BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0160000 Os10g0160000|AK111889
(931 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrola... 1845 0.0
Os12g0621000 Similar to Ubiquitin-specific protease 8 (Frag... 598 e-171
Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 548 e-155
Os11g0473200 Similar to Ubiquitin carboxyl-terminal hydrola... 210 4e-54
Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hyd... 96 1e-19
Os04g0647300 Similar to Ubiquitin-specific protease 22 96 1e-19
Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 92 3e-18
Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 88 3e-17
Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 87 6e-17
Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrola... 81 4e-15
Os12g0536600 80 7e-15
Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 77 5e-14
Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hyd... 77 6e-14
Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hyd... 76 1e-13
Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrola... 75 2e-13
Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 74 4e-13
Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hyd... 74 6e-13
Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hyd... 70 6e-12
>Os10g0160000 Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)
(Ubiquitin thiolesterase 12) (Ubiquitin-specific
processing protease 12) (Deubiquitinating enzyme 12)
Length = 931
Score = 1845 bits (4780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/931 (97%), Positives = 905/931 (97%)
Query: 1 MTIPSAEGFLHAASCLPCTAEEERDLVVALTREAEENVKDGDLRYLVSHSWWLNWQSYVG 60
MTIPSAEGFLHAASCLPCTAEEERDLVVALTREAEENVKDGDLRYLVSHSWWLNWQSYVG
Sbjct: 1 MTIPSAEGFLHAASCLPCTAEEERDLVVALTREAEENVKDGDLRYLVSHSWWLNWQSYVG 60
Query: 61 LIKPDENDADMLPQAPSRPGEIDNSKLVSEESSSIGDEPELQRTLREGDDYALVPQEVWR 120
LIKPDENDADMLPQAPSRPGEIDNSKLVSEESSSIGDEPELQRTLREGDDYALVPQEVWR
Sbjct: 61 LIKPDENDADMLPQAPSRPGEIDNSKLVSEESSSIGDEPELQRTLREGDDYALVPQEVWR 120
Query: 121 KLHEWYKGGPELSRRVICSSPTSRSYIVDVYPLRLKLFDGRDSLERIIRISRKAKVSELY 180
KLHEWYKGGPELSRRVICSSPTSRSYIVDVYPLRLKLFDGRDSLERIIRISRKAKVSELY
Sbjct: 121 KLHEWYKGGPELSRRVICSSPTSRSYIVDVYPLRLKLFDGRDSLERIIRISRKAKVSELY 180
Query: 181 SLVCSLLSVEQSKIDIWDFYQKTKGKKLINLNETVEEAQLMMDQEIIIEAKADDAWCSDL 240
SLVCSLLSVEQSKIDIWDFYQKTKGKKLINLNETVEEAQLMMDQEIIIEAKADDAWCSDL
Sbjct: 181 SLVCSLLSVEQSKIDIWDFYQKTKGKKLINLNETVEEAQLMMDQEIIIEAKADDAWCSDL 240
Query: 241 GTRSNNELALIPLEPSTSSFSIXXXXXXXXXXXXXXXXXXXXXXXXXXLLRDAEDGYSFS 300
GTRSNNELALIPLEPSTSSFSI LLRDAEDGYSFS
Sbjct: 241 GTRSNNELALIPLEPSTSSFSIAGGPAFSNGFSSGFGSSFSQDNSFSPLLRDAEDGYSFS 300
Query: 301 NGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGELA 360
NGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGELA
Sbjct: 301 NGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGELA 360
Query: 361 TAFGELLRKLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 420
TAFGELLRKLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV
Sbjct: 361 TAFGELLRKLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 420
Query: 421 KKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFD 480
KKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFD
Sbjct: 421 KKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFD 480
Query: 481 PFMYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCE 540
PFMYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCE
Sbjct: 481 PFMYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCE 540
Query: 541 TLLLAEVYDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTSES 600
TLLLAEVYDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTSES
Sbjct: 541 TLLLAEVYDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTSES 600
Query: 601 MFNLSRKLIGSPLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKLNSNGPSL 660
MFNLSRKLIGSPLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKLNSNGPSL
Sbjct: 601 MFNLSRKLIGSPLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKLNSNGPSL 660
Query: 661 DGIVLTDNGVTCEEDVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPGSTM 720
DGIVLTDNGVTCEEDVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPGSTM
Sbjct: 661 DGIVLTDNGVTCEEDVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPGSTM 720
Query: 721 RLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDM 780
RLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDM
Sbjct: 721 RLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDM 780
Query: 781 WYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYAN 840
WYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYAN
Sbjct: 781 WYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYAN 840
Query: 841 HSRGDQPPIYELYAVINHYGGMGGGHYSAYAKLVEEDSWYHFDDSHVSSVGEEDIRTSSA 900
HSRGDQPPIYELYAVINHYGGMGGGHYSAYAKLVEEDSWYHFDDSHVSSVGEEDIRTSSA
Sbjct: 841 HSRGDQPPIYELYAVINHYGGMGGGHYSAYAKLVEEDSWYHFDDSHVSSVGEEDIRTSSA 900
Query: 901 YLLFYRRVGSSSCSVSKNVAVDTDMVDSLDT 931
YLLFYRRVGSSSCSVSKNVAVDTDMVDSLDT
Sbjct: 901 YLLFYRRVGSSSCSVSKNVAVDTDMVDSLDT 931
>Os12g0621000 Similar to Ubiquitin-specific protease 8 (Fragment)
Length = 864
Score = 598 bits (1543), Expect = e-171, Method: Compositional matrix adjust.
Identities = 378/921 (41%), Positives = 511/921 (55%), Gaps = 106/921 (11%)
Query: 16 LPCTAEEERDLVVALTREAEENVKDGDLR-YLVSHSWWLNWQSYVGLIKPDENDADMLPQ 74
+P T +++ + D D R +LV H WW Q G+ +A +P
Sbjct: 1 MPATPDDDPPAAASEAPSTSSAAADEDDRVFLVLHRWWREAQEGGGI------EAAGVPY 54
Query: 75 APSRPGEIDNSKLVSEESSSIGDEPELQRTLREGDD----------------YALVPQEV 118
A + G + S I D+ TLR DD YALV ++
Sbjct: 55 AAAPSGPTSYGIGMKVLSMFISDQ---AFTLRRADDLLQPDASASNAASSRTYALVAADL 111
Query: 119 WRKLHEWY-KGGPELSRRVICSSPTSRSYIVDVYPLRLKLFDGRDSLERIIRISRKAKVS 177
+ K W+ G ++ + S V++YP+ L++ RD+ ++IS+K +
Sbjct: 112 FSKARAWHIDSGKNAGKKSLSIEEGS----VNIYPIMLRVSVTRDTNALTVKISKKDNSA 167
Query: 178 ELYSLVCSLLSVEQSKIDIWDFYQKTKGKKLINLNE--TVEEAQLMMDQEIIIEAKADD- 234
E + +L+ + + IWDF +T I +NE + + DQE+ +E D
Sbjct: 168 ENFKRANKILTSDSEPVHIWDFSGRTT---FILMNEWNRMPQDTRSSDQEMPLEIHFYDL 224
Query: 235 AWCSDLGTRSNNELALIPLEPSTSSFSIXXXXXXXXXXXXXXXXXXXXXXXXXXLLRDAE 294
+ + GT + + + S S+ SI
Sbjct: 225 SEPTANGTNGKKDELALTMSRSMSNGSIMGMDLDSS------------------------ 260
Query: 295 DGYSFSNGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLG 354
G S GT GL GL NLGNTCFMNSA+Q L HT L
Sbjct: 261 -GSSKQVGT-----GLIGLDNLGNTCFMNSAVQCLAHTSKL------------------- 295
Query: 355 LQGELATAFGELLRKLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLH 414
GELA +FG+LLRKLW+ RT +APR FK KL+RFAPQFSG+NQHDSQELLAFLLDGLH
Sbjct: 296 --GELAYSFGDLLRKLWALDRTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLDGLH 353
Query: 415 EDLNRVKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKK 474
EDLNRVK KPY EAKD+DGRPDEE+A+E W H ARNDSIIVD QGQYKSTLVCPDC+K
Sbjct: 354 EDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDSIIVDICQGQYKSTLVCPDCRK 413
Query: 475 ISVTFDPFMYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMC 534
+SVTFDPFMYLSLPLPST R + +TVF+ G P PYTV V K+G LI +LS+ C
Sbjct: 414 VSVTFDPFMYLSLPLPSTTMRTMTITVFNTDGTTGPSPYTVSVPKSGDTKTLIDALSIAC 473
Query: 535 CLQSCETLLLAEVYDHRIYRYW-NPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVV 593
L+ E LL+AEVY+ + RY PSE + ++D D+LVAY+LP SE+ V ++ +
Sbjct: 474 SLKGDERLLVAEVYNSALIRYLEEPSEVISLIRDGDRLVAYKLPKDSEDAPIVVFRNQRM 533
Query: 594 DRYTSESMFNLSRKLIGSPLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKL 653
+ T S S K G+PLV+ +P D+ + I+ ++ PF K D+S+
Sbjct: 534 ES-TLTSFGRKSWKSFGTPLVSSLP-DTINGSTIFELYQKVMTPFRVPK----DDSSGAD 587
Query: 654 NSNGPSLDGIVLTDNGVTCEEDVSTS----NVDEEAADEEVLPFQLWLTDDKANKREHID 709
+ G S TD + + STS + D+E E+ + F ++ + ++R I+
Sbjct: 588 HIIGKSSPVEETTDVDMNSDATESTSINNNDCDDETMTEDGMQF-YFINERFPDQRMKIE 646
Query: 710 ADSN-GVPGSTMRLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDA 768
D + S RL + D E Y+ +D L ++K S++ QE +L++CL+A
Sbjct: 647 MDQPIRLTASQKRLHV--VDNGLEQYNFSSLDNLPEIYKAVLFSRRP-QETCSLYACLEA 703
Query: 769 FLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNF 828
F+K+EPLGP+DMWYCP C EH+QASKKLDLWRLPEIL++HLKRFSYSR+ KNKL+T V+F
Sbjct: 704 FIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDF 763
Query: 829 PIHDLDMSRYANHSRGDQ-PPIYELYAVINHYGGMGGGHYSAYAKLVEEDSWYHFDDSHV 887
P+HDLD+S+Y SRG Q Y LYA+ NHYG MGGGHY+AY + WY FDD HV
Sbjct: 764 PVHDLDLSKYIG-SRGQQISNHYRLYAISNHYGSMGGGHYTAYVYHEGKKGWYDFDDRHV 822
Query: 888 SSVGEEDIRTSSAYLLFYRRV 908
+ EE I+TS+AY+LFYRR+
Sbjct: 823 GPISEESIKTSAAYVLFYRRI 843
>Os07g0160000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 911
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 329/791 (41%), Positives = 435/791 (54%), Gaps = 86/791 (10%)
Query: 150 VYPLRLKLFDGRDSLERIIRISRKAKVSELYSLVCSLLSVEQSKIDIWDFYQKTKGKKLI 209
YPL L++ R++ ++IS+K E Y + +++ + +WDF +T LI
Sbjct: 135 AYPLVLRI-SVRETSILTVKISKKDNPVENYKRAYKIFNIDSQPVHVWDFSGQTN---LI 190
Query: 210 NLNETVEEAQLMMDQEIIIEAKADDAWCSDLGTRSNNELALIPLEPSTSSFSIXXXXXXX 269
+NE W RSN++ LE + +
Sbjct: 191 LMNE----------------------W-----NRSNHDCCHSELE---NILEVQVYAMSD 220
Query: 270 XXXXXXXXXXXXXXXXXXXLLRDAEDGYSFSNGTKDDIHGLSGLHNLGNTCFMNSAIQSL 329
+ D + S+ + + HGL GL NLGNTCFMNS+IQ L
Sbjct: 221 SLTSKIGGTSKEYTEQSSADVNDMDVDLSYGSFGRSSSHGLIGLENLGNTCFMNSSIQCL 280
Query: 330 VHTPPLVEYFLQDYSREINTENPLGLQGELATAFGELLRKLWSAGRTSIAPRPFKTKLSR 389
HT LV+YFL DY R+IN NPLGL GELA AFGELLR+LW+ R ++P FK K++
Sbjct: 281 AHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLWNTERKPVSPHHFKAKIAC 340
Query: 390 FAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIEAKDADGRPDEELAEECWNYHKA 449
FAPQFSG+NQHDSQELLAFLLDGLHEDLN+VK KPY EAKDA GRPD+E+A+E W+ H A
Sbjct: 341 FAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLA 400
Query: 450 RNDSIIVDKFQGQYKSTLVCPDCKKISVTFDPFMYLSLPLPSTVTRMINVTVFSGTGDAL 509
RNDS+IVD + GQYKSTL CP C K SVTFDPFMYLSLP+PST R + VTVFS G
Sbjct: 401 RNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSTAKRTMTVTVFSTDGSIE 460
Query: 510 PMPYTVKVQKNGVCGDLIKSLSVMCCLQSCETLLLAEVYDHRIYRYW-NPSEPLCHVKDE 568
P+ Y V V + G DL+++LS C L E LL+ EVY++RI RY PS+ + ++D
Sbjct: 461 PISYDVTVPQFGSLNDLVQALSSACSLGDDEILLITEVYNNRILRYLEEPSDSVSLLRDG 520
Query: 569 DKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIGSPLVTCIP--SDSTRKAD 626
DKL A+RLP E V H+ D +S K +PL+ +P ++ +
Sbjct: 521 DKLAAFRLPRKYEKSPVVVFTHQYFDERSSIDNITPQMKEFEAPLLAVLPERANGLTLKN 580
Query: 627 IYATVSSLLAPFVRAKVHTLDESATKLNSNGPSLDGI--VLTD----------------- 667
IY LL P +K S + LN +G G V+ D
Sbjct: 581 IYL---KLLEPLRFSK------STSSLNDSGRCNSGCAAVMMDATPDSDSKFQSAPSENA 631
Query: 668 ------NGVTCE--EDVSTSNV------DEEAADEEVLPFQLWLTDDKAN-KREHIDADS 712
+ C+ E S SN+ D EA EE F+ +L + + ++ I D
Sbjct: 632 PESSQSETIECQMTEGPSESNIGDTTDSDREAHMEE---FEFYLINGRGEFQQTRIQTDE 688
Query: 713 NGVPGSTMRLLMD--WSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFL 770
+ + RLL++ W YD + L + K + K N +++V L CL+AFL
Sbjct: 689 VDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLPEIHKLELIPKGN-EDSVALHGCLEAFL 747
Query: 771 KDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPI 830
K+EPLGP+DMWYCP C +H+QA KKLDLWRLPE+LV+HLKRFSY++F +NKL+TFV+FPI
Sbjct: 748 KEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFVDFPI 807
Query: 831 HDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGHYSAYAKLVEEDSWYHFDDSHVSSV 890
DLD+S Y Y LYA+ NHYG MGGGHY+A E WY FDD V +
Sbjct: 808 SDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGGGHYTASIYHEEGKGWYKFDDECVRPI 867
Query: 891 GEEDIRTSSAY 901
E+ I+T +AY
Sbjct: 868 TEDSIKTPAAY 878
>Os11g0473200 Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)
(Ubiquitin thiolesterase 12) (Ubiquitin-specific
processing protease 12) (Deubiquitinating enzyme 12)
Length = 382
Score = 210 bits (535), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 185/363 (50%), Gaps = 40/363 (11%)
Query: 20 AEEERDLVVALTREAEENVKDGDLRYLVSHSWWLNWQSYV--GLIKPDENDADMLPQAPS 77
AEEER L+ +T AE + K+GD +L++H WW +W YV L N + +
Sbjct: 18 AEEERALIRDITVAAEAHAKEGDTFFLITHRWWQSWIDYVIQDLANSTNNGSHHHEHGSN 77
Query: 78 ---RPGEIDNSKLVSEESSSIGD-EPELQRTLREGDDYALVPQEVWRKLHEWYKGGPELS 133
RPG IDN+ L+ + +S + + E EL TL EG DY L+PQ+VW KLH WY GGP L
Sbjct: 78 VLRRPGAIDNTDLIDDTASEVSNMEIELHDTLVEGRDYILLPQQVWEKLHGWYGGGPTLP 137
Query: 134 RRVICSSPTSRSYIVDVYPLRLKLFDGRDSLERIIRISRKAKVSELYSLVCSLLSVEQSK 193
R+ I + + ++VYPLRL+L + +IRIS+K V EL+ C + + +
Sbjct: 138 RKAINTGLSQTDLAIEVYPLRLQLLLAPKGEQAVIRISKKDTVGELHKKACEVFDLIPDE 197
Query: 194 IDIWDFYQKTKGKKLINLNETVEEAQLMMDQEIIIEAKAD-----DAWCSDLGTRSNNEL 248
+ IWD+Y +T+ + NL +T+++A + MDQ+I++E D D C +G+ NE
Sbjct: 198 VCIWDYYGRTRHSLMDNLEKTLDDANIQMDQDILVEVTTDANGSLDGGC--IGSIQENEY 255
Query: 249 ALIPLEPSTSSF----SIXXXXXXXXXXXXXXXXXXXXXXXXXXLLRDAEDGYSFSNGTK 304
LE ++S S LR SNG
Sbjct: 256 ----LERESTSLIADASKSGLSNENFASNNYTSRSYSSSLTQSQYLRS-------SNGDL 304
Query: 305 DDIHGLSGLHNLGN------------TCFMNSAIQSLVHTPPLVEYFLQDYSREINTENP 352
D++HG S + G+ TCFMNSAIQ LVHTP YF +DY REIN +NP
Sbjct: 305 DNMHGTSAMITRGSPLGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHREINWQNP 364
Query: 353 LGL 355
LG+
Sbjct: 365 LGM 367
>Os08g0478500 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 978
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 761 NLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKN 820
+L L+ F E L D+ + C RC H++A KKL + P +L + LKR+ +F
Sbjct: 610 SLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGKF--G 667
Query: 821 KLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGG---GHYSAYAKLVEED 877
K++ + FP L++ RY + D P+Y LYAV+ H+ M GHY Y K
Sbjct: 668 KINKAIRFP-ETLNLQRYMSPKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDT-HG 725
Query: 878 SWYHFDDSHVSSVGEEDIRTSSAYLLFYRR 907
WY DDS V V E++ + AY+L Y R
Sbjct: 726 KWYKTDDSQVKPVSLENVMSKCAYMLLYAR 755
>Os04g0647300 Similar to Ubiquitin-specific protease 22
Length = 591
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 25/167 (14%)
Query: 761 NLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYS--RFM 818
L CL+ F + E L + ++C RC E +++ K++ + RLP + H+KRF +S + M
Sbjct: 412 TLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEHSSVKKM 471
Query: 819 KNKLDTFVNFPIHDLDM----------SRYANH----------SRGDQPPIYELYAVINH 858
K+D + FP LDM SR+ N S + +E++AVI H
Sbjct: 472 SRKVDHCLQFPF-SLDMAPYLSSSILRSRFGNRIFPSEASDADSVSEFSSEFEIFAVIMH 530
Query: 859 YGGMGGGHYSAYAKLVEEDSWYHFDDSHVSSVGEEDIRTSSAYLLFY 905
G + GHY Y +L + WY DD+ V+ V E +RTS AY+LFY
Sbjct: 531 SGKLEAGHYVTYLRL--NNHWYKCDDAWVTRVEEHTVRTSQAYMLFY 575
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 309 GLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQD-YSREI-NTENPLGLQGE-------- 358
GL GL+NLGNTCFMNS +Q+L+H PPL YFL D ++R + + P+ +
Sbjct: 209 GLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAAC 268
Query: 359 LATAFGELLRKLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLN 418
LA E+ +S RT +P F + A + Y Q D+ E +LD +HE++
Sbjct: 269 LACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENI- 327
Query: 419 RVKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVT 478
KD + + +C H+ F G +S + C C S T
Sbjct: 328 ----------KDDQHKSLAQGHGDCCIAHRV---------FSGILRSDVTCTHCGFTSTT 368
Query: 479 FDPFMYLSLPL 489
F+P M +SL L
Sbjct: 369 FEPCMDISLDL 379
>Os06g0654000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 944
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 758 EAVNLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRF 817
+A +L CLD F E L D+ + C C+++ +A K+L +++ P IL + LKRF RF
Sbjct: 239 DADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRF 298
Query: 818 MKNKLDTFVNFPIHDLDMSRYANHSRG-DQPPIYELYAVINHYGGMGG---GHYSAYAKL 873
KL+ V FP+ LD++ Y + + G DQ Y+LYAV+ H + GHY Y K
Sbjct: 299 --GKLNKRVTFPMK-LDLTPYMSSTDGSDQ---YDLYAVVVHLDMLNASFFGHYICYIKN 352
Query: 874 VEEDSWYHFDDSHVSSVGEEDIRTSSAYLLFYRR 907
WY DD V +V EE++ AY+L Y R
Sbjct: 353 Y-RGRWYKIDDCKVMAVDEEEVHAQGAYMLLYSR 385
>Os02g0244300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 975
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 766 LDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTF 825
L F E L ++M+ C RC+ + +A K+L + +P IL V LKRF ++ K++
Sbjct: 607 LTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKY--GKINKC 664
Query: 826 VNFPIHDLDMSRYANHSRGDQPPIYELYAVINHY---GGMGGGHYSAYAKLVEEDSWYHF 882
V FP LDM + + GD PP+Y LYAV+ H GHY +Y K + + +W
Sbjct: 665 VTFP-DMLDMVPFVTGA-GDNPPLYFLYAVVVHVDTENASFSGHYISYVKDM-QGTWLRI 721
Query: 883 DDSHVSSVGEEDIRTSSAYLLFYRR 907
DDS V +V + + AY+LFY R
Sbjct: 722 DDSEVQAVSLNQVMSEGAYMLFYMR 746
>Os09g0464400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 918
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Query: 766 LDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMK-NKLDT 824
L F E L D+ + C RC +++A KKL + P IL + LKR+ F K NK
Sbjct: 560 LHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGNFGKINKAVR 619
Query: 825 FVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGG---GHYSAYAKLVEEDSWYH 881
F + L++S Y + + D P+Y+LYAV+ H+ M GHY Y K + W+
Sbjct: 620 FTEY----LNLSNYMS-TADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDT-QGKWHK 673
Query: 882 FDDSHVSSVGEEDIRTSSAYLLFYRR 907
DDS V V E + + AY+LFY R
Sbjct: 674 MDDSQVKPVSLEKVLSKCAYMLFYAR 699
>Os04g0452400 Similar to Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 4) (AtUBP4)
Length = 367
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 764 SCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMK--NK 821
SCL F E L +D ++C +C ++A K++ + + P ILV+HLKRF Y + K
Sbjct: 212 SCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIEQLGRYKK 271
Query: 822 LDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYG-GMGGGHYSAYAKLVEEDSWY 880
L V FP+ +L +S + D Y L+AV+ H G G GHY + K + W
Sbjct: 272 LSYRVVFPM-ELKLS-----TSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVK--SHNHWL 323
Query: 881 HFDDSHVSSVGEEDIR------------TSSAYLLFYRRVGSSS 912
FDD +V V E ++ T Y+LFY +G S
Sbjct: 324 FFDDENVEMVEESTLQTFFGSSHEYSGNTDHGYILFYEGLGGKS 367
>Os12g0536600
Length = 98
Score = 80.1 bits (196), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 782 YCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDT-FVNFPI 830
YCP C +H+QA KKLDLWRLPE+LV+HLKRFSY++F +NKL+T F N I
Sbjct: 17 YCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETIFFNVLI 66
>Os06g0184300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 899
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 758 EAVNLFSCLDAFLKDEPL-GPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSR 816
+A +L L F +E L G + + C RC + A KK + + P +L +HLKRFS
Sbjct: 215 KATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFN 274
Query: 817 FMKNKLDTFVNF-PIHDLDMSRYANHSRGDQPPIYELYAVINHYG-GMGGGHYSAYAKLV 874
+ K+D V+F P+ LD+ + + S+G Y LY V+ H G GHY + +
Sbjct: 275 -PREKIDKKVDFQPM--LDLKPFISDSKGADFK-YSLYGVLVHAGWNTQSGHYYCFVR-T 329
Query: 875 EEDSWYHFDDSHVSSVGEEDIRTSSAYLLFYRR 907
W++ DD+ V V E D+ AY+LFY R
Sbjct: 330 SSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 362
>Os09g0505100 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1055
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 308 HG--LSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGELATAFGE 365
HG + GL NLGNTCF N+ +QSL+ L L P G L + +
Sbjct: 220 HGSVIRGLPNLGNTCFFNAVMQSLLALDRLRSKML----------GPDVPTGALLMSLKK 269
Query: 366 LLRKLWSAGRT--SIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKK 423
L + ++ +++P+ + + PQF G+ DS ELL LDGLH + N +K
Sbjct: 270 LFMETSASNDVGGALSPKNLFSNICSKYPQFRGFQMQDSHELLRCFLDGLHTEENEARK- 328
Query: 424 PYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFDPFM 483
LA+E + A +I+ F GQ ST+ +C SV D F+
Sbjct: 329 ---------------LADEASS---ATIPTIVDSIFGGQLSSTVSSTECTHSSVKHDQFL 370
Query: 484 YLSLPLPS 491
LSLP+PS
Sbjct: 371 DLSLPVPS 378
>Os02g0573400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 415
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 757 QEAVNLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSR 816
++ +L SCL +F E L +D ++C +C+ ++A K++ + + P +LV+HLKRF Y
Sbjct: 251 EQNSSLTSCLKSFFSTEILNGEDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFKYVE 310
Query: 817 FMK--NKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGM-GGGHYSAYAKL 873
+ KL V +P+ +L + + D Y L+AV+ H G GHY + K
Sbjct: 311 QLSRHKKLSYRVVYPL-ELKLGSMSE----DADCEYSLFAVVVHVGSSPNHGHYVSQIK- 364
Query: 874 VEEDSWYHFDDSHVSSVGEEDIR-------------TSSAYLLFYRRVGSSS 912
+W FDD V E ++ T Y+LFY R+G S
Sbjct: 365 -SHGNWLSFDDDTVQISEESTLQTFYGSSREHCGGNTDHGYILFYERLGGKS 415
>Os03g0190800 Similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)
(Ubiquitin- specific processing protease 3) (AtUBP3)
Length = 366
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 764 SCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMK--NK 821
SCL F E L +D ++C +C ++A K++ + + P ILV+HLKRF Y + K
Sbjct: 210 SCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYIEQLGRYKK 269
Query: 822 LDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYG-GMGGGHYSAYAKLVEEDSWY 880
L V FP+ +L + ++S + Y L+AV+ H G G GHY + K + W
Sbjct: 270 LSYRVVFPL-ELKLINTVDNSDLE----YSLFAVLVHVGSGPNHGHYISLVK--SHNHWL 322
Query: 881 HFDDSHVSSVGEEDIR------------TSSAYLLFYRRVGSSS 912
FDD +V E ++ T + Y+LFY + S
Sbjct: 323 FFDDENVEMTDESMVQTFFGSAQEFSGNTDNGYILFYESLAEKS 366
>Os05g0510300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 644
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 766 LDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTF 825
L F + E L + + C RC + A K+L + R P++LV+ LKRF K++
Sbjct: 205 LARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRF--EGINGGKINRN 262
Query: 826 VNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYG-GMGGGHYSAYAKLVEEDSWYHFDD 884
+ F L +S + + D P+Y L+ I H G GHY AY K WY +D
Sbjct: 263 IEFK-ETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDA-IGRWYCCND 320
Query: 885 SHVSSVGEEDIRTSSAYLLFY 905
SH+S +D+ + Y+LFY
Sbjct: 321 SHISPSSSQDVLSEKVYILFY 341
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 14/184 (7%)
Query: 313 LHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGELATAFGELLRKLWS 372
L NLGNTC++NS +Q L TPPL + L R N + + F + R++
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLS--FRHSNLCKKVLPNKDKECVFCVVERQISR 82
Query: 373 AGRTSIAPRPFKTKLSR----FAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIEA 428
RT K+ R FA F Q D+ E L +++D H R++K+ + A
Sbjct: 83 LLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKR--LPA 140
Query: 429 KDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFDPFMYLSLP 488
+A+G EE Y ++ + F G S + C CK S D M +SL
Sbjct: 141 SNANGDAGEEEVRVQGPYM------VMKETFGGALLSQVKCLTCKGESNKTDEIMDISLD 194
Query: 489 LPST 492
LP +
Sbjct: 195 LPGS 198
>Os11g0545300 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 500
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 759 AVNLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFS-YSRF 817
A L CLD +++ D + C C ++++ K ++++V L+RF +
Sbjct: 40 AATLEDCLDHIVEENV--HDSLSRCESCMNDQKSTSKCTFHETRDVVIV-LQRFEPLTLG 96
Query: 818 MKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGHYSAYAKLVEED 877
K+ +NFP +LD+S Y + D+ IYEL+ +I H GG+ GGHY +Y K +
Sbjct: 97 GYRKIGELINFPT-ELDISPYMSGVVTDKH-IYELFGIIVHEGGVIGGHYRSYVK---TN 151
Query: 878 SWYHFDDSHVSSVGEEDIRTSSAYLLFYRR 907
WY D V V E + + AY+LFY R
Sbjct: 152 CWYEVSDRDVKRVNENFVLGAQAYILFYNR 181
>Os02g0795000 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family
protein
Length = 1185
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 759 AVNLFSCLDAFLKDEPL-GPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRF 817
A L L F +E L G + + C C + A K+ + + P +L +HLKRFS
Sbjct: 243 AATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFN- 301
Query: 818 MKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYG-GMGGGHYSAYAKLVEE 876
++K+D V F L++ Y ++ G + Y LY V+ H G GHY + +
Sbjct: 302 PRHKIDKKVQFQP-TLNLKPYVSNPEGMEFK-YSLYGVLVHAGWNTQSGHYYCFVR-TSS 358
Query: 877 DSWYHFDDSHVSSVGEEDIRTSSAYLLFYRR 907
W++ DD+ V V E D+ AY+LFY R
Sbjct: 359 GIWHNLDDNKVYQVREADVLRQKAYMLFYVR 389
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 32,973,570
Number of extensions: 1475424
Number of successful extensions: 3462
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 3448
Number of HSP's successfully gapped: 23
Length of query: 931
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 821
Effective length of database: 11,292,261
Effective search space: 9270946281
Effective search space used: 9270946281
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)