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Os11g0667400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15) (Ubiquitin thiolesterase 11) (Ubiquitin-specific processing protease 11) (Deubiquitinating enzyme 11).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.23 | 0.429 | 8.46 | -0.108 | 0.852 | -0.0565 | 0.123 | 4.09 | -0.19 | 3.04 | 7.981 | 5701 | -- | -- |
| 93.14 | 0.453 | 8.61 | -0.988 | 0.643 | -0.778 | 0.127 | -- | -0.39 | 3.27 | 5.361 | 19644 | -- | -- |
| 83.27 | 0.425 | 8.46 | -0.108 | 0.852 | -0.0561 | -- | 4.09 | -0.19 | 3.02 | 7.503 | 5684 | -- | -- |
| 93.19 | 0.453 | 8.61 | -0.99 | 0.642 | -0.782 | -- | -- | -0.39 | 3.23 | 5.361 | 19644 | -- | -- |
| 107.04 | 0.485 | 8.56 | -0.612 | -- | -1.53 | -- | 1.61 | -0.217 | -- | 7.503 | 5684 | -- | -- |
| 98.92 | 0.466 | 8.63 | -1.14 | 0.86 | -- | 0.207 | -- | -0.499 | 3.04 | -- | -- | -- | -- |
| 99.06 | 0.466 | 8.63 | -1.14 | 0.86 | -- | -- | -- | -0.5 | 3 | -- | -- | -- | -- |
| 109.17 | 0.489 | 8.58 | -0.833 | -- | -1.5 | -- | -- | -0.278 | -- | 5.361 | 19644 | -- | -- |
| 104.22 | 0.475 | 8.54 | -- | 0.873 | -0.87 | -- | -- | -0.113 | 2.95 | -1.369 | 47520 | -- | -- |
| 141.49 | 0.556 | 8.63 | -1.11 | -- | -- | -- | -- | -0.478 | -- | -- | -- | -- | -- |
| 133.42 | 0.54 | 8.6 | -- | 0.837 | -- | -- | -- | -0.373 | 2.99 | -- | -- | -- | -- |
| 126.31 | 0.525 | 8.56 | -- | -- | -1.77 | -- | -- | -0.156 | -- | -0.8756 | 47520 | -- | -- |
| 173.71 | 0.615 | 8.6 | -- | -- | -- | -- | -- | -0.355 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 4 | 79.59 | wind | 7 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 5 | 79.61 | wind | 1 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 7 | 79.65 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 9 | 79.67 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 10 | 22 |
| 13 | 79.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 14 | 79.72 | wind | 5 | 43200 | < th | dose independent | rect. | 22 | 17 |
| 15 | 79.73 | wind | 5 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 24 | 79.77 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 21 |
| 30 | 79.81 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 22 | 17 |
| 55 | 79.91 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 57 | 79.91 | wind | 3 | 43200 | > th | dose dependent | rect. | 21 | 6 |
| 59 | 79.92 | atmosphere | 995 | 43200 | < th | dose dependent | no | NA | NA |
| 61 | 79.92 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 79 | 79.95 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 81 | 79.96 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 87 | 79.98 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 90 | 79.99 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 111 | 80.03 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 115 | 80.04 | atmosphere | 995 | 43200 | < th | dose independent | sin | 5 | NA |
| 125 | 80.07 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 127 | 80.08 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 128 | 80.08 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 135 | 80.10 | wind | 5 | 43200 | < th | dose independent | sin | 5 | NA |
| 139 | 80.11 | wind | 5 | 43200 | > th | dose independent | sin | 5 | NA |
| 144 | 80.13 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 164 | 80.17 | wind | 3 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 184 | 80.24 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 186 | 80.24 | wind | 5 | 43200 | > th | dose dependent | rect. | 21 | 17 |
| 188 | 80.27 | wind | 5 | 43200 | > th | dose independent | sin | 10 | NA |
| 198 | 80.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 200 | 80.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 205 | 80.29 | atmosphere | 995 | 43200 | > th | dose independent | sin | 6 | NA |
| 209 | 80.31 | wind | 5 | 43200 | < th | dose independent | sin | 10 | NA |
| 218 | 80.33 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 13 |
| 219 | 80.34 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 222 | 80.35 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 225 | 80.35 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 17 |
| 228 | 80.36 | wind | 5 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 249 | 80.41 | wind | 5 | 43200 | > th | dose dependent | sin | 10 | NA |
| 275 | 80.45 | wind | 5 | 43200 | > th | dose dependent | sin | 5 | NA |
| 289 | 80.48 | wind | 5 | 43200 | > th | dose dependent | rect. | 1 | 13 |
| 295 | 80.49 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 311 | 80.51 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 313 | 80.51 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 319 | 80.53 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 323 | 80.53 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 19 |
| 423 | 80.72 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 447 | 80.76 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 458 | 80.78 | wind | 7 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 485 | 80.80 | wind | 5 | 43200 | < th | dose independent | rect. | 21 | 6 |
| 487 | 80.80 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 507 | 80.84 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 514 | 80.85 | wind | 7 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 557 | 80.89 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 574 | 80.91 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 12 |
| 604 | 80.94 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 4 | NA |
| 635 | 80.98 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 17 | NA |
| 698 | 81.06 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 728 | 81.09 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 739 | 81.10 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 742 | 81.10 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 765 | 81.12 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 828 | 81.18 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 846 | 81.20 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |
| 857 | 81.21 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 881 | 81.22 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 912 | 81.25 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 946 | 81.29 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 9 |
