPQETC 695
Query: 738 ALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRN 797
+L+ CLEAF+KEEPLGPEDMWYCP CK+H+QA KKLDLWRLPE+L+IHLKRFSY+++T+N
Sbjct: 696 SLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTKN 755
Query: 798 KLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGGGHYTASIYHEEGKGWY 857
KLET VDFP+ DLDLS YI + + HYRLYAISNHYG+MGGGHYTA +YHE KGWY
Sbjct: 756 KLETCVDFPVHDLDLSKYIGSRGQQISNHYRLYAISNHYGSMGGGHYTAYVYHEGKKGWY 815
Query: 858 KFDDECVRPITEDSIKTPAAY---------DQTRLD 884
FDD V PI+E+SIKT AAY D RLD
Sbjct: 816 DFDDRHVGPISEESIKTSAAYVLFYRRIQGDDNRLD 851
>Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)
(Ubiquitin thiolesterase 12) (Ubiquitin-specific
processing protease 12) (Deubiquitinating enzyme 12)
Length = 931
Score = 533 bits (1374), Expect = e-151, Method: Compositional matrix adjust.
Identities = 332/791 (41%), Positives = 439/791 (55%), Gaps = 86/791 (10%)
Query: 135 AYPLVLRI-SVRETSILTVKISKKDNPVENYKRAYKIFNIDSQPVHVWDFSGQTN---LI 190
YPL L++ R++ ++IS+K E Y + +++ + +WDF +T LI
Sbjct: 150 VYPLRLKLFDGRDSLERIIRISRKAKVSELYSLVCSLLSVEQSKIDIWDFYQKTKGKKLI 209
Query: 191 LMNE----------------------W-----NRSNHDCCHSELENILEVQVYAMSDSLT 223
+NE W RSN++ LE A + +
Sbjct: 210 NLNETVEEAQLMMDQEIIIEAKADDAWCSDLGTRSNNELALIPLEPSTSSFSIAGGPAFS 269
Query: 224 SKIGGTSKEYTEQS---SADVNDMDVDLSYGSFGRSSSHGLIGLENLGNTCFMNSSIQCL 280
+ Q S + D + S+ + + HGL GL NLGNTCFMNS+IQ L
Sbjct: 270 NGFSSGFGSSFSQDNSFSPLLRDAEDGYSFSNGTKDDIHGLSGLHNLGNTCFMNSAIQSL 329
Query: 281 AHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLWNTERKPVSPHHFKAKIAC 340
HT LV+YFL DY R+IN NPLGL GELA AFGELLR+LW+ R ++P FK K++
Sbjct: 330 VHTPPLVEYFLQDYSREINTENPLGLQGELATAFGELLRKLWSAGRTSIAPRPFKTKLSR 389
Query: 341 FAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLA 400
FAPQFSG+NQHDSQELLAFLLDGLHEDLN+VK KPY EAKDA GRPD+E+A+E W+ H A
Sbjct: 390 FAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIEAKDADGRPDEELAEECWNYHKA 449
Query: 401 RNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSTAKRTMTVTVFSTDGSIE 460
RNDS+IVD + GQYKSTL CP C K SVTFDPFMYLSLP+PST R + VTVFS G
Sbjct: 450 RNDSIIVDKFQGQYKSTLVCPDCKKISVTFDPFMYLSLPLPSTVTRMINVTVFSGTGDAL 509
Query: 461 PISYDVTVPQFGSLNDLVQALSSACSLGDDEILLITEVYNNRILRYLEEPSDSVSLLRDG 520
P+ Y V V + G DL+++LS C L E LL+ EVY++RI RY PS+ + ++D
Sbjct: 510 PMPYTVKVQKNGVCGDLIKSLSVMCCLQSCETLLLAEVYDHRIYRYW-NPSEPLCHVKDE 568
Query: 521 DKLAAFRLPRKYEKSPVVVFTHQYFDERSSIDNITPQMKEFEAPLLAVLPERANGLTLKN 580
DKL A+RLP E V H+ D +S K +PL+ +P ++ +
Sbjct: 569 DKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIGSPLVTCIP--SDSTRKAD 626
Query: 581 IYL---KLLEPLRFSK------STSSLNDSGRCNSGCAAVMMDATPDSDSKFQSAPSENA 631
IY LL P +K S + LN +G G V+ D
Sbjct: 627 IYATVSSLLAPFVRAKVHTLDESATKLNSNGPSLDGI--VLTD----------------- 667
Query: 632 PESSQSETIECQMTEGPSESNIGDTTDSDREAHMEE---FEFYLINGRGEFQQTRIQTDE 688
+ C+ E S SN+ D EA EE F+ +L + + ++ I D
Sbjct: 668 ------NGVTCE--EDVSTSNV------DEEAADEEVLPFQLWLTDDKAN-KREHIDADS 712
Query: 689 VDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLPEIHKLELIPKGN-EDSVALHGCLEAFL 747
+ + RLL++ W YD + L + K + K N +++V L CL+AFL
Sbjct: 713 NGVPGSTMRLLMD--WSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFL 770
Query: 748 KEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFVDFPI 807
K+EPLGP+DMWYCP C +H+QA KKLDLWRLPE+LV+HLKRFSY++F +NKL+TFV+FPI
Sbjct: 771 KDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPI 830
Query: 808 SDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGGGHYTASIYHEEGKGWYKFDDECVRPI 867
DLD+S Y Y LYA+ NHYG MGGGHY+A E WY FDD V +
Sbjct: 831 HDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGHYSAYAKLVEEDSWYHFDDSHVSSV 890
Query: 868 TEDSIKTPAAY 878
E+ I+T +AY
Sbjct: 891 GEEDIRTSSAY 901
>Os12g0536600
Length = 98
Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/43 (100%), Positives = 43/43 (100%)
Query: 759 YCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLET 801
YCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLET
Sbjct: 17 YCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLET 59
>Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1055
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 253 FGRSSSHGLI--GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGEL 310
G +SHG + GL NLGNTCF N+ +Q L +L LG P G L
Sbjct: 214 LGLVNSHGSVIRGLPNLGNTCFFNAVMQSLLALDRLRSKMLG----------PDVPTGAL 263
Query: 311 ALAFGELLRRLW--NTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDL 368
++ +L N +SP + + I PQF GF DS ELL LDGLH +
Sbjct: 264 LMSLKKLFMETSASNDVGGALSPKNLFSNICSKYPQFRGFQMQDSHELLRCFLDGLHTEE 323
Query: 369 NQVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDT-YHGQYKSTLTCPTCSKTS 427
N+ +++ADE S + IVD+ + GQ ST++ C+ +S
Sbjct: 324 NEA----------------RKLADEASSATIP----TIVDSIFGGQLSSTVSSTECTHSS 363
Query: 428 VTFDPFMYLSLPVPS 442
V D F+ LSLPVPS
Sbjct: 364 VKHDQFLDLSLPVPS 378
>Os11g0667400 Similar to Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)
(Ubiquitin thiolesterase 11) (Ubiquitin-specific
processing protease 11) (Deubiquitinating enzyme 11)
Length = 119
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 45/57 (78%)
Query: 709 VGQYDTSMLKSLPEIHKLELIPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKK 765
VGQYDTSMLKSL EIHKLELIPKGNED VALHG LEAFLK E L PED P +K
Sbjct: 4 VGQYDTSMLKSLSEIHKLELIPKGNEDYVALHGYLEAFLKVEQLDPEDNVVLPMLQK 60
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 33/37 (89%), Gaps = 2/37 (5%)
Query: 842 GHYTASIYHEEGKGWYKFDDECVRPITEDSIKTPAAY 878
GH +S HEEGKGWYKFDDECVRPITEDSIKTPAAY
Sbjct: 78 GH--SSQKHEEGKGWYKFDDECVRPITEDSIKTPAAY 112
>Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 978
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
Query: 726 LELIPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIH 785
L+L + + D +L G LE F E L ++ + C CK H++A KKL + P VL I
Sbjct: 598 LDLTVEIDGDISSLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLTISEAPNVLTIA 657
Query: 786 LKRFSYTQFTRNKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGG---G 842
LKR+ +F K+ + FP + L+L Y+ K++ + Y LYA+ H+ M G
Sbjct: 658 LKRYQSGKF--GKINKAIRFPET-LNLQRYMSPKADDTSPVYSLYAVVVHHDIMNAAFSG 714
Query: 843 HYTASIYHEEGKGWYKFDDECVRPITEDSIKTPAAY 878
HY + GK WYK DD V+P++ +++ + AY
Sbjct: 715 HYVCYVKDTHGK-WYKTDDSQVKPVSLENVMSKCAY 749
>Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 415
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 734 EDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYT- 792
E + +L CL++F E L ED ++C C Q+A K++ + + P VLVIHLKRF Y
Sbjct: 251 EQNSSLTSCLKSFFSTEILNGEDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFKYVE 310
Query: 793 QFTRN-KLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNM-GGGHYTASIYH 850
Q +R+ KL V +P+ +L L S SE +DC Y L+A+ H G+ GHY + I
Sbjct: 311 QLSRHKKLSYRVVYPL-ELKLGSM----SEDADCEYSLFAVVVHVGSSPNHGHYVSQI-- 363
Query: 851 EEGKGWYKFDDECVRPITEDSIKT 874
+ W FDD+ V+ E +++T
Sbjct: 364 KSHGNWLSFDDDTVQISEESTLQT 387
>Os04g0647300 Similar to Ubiquitin-specific protease 22
Length = 591
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 260 GLIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGD-YDRDI-NRTNPLGLNGE-------- 309
GL GL NLGNTCFMNS +Q L H L +YFLGD ++R + R P+
Sbjct: 209 GLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAAC 268
Query: 310 LALAFGELLRRLWNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLN 369
LA E+ ++ ER P SP F A + + Q D+ E +LD +HE++
Sbjct: 269 LACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIK 328
Query: 370 QVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVT 429
+ K A G D +A +S G +S +TC C TS T
Sbjct: 329 DDQHKSL-----AQGHGDCCIAHRVFS---------------GILRSDVTCTHCGFTSTT 368
Query: 430 FDPFMYLSL 438
F+P M +SL
Sbjct: 369 FEPCMDISL 377
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 712 YDTSMLKSLPEIH--KLELIPKGNEDSVA-LHGCLEAFLKEEPLGPEDMWYCPCCKKHQQ 768
Y+ S+ + P++H E G V+ L CLE F + E L E ++C CK+ Q+
Sbjct: 383 YNNSLGVANPKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKERQE 442
Query: 769 AMKKLDLWRLPEVLVIHLKRFSYTQFTR--NKLETFVDFPISDLDLSSYI---------- 816
++K++ + RLP V H+KRF ++ + K++ + FP S LD++ Y+
Sbjct: 443 SLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFS-LDMAPYLSSSILRSRFG 501
Query: 817 --IDKSELSDC--------HYRLYAISNHYGNMGGGHYTASIYHEEGKGWYKFDDECVRP 866
I SE SD + ++A+ H G + GHY Y WYK DD V
Sbjct: 502 NRIFPSEASDADSVSEFSSEFEIFAVIMHSGKLEAGHYV--TYLRLNNHWYKCDDAWVTR 559
Query: 867 ITEDSIKTPAAY 878
+ E +++T AY
Sbjct: 560 VEEHTVRTSQAY 571
>Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 4) (AtUBP4)
Length = 367
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 11/144 (7%)
Query: 734 EDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYT- 792
E + ++ CL+ F E L ED ++C C Q+A K++ + + P +LVIHLKRF Y
Sbjct: 205 EQNSSITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIE 264
Query: 793 QFTR-NKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNM-GGGHYTASIYH 850
Q R KL V FP+ +L LS+ S+ D Y L+A+ H G+ GHY + +
Sbjct: 265 QLGRYKKLSYRVVFPM-ELKLST-----SDDVDTEYSLFAVVVHVGSGPNHGHYVSLV-- 316
Query: 851 EEGKGWYKFDDECVRPITEDSIKT 874
+ W FDDE V + E +++T
Sbjct: 317 KSHNHWLFFDDENVEMVEESTLQT 340
>Os08g0527900 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 750
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 86/212 (40%), Gaps = 41/212 (19%)
Query: 240 DVNDMDVDLSYGSFGRSSSHG----LIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYD 295
D M VD G S G + G+ NLGNTC++NS +QCL +L
Sbjct: 218 DEKGMRVDNVAGDHASGSVIGHACPIKGIPNLGNTCYLNSLLQCLLVLGRL--------- 268
Query: 296 RDINRTNPLGLNGELALAFGELLRRLW------NTERKPVSPHHFKAKIACFAPQFSGFN 349
R LGL+ L L G LR L+ N + P A + P+F G
Sbjct: 269 ----RAGILGLDAPLGL-LGSSLRSLFDDADSVNNAGGLLDPEKLLACVRMLNPEFKGNG 323
Query: 350 QHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDT 409
HDSQE L L GL ++ +K + ++ P +VI
Sbjct: 324 MHDSQEALCILRTGLDKEERAMKLSNMQAGAPSAVAP-----------------TVIDSI 366
Query: 410 YHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVP 441
+ GQ T +C CS S++ D F LS+P+P
Sbjct: 367 FGGQLSVTSSCKHCSVRSLSHDVFHDLSVPLP 398
>Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 899
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELAL-AFGELLRRL 321
GL+NLGNTC++NS +QCL +T Y + RT G AL A ++
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRT-----AGFCALCALQNHVKTA 114
Query: 322 WNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKD 381
+ K V+P + C + F Q D+ EL+ LL+ +H+ C P
Sbjct: 115 LQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKC-----CLP------ 163
Query: 382 ASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPV 440
SG P + + A S++ + G+ +S + C CS S FDPF+ LSL +
Sbjct: 164 -SGVPSESPS--------AYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI 213
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 736 SVALHGCLEAFLKEEPL-GPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQF 794
+ +L L+ F EE L G E + C C+K A KK + + P VL IHLKRFS
Sbjct: 216 ATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFN- 274
Query: 795 TRNKLETFVDF-PISDLDLSSYIIDKSELSDCHYRLYAISNHYG-NMGGGHYTASIYHEE 852
R K++ VDF P+ LDL +I D S+ +D Y LY + H G N GHY +
Sbjct: 275 PREKIDKKVDFQPM--LDLKPFISD-SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSS 331
Query: 853 GKGWYKFDDECVRPITEDSIKTPAAY 878
G W+ DD VR + E + AY
Sbjct: 332 GM-WHNLDDNQVRQVREADVLRQKAY 356
>Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 918
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 726 LELIPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIH 785
L+L + + D L L F E L ++ + C CK +++A KKL + P +L I
Sbjct: 543 LDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIA 602
Query: 786 LKRFSYTQFTR-NKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGG--- 841
LKR+ F + NK F ++ L+LS+Y+ ++S Y+LYA+ H+ M
Sbjct: 603 LKRYQSGNFGKINKAVRFTEY----LNLSNYMSTADDISPV-YQLYAVVVHHDVMNAAFS 657
Query: 842 GHYTASIYHEEGKGWYKFDDECVRPITEDSIKTPAAY 878
GHY + +GK W+K DD V+P++ + + + AY
Sbjct: 658 GHYVCYVKDTQGK-WHKMDDSQVKPVSLEKVLSKCAY 693
>Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 944
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 735 DSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQF 794
D+ +L CL+ F E L ++ + C C + +A K+L +++ P +L I LKRF +F
Sbjct: 239 DADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRF 298
Query: 795 TRNKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGG---GHYTASIYHE 851
KL V FP+ LDL+ Y + ++ SD Y LYA+ H + GHY I +
Sbjct: 299 --GKLNKRVTFPMK-LDLTPY-MSSTDGSD-QYDLYAVVVHLDMLNASFFGHYICYIKNY 353
Query: 852 EGKGWYKFDDECVRPITEDSIKTPAAY 878
G+ WYK DD V + E+ + AY
Sbjct: 354 RGR-WYKIDDCKVMAVDEEEVHAQGAY 379
>Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 3) (AtUBP3)
Length = 366
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 734 EDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYT- 792
E + ++ CL+ F E L ED ++C C Q+A K++ + + P +LVIHLKRF Y
Sbjct: 203 EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYIE 262
Query: 793 QFTR-NKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNM-GGGHYTASIYH 850
Q R KL V FP L +I+ + SD Y L+A+ H G+ GHY + +
Sbjct: 263 QLGRYKKLSYRVVFP-----LELKLINTVDNSDLEYSLFAVLVHVGSGPNHGHYISLV-- 315
Query: 851 EEGKGWYKFDDECVRPITEDSIKT 874
+ W FDDE V E ++T
Sbjct: 316 KSHNHWLFFDDENVEMTDESMVQT 339
>Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1185
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLW 322
GL+N GNTC++NS +QCL +T V Y RT +G AL +
Sbjct: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRT--IGFCALCALQ--RHVNSAL 142
Query: 323 NTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDA 382
+ K + P H + C + F Q D+ EL+ LL+ +H+ C P
Sbjct: 143 QSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHK-----CCLP------- 190
Query: 383 SGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPS 442
SG P + A S++ + G +S + C TCS S FDPF+ LSL + +
Sbjct: 191 SGVPSGSPS--------AYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIAN 242
Query: 443 TAKRTMTVTVFSTD 456
A + F+ +
Sbjct: 243 AATLVKALQHFTAE 256
>Os11g0473200 Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)
(Ubiquitin thiolesterase 12) (Ubiquitin-specific
processing protease 12) (Deubiquitinating enzyme 12)
Length = 382
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 48/217 (22%)
Query: 135 AYPLVLRISVR-ETSILTVKISKKDNPVENYKRAYKIFNIDSQPVHVWDFSGQTNLILMN 193
YPL L++ + + ++ISKKD E +K+A ++F++ V +WD+ G+T LM+
Sbjct: 154 VYPLRLQLLLAPKGEQAVIRISKKDTVGELHKKACEVFDLIPDEVCIWDYYGRTRHSLMD 213
Query: 194 EWNRSNHDCCHSELENILEVQVYAMSDSLTSKIGG-----TSKEYTEQSS----ADVNDM 244
++ D ++IL V +D+ S GG EY E+ S AD +
Sbjct: 214 NLEKTLDDANIQMDQDIL---VEVTTDANGSLDGGCIGSIQENEYLERESTSLIADASKS 270
Query: 245 DVD-----------------LSYGSFGRSSS------HGLIGLENLGN------------ 269
+ L+ + RSS+ HG + G+
Sbjct: 271 GLSNENFASNNYTSRSYSSSLTQSQYLRSSNGDLDNMHGTSAMITRGSPLGLTGLLNLGN 330
Query: 270 TCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGL 306
TCFMNS+IQCL HT + YF DY R+IN NPLG+
Sbjct: 331 TCFMNSAIQCLVHTPEFARYFREDYHREINWQNPLGM 367
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 29,866,247
Number of extensions: 1270489
Number of successful extensions: 3089
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 3081
Number of HSP's successfully gapped: 21
Length of query: 911
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 801
Effective length of database: 11,292,261
Effective search space: 9045101061
Effective search space used: 9045101061
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)