Os08g0527900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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Os08g0527900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 449 | 0.996 | 3.46 | -0.894 | 0.181 | -1.3 | 0.185 | -0.281 | -0.478 | 23.8 | 29.06 | 687 | -- | -- |
| 448.55 | 0.986 | 3.46 | -0.951 | 0.168 | -1.29 | 0.142 | -- | -0.502 | 0.349 | 28.7 | 684 | -- | -- |
| 448.47 | 0.986 | 3.45 | -0.863 | 0.17 | -1.25 | -- | -0.588 | -0.483 | 0.551 | 28.7 | 682 | -- | -- |
| 448.58 | 0.986 | 3.47 | -0.96 | 0.172 | -1.33 | -- | -- | -0.511 | 1.26 | 28.7 | 683 | -- | -- |
| 449.81 | 0.988 | 3.46 | -0.854 | -- | -1.26 | -- | -0.708 | -0.496 | -- | 28.5 | 695 | -- | -- |
| 482.32 | 1.03 | 3.46 | -0.687 | 0.606 | -- | 0.794 | -- | -0.396 | 20.1 | -- | -- | -- | -- |
| 484.23 | 1.03 | 3.46 | -0.709 | 0.605 | -- | -- | -- | -0.396 | 20.2 | -- | -- | -- | -- |
| 449.97 | 0.988 | 3.47 | -0.976 | -- | -1.34 | -- | -- | -0.529 | -- | 28.4 | 721 | -- | -- |
| 471.82 | 1.01 | 3.44 | -- | 0.199 | -1.17 | -- | -- | -0.396 | 1.1 | 28.7 | 653 | -- | -- |
| 504.38 | 1.05 | 3.44 | -0.714 | -- | -- | -- | -- | -0.403 | -- | -- | -- | -- | -- |
| 497.5 | 1.04 | 3.44 | -- | 0.609 | -- | -- | -- | -0.317 | 20.1 | -- | -- | -- | -- |
| 473.72 | 1.01 | 3.44 | -- | -- | -1.2 | -- | -- | -0.386 | -- | 28.72 | 682 | -- | -- |
| 517.85 | 1.06 | 3.42 | -- | -- | -- | -- | -- | -0.324 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 437.88 | humidity | 70 | 90 | < th | dose independent | rect. | 17 | 3 |
| 13 | 439.24 | humidity | 70 | 90 | < th | dose dependent | rect. | 16 | 4 |
| 60 | 439.94 | humidity | 70 | 10 | < th | dose independent | rect. | 17 | 17 |
| 73 | 440.43 | humidity | 90 | 90 | < th | dose dependent | rect. | 16 | 8 |
| 95 | 442.08 | humidity | 70 | 90 | < th | dose independent | rect. | 16 | 18 |
| 97 | 442.15 | humidity | 90 | 90 | < th | dose dependent | rect. | 16 | 14 |
| 103 | 442.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 6 |
| 197 | 445.29 | humidity | 90 | 270 | < th | dose dependent | rect. | 14 | 10 |
| 222 | 445.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 21 |
| 226 | 445.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 11 |
| 278 | 446.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 11 |
| 280 | 446.79 | wind | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 282 | 446.80 | humidity | 70 | 10 | < th | dose independent | sin | 10 | NA |
| 286 | 447.00 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 1 |
| 366 | 447.80 | temperature | 20 | 270 | > th | dose dependent | sin | 17 | NA |
| 369 | 447.82 | humidity | 70 | 90 | < th | dose independent | sin | 11 | NA |
| 374 | 447.86 | humidity | 80 | 10 | < th | dose independent | rect. | 7 | 1 |
| 383 | 447.98 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 12 |
| 386 | 448.00 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 18 |
| 394 | 448.14 | temperature | 10 | 270 | > th | dose dependent | sin | 17 | NA |
| 407 | 448.17 | radiation | 40 | 720 | < th | dose independent | rect. | 13 | 9 |
| 436 | 448.48 | humidity | 70 | 90 | > th | dose independent | sin | 11 | NA |
| 475 | 448.69 | humidity | 80 | 10 | < th | dose independent | rect. | 23 | 9 |
| 499 | 448.92 | temperature | 25 | 720 | > th | dose dependent | sin | 22 | NA |
| 535 | 449.18 | temperature | 25 | 720 | > th | dose dependent | rect. | 3 | 15 |
| 542 | 449.23 | radiation | 30 | 720 | < th | dose independent | rect. | 18 | 17 |
| 566 | 449.26 | radiation | 40 | 720 | < th | dose independent | rect. | 10 | 12 |
| 575 | 449.33 | temperature | 20 | 90 | > th | dose dependent | sin | 14 | NA |
| 628 | 449.60 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 20 |
| 651 | 449.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 21 |
| 656 | 449.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 18 |
| 666 | 449.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 672 | 449.87 | temperature | 30 | 270 | > th | dose independent | rect. | 14 | 5 |
| 673 | 449.87 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 5 |
| 688 | 449.89 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 22 |
| 695 | 449.96 | radiation | 40 | 720 | < th | dose dependent | rect. | 14 | 8 |
| 710 | 450.06 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 12 |
| 761 | 450.25 | humidity | 90 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 764 | 450.28 | temperature | 30 | 270 | < th | dose independent | sin | 16 | NA |
| 794 | 450.41 | temperature | 10 | 720 | > th | dose dependent | sin | 22 | NA |
| 835 | 450.53 | humidity | 80 | 270 | < th | dose dependent | sin | 14 | NA |
| 842 | 450.55 | temperature | 30 | 270 | > th | dose independent | sin | 14 | NA |
| 890 | 450.74 | humidity | 70 | 270 | > th | dose independent | rect. | 15 | 14 |
| 907 | 450.79 | temperature | 25 | 90 | > th | dose independent | rect. | 16 | 5 |
| 950 | 450.95 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 8 |
| 958 | 450.98 | temperature | 25 | 90 | > th | dose independent | rect. | 16 | 8 |
| 989 | 451.07 | temperature | 30 | 90 | < th | dose dependent | sin | 15 | NA |