FiT-DB / Search/ Help/ Sample detail
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Os10g0160000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15) (Ubiquitin thiolesterase 12) (Ubiquitin-specific processing protease 12) (Deubiquitinating enzyme 12).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.92 | 0.22 | 9.71 | 0.146 | 0.527 | -0.373 | -1.07 | -0.534 | -0.00676 | 4.7 | 79.24 | 821 | -- | -- |
| 22.32 | 0.22 | 9.71 | 0.198 | 0.53 | -0.408 | -1.02 | -- | 0.000827 | 4.48 | 79 | 837 | -- | -- |
| 24.49 | 0.231 | 9.7 | 0.117 | 0.637 | -0.354 | -- | -0.853 | -0.00265 | 5.18 | 79.66 | 1105 | -- | -- |
| 25.04 | 0.233 | 9.71 | 0.198 | 0.547 | -0.387 | -- | -- | 0.00127 | 4.72 | 78.97 | 872 | -- | -- |
| 29.93 | 0.255 | 9.71 | 0.2 | -- | -0.554 | -- | 0.172 | 0.0265 | -- | 80 | 477 | -- | -- |
| 25.77 | 0.238 | 9.71 | 0.175 | 0.636 | -- | -0.892 | -- | -0.014 | 5.52 | -- | -- | -- | -- |
| 27.64 | 0.246 | 9.7 | 0.173 | 0.633 | -- | -- | -- | -0.00971 | 5.77 | -- | -- | -- | -- |
| 30.06 | 0.255 | 9.71 | 0.194 | -- | -0.554 | -- | -- | 0.0208 | -- | 80 | 474 | -- | -- |
| 26.06 | 0.238 | 9.71 | -- | 0.571 | -0.38 | -- | -- | -0.0212 | 4.77 | 79 | 912 | -- | -- |
| 48.43 | 0.325 | 9.71 | 0.193 | -- | -- | -- | -- | 0.0052 | -- | -- | -- | -- | -- |
| 28.42 | 0.249 | 9.71 | -- | 0.636 | -- | -- | -- | -0.029 | 5.76 | -- | -- | -- | -- |
| 30.62 | 0.258 | 9.71 | -- | -- | -0.548 | -- | -- | -0.00113 | -- | 81 | 445 | -- | -- |
| 49.41 | 0.328 | 9.72 | -- | -- | -- | -- | -- | -0.0162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.69 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 3 | 20.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 6 | 20.93 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 7 | 20.93 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 11 | 21.03 | wind | 1.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 15 | 21.15 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 16 | 21.24 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 18 | 21.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 21 | 21.29 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 23 | 21.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 12 |
| 24 | 21.30 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 26 | 21.32 | wind | 1.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 42 | 21.42 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 48 | 21.46 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 52 | 21.48 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 64 | 21.53 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 74 | 21.59 | radiation | 1.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 79 | 21.62 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 11 |
| 97 | 21.65 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 105 | 21.69 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 106 | 21.69 | wind | 1.0 | 43200 | < th | dose independent | rect. | 11 | 17 |
| 107 | 21.69 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 108 | 21.70 | wind | 1.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 111 | 21.70 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 18 |
| 117 | 21.72 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 123 | 21.74 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 132 | 21.75 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 135 | 21.76 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 140 | 21.78 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 148 | 21.79 | humidity | 80.0 | 720 | < th | dose independent | rect. | 8 | 20 |
| 160 | 21.80 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 161 | 21.81 | precipitation | 0.1 | 720 | < th | dose independent | sin | 1 | NA |
| 163 | 21.81 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 167 | 21.81 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 1 | NA |
| 171 | 21.82 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 16 |
| 173 | 21.82 | humidity | 80.0 | 720 | < th | dose independent | rect. | 22 | 22 |
| 175 | 21.82 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 197 | 21.86 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 200 | 21.86 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 208 | 21.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 7 | 6 |
| 232 | 21.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 233 | 21.91 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 234 | 21.91 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 240 | 21.91 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 249 | 21.92 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 20 |
| 276 | 21.94 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 282 | 21.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 288 | 21.95 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 299 | 21.96 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 17 |
| 319 | 21.97 | humidity | 80.0 | 720 | < th | dose independent | rect. | 14 | 23 |
| 326 | 21.98 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 330 | 21.98 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 15 |
| 336 | 21.98 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 23 |
| 344 | 21.98 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 15 |
| 345 | 21.98 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 348 | 21.99 | humidity | 80.0 | 720 | < th | dose independent | no | NA | NA |
| 349 | 21.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 351 | 21.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 353 | 21.99 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 368 | 21.99 | humidity | 80.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 383 | 22.01 | radiation | 1.0 | 720 | < th | dose independent | sin | 16 | NA |
| 385 | 22.01 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 396 | 22.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 22 |
| 397 | 22.01 | humidity | 80.0 | 720 | > th | dose independent | rect. | 22 | 23 |
| 404 | 22.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 407 | 22.02 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 411 | 22.02 | humidity | 80.0 | 720 | < th | dose independent | rect. | 8 | 12 |
| 415 | 22.02 | humidity | 80.0 | 720 | > th | dose independent | rect. | 1 | 22 |
| 423 | 22.02 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 432 | 22.03 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 10 |
| 435 | 22.03 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 453 | 22.03 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 23 |
| 459 | 22.03 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 18 |
| 460 | 22.04 | radiation | 1.0 | 720 | > th | dose independent | sin | 17 | NA |
| 464 | 22.04 | wind | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 473 | 22.04 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 20 |
| 478 | 22.04 | wind | 3.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 519 | 22.06 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 12 |
| 524 | 22.06 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 16 |
| 540 | 22.06 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 23 |
| 541 | 22.06 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 23 |
| 565 | 22.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 18 |
| 573 | 22.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 597 | 22.08 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 602 | 22.09 | humidity | 80.0 | 720 | > th | dose independent | no | NA | NA |
| 603 | 22.09 | humidity | 80.0 | 720 | < th | dose independent | sin | 23 | NA |
| 613 | 22.09 | humidity | 80.0 | 720 | > th | dose independent | rect. | 17 | 23 |
| 617 | 22.09 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 635 | 22.10 | humidity | 80.0 | 720 | > th | dose independent | rect. | 14 | 23 |
| 642 | 22.10 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 645 | 22.11 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 659 | 22.11 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 23 |
| 672 | 22.12 | wind | 3.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 706 | 22.13 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 750 | 22.15 | wind | 3.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 755 | 22.15 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 845 | 22.17 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 10 |
| 883 | 22.19 | wind | 3.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 900 | 22.19 | wind | 3.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 984 | 22.21 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 21 |
| 999 | 22.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 18 |
