Os04g0647300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-specific protease 22.
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Os04g0647300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-specific protease 22.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.12 | 0.286 | 7.65 | 0.635 | 0.601 | -0.0987 | 1.15 | -1.36 | 0.236 | 11.1 | 24.5 | 1047 | -- | -- |
| 38.53 | 0.289 | 7.7 | 0.178 | 0.596 | -0.295 | 0.83 | -- | 0.121 | 11.1 | 20 | 460 | -- | -- |
| 40.11 | 0.297 | 7.67 | 0.52 | 0.534 | -0.0792 | -- | -0.763 | 0.205 | 11.2 | 23.5 | 1573 | -- | -- |
| 41.83 | 0.301 | 7.7 | 0.215 | 0.584 | -0.294 | -- | -- | 0.116 | 11.1 | 20 | 489 | -- | -- |
| 53.25 | 0.342 | 7.7 | 0.413 | -- | -0.338 | -- | -0.75 | 0.119 | -- | 22 | 1624 | -- | -- |
| 41.04 | 0.3 | 7.69 | 0.279 | 0.57 | -- | 0.866 | -- | 0.168 | 11.1 | -- | -- | -- | -- |
| 44.19 | 0.311 | 7.69 | 0.316 | 0.565 | -- | -- | -- | 0.172 | 11.3 | -- | -- | -- | -- |
| 56.58 | 0.35 | 7.71 | 0.207 | -- | -0.34 | -- | -- | 0.0655 | -- | 22.2 | 22 | -- | -- |
| 42.5 | 0.304 | 7.69 | -- | 0.595 | -0.433 | -- | -- | 0.0896 | 11.3 | 19.4 | 1129 | -- | -- |
| 64.2 | 0.374 | 7.7 | 0.301 | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
| 46.81 | 0.32 | 7.69 | -- | 0.562 | -- | -- | -- | 0.137 | 11.3 | -- | -- | -- | -- |
| 57.57 | 0.353 | 7.72 | -- | -- | -0.354 | -- | -- | 0.0691 | -- | 22.2 | 32 | -- | -- |
| 66.6 | 0.381 | 7.71 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 12 |
| 3 | 34.87 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 4 | 34.89 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 11 |
| 13 | 35.07 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 15 | 35.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 8 |
| 22 | 35.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 11 |
| 32 | 35.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 12 |
| 39 | 35.21 | temperature | 25 | 270 | > th | dose independent | rect. | 19 | 13 |
| 143 | 35.59 | temperature | 25 | 1440 | < th | dose independent | sin | 11 | NA |
| 152 | 35.62 | temperature | 25 | 1440 | > th | dose independent | sin | 11 | NA |
| 193 | 35.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 212 | 35.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 214 | 35.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 236 | 35.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 240 | 35.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 284 | 35.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 385 | 36.03 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 12 |
| 429 | 36.09 | temperature | 10 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 449 | 36.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 2 |
| 517 | 36.20 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 19 |
| 685 | 36.41 | temperature | 20 | 10 | > th | dose dependent | sin | 9 | NA |
| 690 | 36.41 | temperature | 10 | 10 | > th | dose dependent | rect. | 12 | 14 |
| 721 | 36.45 | temperature | 20 | 270 | > th | dose dependent | sin | 11 | NA |
| 732 | 36.46 | temperature | 20 | 30 | > th | dose independent | rect. | 12 | 14 |
| 733 | 36.46 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 759 | 36.49 | temperature | 10 | 30 | > th | dose dependent | rect. | 5 | 12 |
| 832 | 36.56 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 17 | 11 |
| 856 | 36.59 | temperature | 20 | 30 | > th | dose independent | rect. | 5 | 21 |
| 904 | 36.64 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 908 | 36.65 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 2 | 10 |
| 953 | 36.68 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 972 | 36.71 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 12 |