Os11g0573000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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Os11g0573000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.72 | 0.234 | 11.3 | -0.545 | 0.294 | 0.335 | -0.0395 | 0.0617 | -0.0719 | 11.8 | 19.3 | 4165 | -- | -- |
| 24.72 | 0.232 | 11.3 | -0.567 | 0.293 | 0.34 | -0.04 | -- | -0.0782 | 11.8 | 18.8 | 4147 | -- | -- |
| 24.7 | 0.231 | 11.3 | -0.523 | 0.306 | 0.353 | -- | 0.159 | -0.0682 | 11.7 | 18.3 | 3804 | -- | -- |
| 24.72 | 0.232 | 11.3 | -0.569 | 0.304 | 0.355 | -- | -- | -0.0802 | 11.7 | 18.3 | 3804 | -- | -- |
| 27.88 | 0.247 | 11.3 | -0.493 | -- | 0.44 | -- | 0.0819 | -0.0763 | -- | 18.7 | 4546 | -- | -- |
| 27.49 | 0.246 | 11.3 | -0.408 | 0.271 | -- | -0.0664 | -- | -0.00612 | 11.6 | -- | -- | -- | -- |
| 27.51 | 0.246 | 11.3 | -0.41 | 0.272 | -- | -- | -- | -0.00633 | 11.6 | -- | -- | -- | -- |
| 27.89 | 0.247 | 11.3 | -0.507 | -- | 0.443 | -- | -- | -0.0802 | -- | 18.7 | 4546 | -- | -- |
| 31.4 | 0.261 | 11.3 | -- | 0.293 | 0.135 | -- | -- | 0.0148 | 11.6 | 21.2 | 2126 | -- | -- |
| 32.14 | 0.265 | 11.3 | -0.418 | -- | -- | -- | -- | -0.00942 | -- | -- | -- | -- | -- |
| 31.95 | 0.264 | 11.3 | -- | 0.276 | -- | -- | -- | 0.0394 | 11.7 | -- | -- | -- | -- |
| 34.34 | 0.274 | 11.3 | -- | -- | 0.31 | -- | -- | -0.00543 | -- | 21.2 | 2126 | -- | -- |
| 36.75 | 0.283 | 11.3 | -- | -- | -- | -- | -- | 0.037 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.25 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 3 | 23.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 22 | 23.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 32 | 23.83 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 3 |
| 54 | 23.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 55 | 23.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 62 | 23.95 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 7 |
| 70 | 23.98 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 76 | 23.99 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 5 |
| 86 | 24.02 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 9 |
| 96 | 24.04 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 2 |
| 114 | 24.07 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 11 |
| 132 | 24.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 147 | 24.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 161 | 24.15 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 208 | 24.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 214 | 24.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 5 |
| 303 | 24.34 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 347 | 24.38 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 370 | 24.40 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 383 | 24.42 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 4 |
| 409 | 24.45 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 434 | 24.47 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 435 | 24.47 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 437 | 24.47 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 447 | 24.48 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 460 | 24.50 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 1 |
| 461 | 24.50 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 484 | 24.52 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 500 | 24.53 | temperature | 30 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 501 | 24.53 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 515 | 24.54 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 516 | 24.54 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 545 | 24.56 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 569 | 24.57 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 582 | 24.58 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 618 | 24.59 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 628 | 24.60 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 672 | 24.61 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 701 | 24.62 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 717 | 24.62 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 723 | 24.62 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 728 | 24.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 6 |
| 737 | 24.63 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 750 | 24.63 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 753 | 24.63 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 762 | 24.63 | wind | 1 | 1440 | < th | dose dependent | rect. | 2 | 6 |
| 823 | 24.65 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 836 | 24.65 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 876 | 24.66 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 20 |
| 895 | 24.66 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 4 |
| 943 | 24.67 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 944 | 24.67 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 949 | 24.67 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 950 | 24.67 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 976 | 24.67 | temperature | 25 | 10 | > th | dose dependent | rect. | 18 | 13 |
| 993 | 24.68 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 19 |