BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0101700 Os03g0101700|AK066228
(842 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0101700 Similar to SNF2P 1721 0.0
Os01g0367900 Similar to Possible global transcription activ... 340 4e-93
Os05g0150300 Similar to Possible global transcription activ... 338 1e-92
Os05g0144300 DEAD/DEAH box helicase, N-terminal domain cont... 325 1e-88
Os07g0497000 Similar to Mi-2 autoantigen-like protein (Heli... 323 5e-88
Os06g0183800 Similar to Chromatin remodeling factor CHD3 (G... 310 2e-84
Os01g0881000 Zinc finger, FYVE/PHD-type domain containing p... 253 3e-67
Os01g0102800 DEAD/DEAH box helicase, N-terminal domain cont... 214 3e-55
AK111184 173 4e-43
Os02g0689800 DEAD/DEAH box helicase domain containing protein 159 1e-38
Os04g0566100 Similar to Transcriptional activator SRCAP 138 1e-32
Os02g0762800 DEAD/DEAH box helicase, N-terminal domain cont... 133 7e-31
Os07g0660200 Similar to Chromodomain-helicase-DNA-binding p... 127 4e-29
Os05g0247900 DEAD/DEAH box helicase, N-terminal domain cont... 98 3e-20
Os05g0392400 SNF2-related domain containing protein 96 2e-19
Os02g0650800 93 1e-18
Os07g0636200 DEAD/DEAH box helicase, N-terminal domain cont... 90 6e-18
Os01g0779400 SWAP/Surp domain containing protein 88 3e-17
Os07g0642400 DEAD/DEAH box helicase, N-terminal domain cont... 86 9e-17
Os02g0527100 DEAD/DEAH box helicase, N-terminal domain cont... 86 9e-17
Os10g0457700 Zinc finger, FYVE/PHD-type domain containing p... 85 2e-16
Os01g0636700 RNA-binding region RNP-1 (RNA recognition moti... 84 6e-16
Os08g0180300 DEAD/DEAH box helicase, N-terminal domain cont... 83 7e-16
Os04g0629300 DEAD/DEAH box helicase, N-terminal domain cont... 82 1e-15
Os04g0177300 DEAD/DEAH box helicase, N-terminal domain cont... 82 2e-15
Os07g0511500 SNF2-related domain containing protein 79 1e-14
AK110250 78 3e-14
Os03g0165266 DEAD/DEAH box helicase, N-terminal domain cont... 74 6e-13
>Os03g0101700 Similar to SNF2P
Length = 842
Score = 1721 bits (4456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/842 (98%), Positives = 829/842 (98%)
Query: 1 MSCDCCFFLCRTDHGQMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNK 60
MSCDCCFFLCRTDHGQMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNK
Sbjct: 1 MSCDCCFFLCRTDHGQMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNK 60
Query: 61 FCPSLRVIQYVGDKLHRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLS 120
FCPSLRVIQYVGDKLHRRDLRRMMFQDVQK TELPFDVMMTTYDIALMDQEFLS
Sbjct: 61 FCPSLRVIQYVGDKLHRRDLRRMMFQDVQKSSSSSHSTELPFDVMMTTYDIALMDQEFLS 120
Query: 121 QIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPS 180
QIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPS
Sbjct: 121 QIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPS 180
Query: 181 IFGTLDQFLSTFKQSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPS 240
IFGTLDQFLSTFKQSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPS
Sbjct: 181 IFGTLDQFLSTFKQSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPS 240
Query: 241 LTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFS 300
LTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFS
Sbjct: 241 LTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFS 300
Query: 301 GIEPEPYVEGEHLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYT 360
GIEPEPYVEGEHLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYT
Sbjct: 301 GIEPEPYVEGEHLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYT 360
Query: 361 YERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVI 420
YERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVI
Sbjct: 361 YERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVI 420
Query: 421 FYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEE 480
FYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEE
Sbjct: 421 FYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEE 480
Query: 481 DATYGKGKYVENEASDMRSIIFGLHLFDTSDTTAETMNDDTASETIKEETMLKLKSMSEK 540
DATYGKGKYVENEASDMRSIIFGLHLFDTSDTTAETMNDDTASETIKEETMLKLKSMSEK
Sbjct: 481 DATYGKGKYVENEASDMRSIIFGLHLFDTSDTTAETMNDDTASETIKEETMLKLKSMSEK 540
Query: 541 VVLMRSHEPSEKDERAFEINPNMTDNSGAVVTRVSDSVNVDPDFNEAAYLSWLEKFKESS 600
VVLMRSHEPSEKDERAFEINPNMTDNSGAVVTRVSDSVNVDPDFNEAAYLSWLEKFKESS
Sbjct: 541 VVLMRSHEPSEKDERAFEINPNMTDNSGAVVTRVSDSVNVDPDFNEAAYLSWLEKFKESS 600
Query: 601 HSKENTRAELERQRIAPEEKFLKREAIKKKVEEKRLAKWESLGYQTLKIKDPDILPNQNI 660
HSKENTRAELERQRIAPEEKFLKREAIKKKVEEKRLAKWESLGYQTLKIKDPDILPNQNI
Sbjct: 601 HSKENTRAELERQRIAPEEKFLKREAIKKKVEEKRLAKWESLGYQTLKIKDPDILPNQNI 660
Query: 661 PDSGSVQLVYGDCTNPSVVCPAKPAIIFSCVDNSGTWGHGGMFDALANLSTCIPDAYNRA 720
PDSGSVQLVYGDCTNPSVVCPAKPAIIFSCVDNSGTWGHGGMFDALANLSTCIPDAYNRA
Sbjct: 661 PDSGSVQLVYGDCTNPSVVCPAKPAIIFSCVDNSGTWGHGGMFDALANLSTCIPDAYNRA 720
Query: 721 SEFDDLHLADLHLIQLDEAKCNRSLDAPLWVALAVVQSYNPRRKVPRSEISIPDLELCLS 780
SEFDDLHLADLHLIQLDEAKCNRSLDAPLWVALAVVQSYNPRRKVPRSEISIPDLELCLS
Sbjct: 721 SEFDDLHLADLHLIQLDEAKCNRSLDAPLWVALAVVQSYNPRRKVPRSEISIPDLELCLS 780
Query: 781 RVAFSAAQHSASIHMPRIGLQXXXXXXSQRSEWYTIERLLRKYSSLHGVDIFVYYYRRGN 840
RVAFSAAQHSASIHMPRIGLQ SQRSEWYTIERLLRKYSSLHGVDIFVYYYRRGN
Sbjct: 781 RVAFSAAQHSASIHMPRIGLQGGGGGGSQRSEWYTIERLLRKYSSLHGVDIFVYYYRRGN 840
Query: 841 KH 842
KH
Sbjct: 841 KH 842
>Os01g0367900 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1107
Score = 340 bits (871), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/563 (37%), Positives = 322/563 (57%), Gaps = 53/563 (9%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
+MGLGKTLQ ISLL YL GP +V+ P S W+ E +FCP LR ++++G+
Sbjct: 257 EMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPE 316
Query: 76 HRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRL 135
R +R + Q + FDV +T++++A+ ++ L + W Y++IDEA R+
Sbjct: 317 ERNHIRENLLQPGK------------FDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRI 364
Query: 136 KNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQS 195
KN +S+L + + + RLL+TGTP+QNNL ELW+L++F +P IF + + F F+ S
Sbjct: 365 KNENSLLSKTM-RIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQIS 423
Query: 196 GDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQK 255
G+ N + + L VLR F+LRR K+ ++ G LP E + V ++ +QK
Sbjct: 424 GE-------NDQQEVVQQLHKVLRPFLLRRLKSD-VEKG---LPPKKETILKVGMSQMQK 472
Query: 256 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEP-EPYVEGEHLV 314
+ Y ++L+K+L+ + GG + L NI +QLRK +HPYLF G EP PY GEHLV
Sbjct: 473 QYYRALLQKDLEVI--NAGG--ERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 528
Query: 315 QASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERF 374
+ +GK+V+LD +L KL + RVL+F+QMT+ LDIL+D+L R Y Y R+DG+ E+R
Sbjct: 529 ENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588
Query: 375 AAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 434
A+I++F+ +P S FVF++STRAGG+G+NL AD V+ Y+ DWNPQAD QA
Sbjct: 589 ASIEAFN-KPG---------SEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQA 638
Query: 435 LQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKGKYVENEA 494
RAHRIGQ V ++ TIEE ++ RA +KL L VI + + K V N+
Sbjct: 639 QDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVI--QQGRLAEQKTV-NKD 695
Query: 495 SDMRSIIFGLHL-FDTSDTTAETMNDD---TASETIKEETMLKLKSMSEKVVLMRSHEPS 550
++ + FG + F + D+T + D E E K+K +E + + + +
Sbjct: 696 DLLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAELDAKMKKFTEDAIKFKMDDTA 755
Query: 551 E-------KDERAFEINPNMTDN 566
E K+E + ++DN
Sbjct: 756 ELYDFDDDKEENKLDFKKLVSDN 778
>Os05g0150300 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1158
Score = 338 bits (867), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 213/569 (37%), Positives = 323/569 (56%), Gaps = 65/569 (11%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
+MGLGKTLQ ISLL YL GP +V+ P S W+ E +FCP LR I+++G+
Sbjct: 311 EMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPE 370
Query: 76 HRRDLRRMMFQDVQKXXXXXXXTELP--FDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQ 133
R +R + +P FDV +T++++A+ ++ L + W Y++IDEA
Sbjct: 371 ERNHIRENLL--------------VPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAH 416
Query: 134 RLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFK 193
R+KN +S+L + + + RLL+TGTP+QNNL ELW+L++F +P IF + + F F+
Sbjct: 417 RIKNENSLLSKTM-RIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQ 475
Query: 194 QSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPL 253
SG+ N + + L VLR F+LRR K+ ++ G LP E + V ++ +
Sbjct: 476 ISGE-------NDQHEVVQQLHKVLRPFLLRRLKSD-VEKG---LPPKKETILKVGMSEM 524
Query: 254 QKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEP-EPYVEGEH 312
QK+ Y ++L+K+L+ + GG + L NI +QLRK +HPYLF G EP PY G+H
Sbjct: 525 QKQYYRALLQKDLEVV--NAGG--ERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDH 580
Query: 313 LVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEE 372
L++ +GK+V+LD +L KL E RVL+F+QMT+ LDIL+D+L + Y Y R+DG+ E+
Sbjct: 581 LIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGED 640
Query: 373 RFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADK 432
R A+I++F+ +P S FVF++STRAGG+G+NL AD VI Y+ DWNPQ D
Sbjct: 641 RDASIEAFN-KPG---------SEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDL 690
Query: 433 QALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKGKYVEN 492
QA RAHRIGQ V ++ TIEE ++ RA +KL L VI + G+ E
Sbjct: 691 QAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQ-------GRLAEQ 743
Query: 493 EASD----MRSIIFGLHL-FDTSDTTAETMNDDTASETIKEETM---LKLKSMSEKVVLM 544
+A + ++ + FG + F + D+T + D +E T K+K +E +
Sbjct: 744 KAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAQLDAKMKKFTEDAIKF 803
Query: 545 RSHEPSE-------KDERAFEINPNMTDN 566
+ + +E KDE + +TDN
Sbjct: 804 KMDDTAELYDFDDDKDENKLDFKKLVTDN 832
>Os05g0144300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1128
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/466 (40%), Positives = 274/466 (58%), Gaps = 40/466 (8%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
+MGLGKT+Q I+L++YL GP L++ P +V W +EF + PS+ I Y G
Sbjct: 467 EMGLGKTIQTIALIAYLLEKKEVTGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPD 526
Query: 76 HRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRL 135
R+ LR F Q F+V++T YD+ L D +FL ++ WHY+++DE RL
Sbjct: 527 DRKALREKNFGQRQ------------FNVLLTHYDLILKDLKFLKKVHWHYLIVDEGHRL 574
Query: 136 KNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQS 195
KN L L R+ + RRLLLTGTPIQN+L ELW+L++F +P+IF + F F
Sbjct: 575 KNHECALARTLVSRYQIRRRLLLTGTPIQNSLQELWSLLNFILPNIFNSSQNFEEWF--- 631
Query: 196 GDSLTGGETNKTDKQFKILKH----VLRAFMLRRTKALLIQSGILALPSLTELTVMVPLT 251
++ E + D++ ++ H VLR F+LRR K + + LP T++ + ++
Sbjct: 632 -NAPFACEVSLNDEEQLLIIHRLHQVLRPFLLRRKKDEVEK----YLPVKTQVILKCDMS 686
Query: 252 PLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGE 311
QK Y V ++ GL + ++LQN+ +QLRK +HPYLF +E + +
Sbjct: 687 AWQKAYYEQVTS---NGRVSLGSGL-KSKALQNLSMQLRKCCNHPYLF--VEHYNMYQRQ 740
Query: 312 HLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAE 371
+V++SGK +LD +L KL GHRVLLF+QMT+ LDIL+ +L++ Q+ Y RLDGS + E
Sbjct: 741 EIVRSSGKFELLDRLLPKLQRAGHRVLLFSQMTKLLDILEVYLQMYQFKYMRLDGSTKTE 800
Query: 372 ERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQAD 431
ER + F+ + S F+F++STRAGG+GLNL ADTVI ++ DWNPQ D
Sbjct: 801 ERGRLLADFNKK----------DSEYFLFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMD 850
Query: 432 KQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVI 477
+QA RAHRIGQ N V LVS +IEE I+ RA++K+ + VI
Sbjct: 851 QQAEDRAHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKMGIDAKVI 896
>Os07g0497000 Similar to Mi-2 autoantigen-like protein (Helicase-like protein)
Length = 622
Score = 323 bits (827), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 200/526 (38%), Positives = 297/526 (56%), Gaps = 43/526 (8%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
+MGLGKT+ A + LS L P LVL PLS W++EF + P L V++Y G
Sbjct: 1 EMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSAR 60
Query: 76 HRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRL 135
R +R+ + + F+V++TTY++ L+D +L + W +++DE RL
Sbjct: 61 ARSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRL 120
Query: 136 KNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQS 195
KN SS L+++L R+LLTGTP+QNN+ E++ L++F P+ F +L ++F++
Sbjct: 121 KNSSSKLFSLLNT-LSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSL----ASFEEK 175
Query: 196 GDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQK 255
+ LT T ++ + LK+++ MLRR K +Q+ +P TE V V LT +Q
Sbjct: 176 FNDLT------TTEKVEELKNLVAPHMLRRLKKDAMQN----IPPKTERMVPVELTSIQA 225
Query: 256 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPE---PYVEGEH 312
+ Y ++L K Q L G HQSL NIV+QLRK +HPYL G EPE P E
Sbjct: 226 EYYRAMLTKNYQVLRNIGKG-GAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEM 284
Query: 313 LVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFL--ELRQYTYERLDGSVRA 370
++AS KL +L +LK LH+ GHRVL+F+QMT+ LDIL+D+L E T+ER+DGSV
Sbjct: 285 RIKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSV 344
Query: 371 EERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQA 430
ER AAI F+ ++ FVF++STR+ G+G+NL ADTVI Y+ D+NP A
Sbjct: 345 AERQAAIARFNQDKSR-----------FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 393
Query: 431 DKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKGKYV 490
D QA+ RAHRIGQ N +L LV + ++EE I+ A++KL L + + ++
Sbjct: 394 DIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSES-------- 445
Query: 491 ENEASDMRSIIFGL-HLFDTSDTTAETMNDDTASETIKEETMLKLK 535
+ E D+ I +G LF SD + N+ + ++ E K K
Sbjct: 446 QKEVEDI--IRWGTEELFRNSDVAVKDNNEASGAKNDVAEVEFKHK 489
>Os06g0183800 Similar to Chromatin remodeling factor CHD3 (GYMNOS/PICKLE)
Length = 1335
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/479 (37%), Positives = 270/479 (56%), Gaps = 48/479 (10%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
+MGLGKT+Q+I+ L L + + GP LV+ PLS W EF + P + V+ Y G
Sbjct: 287 EMGLGKTIQSIAFLGSLFVDKL--GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAA 344
Query: 76 HRRDLRRMMF------------QDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLSQIP 123
R +R+ F + + + FDV++T+Y++ MD L I
Sbjct: 345 SREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLKTIE 404
Query: 124 WHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFG 183
W +++DE RLKN S L+ L++ + R+LLTGTP+QNNL EL+ LMHF FG
Sbjct: 405 WECMIVDEGHRLKNKDSKLFGQLKE-YHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFG 463
Query: 184 TLDQFLSTFKQSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTE 243
++ FK + N+ DKQ + L +L+ +LRR K +++ LP E
Sbjct: 464 SIADLQEEFK---------DINQ-DKQVEKLHGMLKPHLLRRFKKDVMKE----LPPKKE 509
Query: 244 LTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIE 303
L + V LT QK+ Y ++L K + L +GG H SL N+V++LRK H ++ E
Sbjct: 510 LILRVELTSKQKEYYKAILTKNYEVLTRRSGG---HVSLINVVMELRKLCCHAFMTD--E 564
Query: 304 PEPYVEGEH----LVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQY 359
PE E L+++SGK+ +LD ++ KL E GHRVL+++Q LD+L+D+L R++
Sbjct: 565 PEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKW 624
Query: 360 TYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTV 419
+YER+DG + ER I F+++ S F F++STRAGG+G+NL ADTV
Sbjct: 625 SYERIDGKIGGAERQIRIDRFNAK----------NSTRFCFLLSTRAGGLGINLATADTV 674
Query: 420 IFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIG 478
I Y+ DWNP AD QA+ RAHR+GQ + V+ LVS+ TIEE +M+ ++K+ L H V+G
Sbjct: 675 IIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVG 733
>Os01g0881000 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1150
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 258/468 (55%), Gaps = 38/468 (8%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
+MGLGKT+Q + L ++ S++ P L+L P S+ W EF ++ L VI Y GD
Sbjct: 560 EMGLGKTVQVVCFLYHIIKESLTASPALILAPKSILLQWEKEFCQWASDLNVIVYQGD-- 617
Query: 76 HRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRL 135
RD R+ +Q + FD ++T+Y+ +D+ L + W +VIDEA R+
Sbjct: 618 --RDSRKC----IQVHEMYSSDGKPLFDALVTSYEFVQIDKAVLQKFKWSTIVIDEAHRM 671
Query: 136 KNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFG--TLDQFLSTFK 193
K L L +R+ RLLLTGTP+QNN+ EL++L+H+ P F D S
Sbjct: 672 KKLDCNLAACL-KRYCSEFRLLLTGTPLQNNIMELFSLLHYIDPDEFSDPKADGLFSPI- 729
Query: 194 QSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPL 253
+SG LT D++ + ++L+ MLRR K+ ++ ++P + V L
Sbjct: 730 ESGRDLT------MDEKVARIHNILKPRMLRRMKSDVLTD---SMPVKKWVEVPCALADS 780
Query: 254 QKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGE-- 311
Q++LY+++L + L + R SL NI+++LRK +HP G+E +
Sbjct: 781 QRELYINILERNYSKLNSAIRN-GRKLSLNNILMELRKCCNHPV---GLEVGQQATEDVF 836
Query: 312 -HLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRA 370
L+ +SGKL +L +L +L E G+RVL+F+QMT+ LDIL+DFL Y Y R+DG
Sbjct: 837 LSLIASSGKLQLLHKLLPRLKERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSL 896
Query: 371 EERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQA 430
R +I+ + + S F+F++STRAGG+G++L GAD VI Y+ D+NP
Sbjct: 897 SARQESIEEYK----------NIDSETFIFLMSTRAGGMGVDLPGADRVIIYDPDFNPFM 946
Query: 431 DKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIG 478
D QA RAHRIGQ V+ L+++ ++EE I++++++KL + + ++
Sbjct: 947 DLQAQSRAHRIGQTRPVVVYQLITKCSVEEKILQKSKQKLAIENMLMN 994
>Os01g0102800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1187
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 159/498 (31%), Positives = 239/498 (47%), Gaps = 70/498 (14%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRV-------- 67
+MGLGKT+Q +S L L + P +V+CP+++ W E +++ P +V
Sbjct: 398 EMGLGKTVQVLSFLGSLHNSGLYK-PSIVVCPVTLLQQWRREASRWYPKFKVEILHDSAN 456
Query: 68 IQYVGDKLHRRDLRRMMFQDVQKXXXXXXXTELPFD------------VMMTTYDIALMD 115
K + Q+ +D +++TTY+ +
Sbjct: 457 SSSKKSKRSSDSDSEASWDSDQEEAVTCSKPAKKWDDLISRVVSSGSGLLLTTYEQLRIL 516
Query: 116 QEFLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMH 175
E L I W Y V+DE R++NP++ + V +Q + R+++TG PIQN LSELW+L
Sbjct: 517 GEKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTV-HRIIMTGAPIQNKLSELWSLFD 575
Query: 176 FCMPSIFGTLDQFLSTFKQSGDSLTGGETNKTDKQFK-------ILKHVLRAFMLRRTKA 228
F P G L F + F S GG N T Q +L+ ++ ++LRR KA
Sbjct: 576 FVFPGKLGVLPVFEAEF--SVPITVGGYANATPLQVSTAYRCAVVLRDLVMPYLLRRMKA 633
Query: 229 LLIQSGILALPSLTELTVMVPLTPLQKKLYLSVL-RKELQTLLTFTGGLSRHQSLQNIVI 287
+ LP TE + LT Q+ Y + L E++ + F G SL I +
Sbjct: 634 DVNAQ----LPKKTEHVLFCSLTTEQRATYRAFLASSEVEQI--FDGN---RNSLYGIDV 684
Query: 288 QLRKASSHPYLFSGIEPEPYVEGEHLVQA--------SGKLVMLDLILKKLHEVGHRVLL 339
LRK +HP L E EH Q SGK+ +++ +LK E GHRVLL
Sbjct: 685 -LRKICNHPDLL---------EREHAAQNPDYGNPERSGKMKVVEQVLKVWKEQGHRVLL 734
Query: 340 FAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFV 399
F Q Q LDI+++FL +Y Y R+DG A++R A I F +N F+
Sbjct: 735 FTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRMALIDEF-----------NNTDEIFI 783
Query: 400 FMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIE 459
F+++T+ GG+G NL GA+ +I Y+ DWNP D QA +RA RIGQ +V L+++ TIE
Sbjct: 784 FILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIE 843
Query: 460 EVIMRRAERKLKLSHSVI 477
E + R K L++ V+
Sbjct: 844 EKVYHRQIYKHFLTNKVL 861
>AK111184
Length = 1028
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 151/527 (28%), Positives = 243/527 (46%), Gaps = 78/527 (14%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPF-------LVLCPLSVTDGWLSEFNKFCPSLRVI 68
+MGLGKTLQ I+L+ L S P +++CPL++ W EF K+ + +
Sbjct: 357 KMGLGKTLQTIALVLTLLKQSCYYTPASCTIERAIIVCPLTLVKNWKREFKKWIGTSALN 416
Query: 69 QYVGDKLHRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLSQIPWHYVV 128
D+ QDV + + V++ Y+ ++ P +V
Sbjct: 417 VLCIDEGR-------GCQDVARFVRSKS-----YHVLVIGYEKLRTCKDLFKDAPVGLIV 464
Query: 129 IDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQF 188
DE RLK+ + + ++ R+++L+GTPIQN+LSE +A++ F P G L+ +
Sbjct: 465 CDEGHRLKSKEAKTTQMFDE-LSAERKIILSGTPIQNDLSEFFAMIDFVAP---GMLNSY 520
Query: 189 LSTFKQSGDSLTGGETNKTDKQFKI--------LKHVLRAFMLRRTKALLIQSGILALPS 240
S K S + + K K L + +LRRT +L LP
Sbjct: 521 ASFKKISEEPIMRSRAQHCSKHTKATGQARASALMTITNDIILRRTADILSN----FLPP 576
Query: 241 LTELTVMVPLTPLQKKLYLSVL-RKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLF 299
E+ + +P Q ++Y S+L ++++LL G L I + LRK + P L
Sbjct: 577 KKEMVLFCSPSPEQIRIYQSILASNDVRSLLRGDAG----NGLLQIGV-LRKLCNTPELL 631
Query: 300 ---------SGIE----------PEPYVEGEHLVQASGKLVMLDLILKKLH-EVGHRVLL 339
S I+ P +V + + SGKLV + +L+KL E +V+L
Sbjct: 632 LRDSEADGTSAIKALVGDMARYFPPNFVRND--ARFSGKLVCVMQLLEKLRAETDDKVVL 689
Query: 340 FAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFV 399
+ T TLDI++ + ++Y+Y RLDG +ER + F+ D +FV
Sbjct: 690 VSNFTSTLDIVEAMMRKKRYSYLRLDGKTPQDERMDMVNQFNR---------DGVDSSFV 740
Query: 400 FMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIE 459
F++S ++GGVGLNLIGA+ ++ + DWNP D QA+ R HR GQ L+ T++
Sbjct: 741 FLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKVCYIYRLLLSGTMD 800
Query: 460 EVIMRRAERKLKLSHSVIGEEDATYGKGKYVENEASDMRSIIFGLHL 506
E I +R KL L+ S+I + ++ + + E D IF LHL
Sbjct: 801 EKIYQRQISKLGLTDSLIKGDKSS--SDTFSQEELRD----IFTLHL 841
>Os02g0689800 DEAD/DEAH box helicase domain containing protein
Length = 1059
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 116/186 (62%), Gaps = 17/186 (9%)
Query: 298 LFSGIEP-----EPYVEGEHLVQ-ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQ 351
+FS I P + Y L+Q GKL L ++L++L GHR L+F QMT+ LDIL+
Sbjct: 68 VFSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILE 127
Query: 352 DFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGL 411
+F+ L YTY RLDGS + EER ++ F++ P F+F++STR+GGVG+
Sbjct: 128 EFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPK-----------FFLFILSTRSGGVGI 176
Query: 412 NLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLK 471
NL+GADTVIFY+ DWNP D+QA R HRIGQ V L+S+ TIEE I+++A +K
Sbjct: 177 NLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRA 236
Query: 472 LSHSVI 477
L VI
Sbjct: 237 LDDLVI 242
>Os04g0566100 Similar to Transcriptional activator SRCAP
Length = 914
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 188/433 (43%), Gaps = 96/433 (22%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQY--VGD 73
+MGLGKT+QA++ L+ L+ PGP L++CP SV + W E K+CPS +I + G
Sbjct: 352 EMGLGKTVQAVTYLTLLRHLYNDPGPHLIVCPASVLENWERELKKWCPSFSIIMFHGAGR 411
Query: 74 KLHRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDI-------ALMDQEFLSQIPWHY 126
+ ++L + PF+V++ Y + D++ L + W
Sbjct: 412 TAYSKELSSL----------GKAGYPPPFNVLLVCYSLFERRSAQQKDDRKALKRWRWSC 461
Query: 127 VVIDEAQRLKNPSSVLY-NVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTL 185
V++DEA LK+ S + N++ +RL+LTGTP+QN+L ELW+L+ F MP IF T
Sbjct: 462 VLMDEAHVLKDKGSFRWRNLMAVAQHARQRLMLTGTPLQNDLHELWSLLEFMMPDIFATG 521
Query: 186 DQFLSTFKQSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELT 245
D L + D + +K +L F+LRR K+ ++Q +P + +
Sbjct: 522 DIDLKKLLNAEDH----------ELISRIKSILGPFILRRLKSDVMQQ---LVPKIQHVN 568
Query: 246 VMVPLTPLQKKLYLSVL--------RKELQTLLTFTG---GLSRHQSLQNIVIQLRKASS 294
V + Q + Y + + ++ F+ GL + + N +Q RK ++
Sbjct: 569 -FVTMDSEQFQAYNYAIDEYRGACQARSAKSTSNFSNNVVGLIPKRQISNYFMQFRKIAN 627
Query: 295 HPYLFSGIEPEPYVE--------------------------------------------- 309
HP L I + V+
Sbjct: 628 HPLLIRRIYSDKDVDRIAKLLYPKGAFGFECSLERATQELRKYNDFAIHQLLVSYGDSGT 687
Query: 310 -----GEHLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERL 364
EH++ S K L +L L GHRVL+F+Q T LDIL+ LE+ TY RL
Sbjct: 688 KGALTDEHVL-GSAKCQALAELLPSLANDGHRVLIFSQWTTMLDILEWTLEVIGVTYRRL 746
Query: 365 DGSVRAEERFAAI 377
DG + + AAI
Sbjct: 747 DGGWIGKLKIAAI 759
>Os02g0762800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 879
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 182/442 (41%), Gaps = 71/442 (16%)
Query: 17 MGLGKTLQAISLLSYLKIHSISPGPFL----VLCPLSVTDGWLSEFNKFCPSLRVIQYVG 72
MGLGKTLQ+I+LL L P + V+ P S+ W SE +I+++
Sbjct: 268 MGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESE---------IIKWLK 318
Query: 73 DKLHRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALM-DQEFLSQIPWHYVVIDE 131
++ L DV V++ +Y+ M +F ++ DE
Sbjct: 319 GRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDE 378
Query: 132 AQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLST 191
A RLKN ++ L RR+LL+GTP+QN+L E +++++F P + G F
Sbjct: 379 AHRLKNDQTLTNKALAA-LPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRY 437
Query: 192 FKQ---SGDSLTGG--ETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTV 246
++ G T E N ++ L + F+LRRT ALL LP V
Sbjct: 438 YEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNH----LPPKIVEVV 493
Query: 247 MVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLF------- 299
LT LQ LY + + L G ++ + + L+K +HP L
Sbjct: 494 CCKLTALQTALYNHFIHSKNVKRLISEG--TKQSKVLAYITALKKLCNHPKLIYDTIKSN 551
Query: 300 ----SGIEPEPYVEGEHLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLE 355
SG + L V LD LFAQ+ +
Sbjct: 552 NSGGSGFDDCLRFFPPELFSGRSGFVTLD--------------LFAQLCRE--------- 588
Query: 356 LRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIG 415
R+Y Y RLDG+ +R + F +D FVF++S++AGG GLNL+G
Sbjct: 589 -RRYPYIRLDGATSINKRQKLVNQF----------NDPSRDEFVFLLSSKAGGCGLNLVG 637
Query: 416 ADTVIFYEQDWNPQADKQALQR 437
+ +I ++ DWNP DKQ QR
Sbjct: 638 GNRLILFDPDWNPANDKQVYQR 659
>Os07g0660200 Similar to Chromodomain-helicase-DNA-binding protein, CHD-1-related
Length = 604
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 30/213 (14%)
Query: 343 MTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMI 402
M + LDIL ++L LR + ++RLDGS RA+ R A++ F++ + DD F F++
Sbjct: 1 MVRMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGS-----DD-----FCFLL 50
Query: 403 STRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVI 462
STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V V+ +++EE I
Sbjct: 51 STRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDI 110
Query: 463 MRRAERKLKLSHSVIGEEDATYGKGKYVENEASDMRSIIFGLHLFDTSDTTA-------E 515
+ RA++K+ L H VI + +A +G+ + E+ G +FD ++ +A E
Sbjct: 111 LERAKKKMVLDHLVIQKLNA---EGRLEKKESKK------GGSMFDKNELSAILRFGAEE 161
Query: 516 TMNDDTASETIKEETMLKLKSMSEKVVLMRSHE 548
+D EET KL+SM +L R+ +
Sbjct: 162 LFKEDKTD----EETKKKLESMDIDEILERAEK 190
>Os05g0247900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 856
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 7 FFLCRTDHG-----QMGLGKTLQAISLLSYLK----------IHSISPGPFLVLCPLSVT 51
+ L R +HG MGLGKT+Q I+ LS + + P L+LCP SV
Sbjct: 144 YNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIAPILILCPTSVI 203
Query: 52 DGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDI 111
W +EF ++ V Y G R ++ Q V+ ++++T++D
Sbjct: 204 RNWENEFAEWA-RCSVAVYHGPN------RDLVLQKVETQR---------LEIVITSFDT 247
Query: 112 ALMDQEFLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELW 171
+ + L I W VV+DEA RLKN S LY + +R LTGT +QN + EL+
Sbjct: 248 FRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLE-ITTRKRFGLTGTIMQNKIMELF 306
Query: 172 ALMHFCMPSIFGTLDQFLSTFKQS---GDSLTGGE--TNKTDKQFKILKHVLRAFMLRRT 226
L + +P G + F + + G + E DK+ K L VL F+LRRT
Sbjct: 307 NLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLVSVLSKFLLRRT 366
Query: 227 KALLIQSGILALPSLTELTVMVPLTPLQKKLYLSVLRK-ELQTLLT 271
K I G L L + V ++ +QK++Y +L++ ++Q L+
Sbjct: 367 KEETI--GHLMLGKEDNI-VFCRMSDVQKRVYRRMLQQPDVQILIN 409
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 318 GKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAI 377
GK+ L+ +L G ++LLF+ + LDIL+ FL + Y + R DG+ R I
Sbjct: 520 GKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLI 579
Query: 378 KSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQR 437
F+ P+K V F+ISTRAG +G+NL+ A+ V+ ++ WNP D QA R
Sbjct: 580 DEFNRCPSKQV-----------FLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDR 628
Query: 438 AHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSH-SVIGEEDATYGKG 487
+ R GQ +V L+ ++EE+I R K +LS+ +V G+ + Y +G
Sbjct: 629 SFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFEG 679
>Os05g0392400 SNF2-related domain containing protein
Length = 450
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 176/392 (44%), Gaps = 73/392 (18%)
Query: 127 VVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTL- 185
+V+DE +N SV++ L + +R++L+GTP QNN EL+ ++ P FG +
Sbjct: 31 LVLDEGHTPRNERSVIWKTL-GKVKTEKRIILSGTPFQNNFLELYNILCLVRPR-FGEMF 88
Query: 186 -----------------DQFLSTFKQS-GDSLTGGETNKTDKQFKILKHVLRAFMLRRTK 227
D+F +++ SLT +N TD + ++ +L+ F
Sbjct: 89 LTKTRVGRRHCVSKKQRDKFSDKYEKGVWASLT---SNVTDDNAEKVRSILKPF------ 139
Query: 228 ALLIQSGIL--ALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNI 285
+ I +G + LP L E +++ PLQK S++RK +G H+
Sbjct: 140 -VHIHNGTILRTLPGLRECVIVLKPLPLQK----SIIRKVENV---GSGNNFEHE----Y 187
Query: 286 VIQLRKASSHPYLFSGIE---------PEPYVEGEHLVQASG-KLVMLDLILKKLHEVGH 335
VI L AS+HP L + I +P +E G K + +++ +
Sbjct: 188 VISL--ASTHPSLVNAINMTEEEASLIDKPMLERLRSNPYEGVKTRFVMEVVRLCEALKE 245
Query: 336 RVLLFAQMTQTLDILQDFLELRQYTYE------RLDGSVRAEERFAAIKSFSSQPTKGVV 389
+VL+F+Q Q L+++++ L + + + ++DG + R +I+ F
Sbjct: 246 KVLIFSQFIQPLELIKEHLR-KIFKWREGKEILQMDGKILPRYRQNSIEVF--------- 295
Query: 390 RDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLS 449
++ S A V + STRA G++L GA V+ + WNP +QA+ RA RIGQ V +
Sbjct: 296 -NNPDSDARVLLASTRACCEGISLTGASRVVLLDVVWNPAVGRQAISRAFRIGQKKFVYT 354
Query: 450 INLVSQRTIEEVIMRRAERKLKLSHSVIGEED 481
NL++ T E R K LS V ED
Sbjct: 355 YNLITYGTGEGDKYDRQAEKDHLSKLVFSTED 386
>Os02g0650800
Length = 1439
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 183/402 (45%), Gaps = 73/402 (18%)
Query: 114 MDQEFLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWAL 173
M + L ++P +V+DE +N S+++ VLE+ +R++L+GTP QN+ EL +
Sbjct: 1047 MVRNLLLEMP-DLLVLDEGHTPRNKKSLIWKVLEE-VRTKKRIILSGTPFQNSFLELSNV 1104
Query: 174 MHFCMPSIFGTLDQFLS-TFKQSG-----DSLTGGETNKTDKQFKILKHVLRAFMLRRTK 227
++ P F S +FK+ G SLT N T+K+ ++ +L +
Sbjct: 1105 LYLIRPKF---ARHFASKSFKKIGLEDYWTSLT--LNNITEKKIDEIRQILDPIVHIHNG 1159
Query: 228 ALLIQSGILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVI 287
+L +S LP L E V++ P QK++ + ++ +T G L +
Sbjct: 1160 DILQKS----LPGLRESVVILNPLPHQKEIITA-----MENTVTM-GTL-------DAEY 1202
Query: 288 QLRKASSHPYLFS------------------GIEPEPYVEGEHLVQASGKLVMLDLILKK 329
++ AS HP+L + + P P V K V+ I++
Sbjct: 1203 KISLASIHPFLVTCAKLSEKETSSVDVSLLKSLRPNP------CVGVKTKFVLE--IVRL 1254
Query: 330 LHEVGHRVLLFAQMTQTLDILQDFLELRQYTYER------LDGSVRAEERFAAIKSFSSQ 383
+ RVL+F+Q + L ++ D L + + + + G+V + R A +++F
Sbjct: 1255 CEAMKERVLVFSQYLEPLSLIMDQLS-KMFNWIEGEEILLMSGNVLVQNREALMEAF--- 1310
Query: 384 PTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQ 443
+D +S A V + ST+A G+ LIGA V+ + WNP +QA+ RA+RIGQ
Sbjct: 1311 -------NDMKSNAKVMLASTKACCEGITLIGASRVVLLDVVWNPSVGRQAIGRAYRIGQ 1363
Query: 444 LNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYG 485
V + NL+++ T E+ R +K +S + +E G
Sbjct: 1364 EKIVYTYNLITEGTKEKDKYDRQAKKDHMSKLLFSKEPHAAG 1405
>Os07g0636200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 747
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 217/479 (45%), Gaps = 67/479 (13%)
Query: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKF--CPS---LRVIQY 70
+MGLGKTLQAI++ S L P LV+ P S+ W S + P+ L V+
Sbjct: 279 EMGLGKTLQAIAVASCLH----DAWPVLVISPSSLRLHWASMIQHWLNIPTEDILVVLPQ 334
Query: 71 VGDKLHRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLSQIPWHYVVID 130
G + R+++ + + F+V+ +YD+ ++ L + + V+ D
Sbjct: 335 TGGS--NKAGYRLVYSNTKGDFNLDGV----FNVI--SYDVVPKIKDMLLDLDFKIVIAD 386
Query: 131 EAQRLKNPSS-----VLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTL 185
E+ LKN + L + + +++ +LL+GTP + EL+ + P+++ +
Sbjct: 387 ESHFLKNAQAKRTMHSLPVLQKAKYV----VLLSGTPALSRPIELFTQLQALYPTVYKNV 442
Query: 186 DQFLSTFKQSG-DSLTGGETNKTDKQFKILKHVLRA-FMLRRTKALLIQSGILALPSLTE 243
+++ + + + G L G +N + L ++++A M+RR K + L++
Sbjct: 443 NEYGNRYCKGGFFGLYQGASNHEE-----LHNLMKATVMIRRLKKDV----------LSQ 487
Query: 244 LTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFS-GI 302
L V +++ +L + KE++ + L+ + I+++ S + S
Sbjct: 488 LPVK-----RRQQAFLDLSEKEMRHIRAL------FHELETVKIKIQSCDSQETMDSLKF 536
Query: 303 EPEPYVEGEHLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYE 362
+ + + A K+ + L + E + L+FA L+ + L ++
Sbjct: 537 AQKNLINKIYNDSAEAKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKKKVKCI 596
Query: 363 RLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFY 422
R+DG R + F + +DD ++ ++S +AGGVGL L A TVIF
Sbjct: 597 RIDGQTPVPVRQTLVTDFQN-------KDDIKAA----VLSIKAGGVGLTLTAASTVIFA 645
Query: 423 EQDWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLK-LSHSVIGEE 480
E W P QA RAHRIGQ+++V L++ T++++I + KL+ L + G+E
Sbjct: 646 ELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQE 704
>Os01g0779400 SWAP/Surp domain containing protein
Length = 1213
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 332 EVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRD 391
++ + ++F+Q T+ LD+++ L+ +Y RLDG++ R A+K F++ P
Sbjct: 1056 KITEKAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPE------ 1109
Query: 392 DNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSIN 451
V ++S +A +GLN++ A V+ + WNP + QA+ RAHRIGQ V
Sbjct: 1110 -----VSVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAVDRAHRIGQTRPVTVSR 1164
Query: 452 LVSQRTIEEVIMRRAERKLKLSHSVIGEE 480
L + T+E+ I+ E+K ++ S GE+
Sbjct: 1165 LTIKDTVEDRILALQEKKREMVASAFGED 1193
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 119 LSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFI----MPRRLLLTGTPIQNNLSELWALM 174
L+++ W V++DEAQ +KN Y R RR L+GTPIQN + +L++
Sbjct: 706 LAKVAWFRVILDEAQSIKN-----YRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYF 760
Query: 175 HFCMPSIFGTLDQFLSTFKQ--SGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQ 232
F + +F K S + +TG +K L+ VL+ MLRRTKA ++
Sbjct: 761 RFLRYDPYAEYKKFCFMIKTPISRNPITG---------YKKLQVVLKTVMLRRTKATMLD 811
Query: 233 SG-ILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNI---VIQ 288
I++LP T V T ++ Y ++ + + + + Q+ NI +++
Sbjct: 812 GKPIISLPPKTVSLKTVDFTSEERAFYNTLEAESREQFKEYAAAGTVKQNYVNILLMLLR 871
Query: 289 LRKASSHPYLFSGIE 303
LR+A HP+L G E
Sbjct: 872 LRQACDHPHLVRGHE 886
>Os07g0642400 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 821
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 9/147 (6%)
Query: 336 RVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQS 395
+ ++F+Q + L +L+ L+ + RLDGS+ A++R I+ F G V D+ +
Sbjct: 665 KSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQF------GCVGPDSPT 718
Query: 396 GAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQ 455
V + S +A G G+NL A TV ++ WNP ++QA+ R HRIGQ V + L+ +
Sbjct: 719 ---VLLASLKAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVK 775
Query: 456 RTIEEVIMRRAERKLKLSHSVIGEEDA 482
+IEE ++ ERK KL G +
Sbjct: 776 DSIEERMLELQERKKKLISGAFGRKKG 802
>Os02g0527100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 810
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 317 SGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAA 376
S K+ L L+ L G + ++F+Q T LD+LQ L +++ RLDG++ ++R
Sbjct: 643 SSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQREKV 702
Query: 377 IKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQ 436
IK FS + V ++S +AGGVG+NL A + WNP ++QA+
Sbjct: 703 IKEFSEDKS-----------ILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAIM 751
Query: 437 RAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEED 481
R HRIGQ +V + + T+EE + RK ++ + +++
Sbjct: 752 RIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQRMISGALTDQE 796
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 46/277 (16%)
Query: 40 GPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRMMFQDVQKXXXXXXXTE 99
G L++CP+++ W +E V YV +R ++ Q
Sbjct: 273 GGNLIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRPKEANLIGQS------------ 320
Query: 100 LPFDVMMTTYDIALMDQEF----------LSQIPWHYVVIDEAQRLKNPSSVLYNVLEQR 149
D+++TTY + + EF L I W VV+DEA +K+P S L ++
Sbjct: 321 ---DIVLTTYGV--LSSEFSNENSTESGGLYSIHWFRVVLDEAHMIKSPKS-LISLAAAA 374
Query: 150 FIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLD---QFLSTFKQSGDSLTGGETNK 206
RR LTGTPIQNNL ++++L F + + + + GD
Sbjct: 375 LTADRRWCLTGTPIQNNLEDIYSLFRFLRVEPWRNWSLWHKLVQKPYEEGD--------- 425
Query: 207 TDKQFKILKHVLRAFMLRRTKALLIQSG--ILALPSLTELTVMVPLTPLQKKLYLSVLRK 264
++ K+++ +L+ MLRR K + G IL LP L+ +K Y ++ R+
Sbjct: 426 -ERGLKLVQSILKPIMLRRNKNSTDKEGRPILILPPANIEVKYCDLSETEKDFYDALFRR 484
Query: 265 ELQTLLTFTGG---LSRHQSLQNIVIQLRKASSHPYL 298
F L + S+ ++++LR+ HP+L
Sbjct: 485 SKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFL 521
>Os10g0457700 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1319
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 21/173 (12%)
Query: 317 SGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYT------------YERL 364
SGK+V+L IL E+G + L+F+Q TLD+++ +L Q + R+
Sbjct: 1115 SGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRI 1174
Query: 365 DGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQ 424
DGS + ER ++ F+ P V+ +ISTRAG +G+NL A+ VI +
Sbjct: 1175 DGSTPSSERQNLVERFND-PENIRVK--------CTLISTRAGYIGINLHSANRVILLDG 1225
Query: 425 DWNPQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVI 477
WNP D QA+ R R GQ V + L++ T+EE I +R K L+ V+
Sbjct: 1226 SWNPTHDLQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVV 1278
>Os01g0636700 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 469
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 37/255 (14%)
Query: 17 MGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKLH 76
MGLGKT QA + L+ L +S L++ P ++ W++E K + +I
Sbjct: 234 MGLGKTRQASAFLAGL-FYSDLTQRVLIVAPGTILHQWIAELTKVGFNEDLIHSFWCAKT 292
Query: 77 RRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALMDQEFLSQIP------------W 124
R D + ++ V++ TYD+ + E L+ + W
Sbjct: 293 RHDSLAQVLKE--------------GGVLLITYDLVRLYNEELNGMSSKSSKMRRACPSW 338
Query: 125 HYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGT 184
YV++DE LKNP++ L+ + ++LTGTP+QNNLSE +LM C P++ G+
Sbjct: 339 DYVILDEGHVLKNPNTKNAAALKS-LSRGQTVVLTGTPVQNNLSEFHSLMSLCCPTVLGS 397
Query: 185 LDQFLSTFKQSGDSLTGGETNK-----TDKQFKILKHVLRAFMLRRTKALLIQSGILALP 239
L F F + D E + K+ + ++R + LRRTK I+S LP
Sbjct: 398 LAAFERDFCKPIDMGNVLEATTEVVMISSKKAMEFRKMVRPYFLRRTKE-SIES---LLP 453
Query: 240 SLTELTVMVPLTPLQ 254
+ +L + + LTP Q
Sbjct: 454 NKADLVIWLKLTPYQ 468
>Os08g0180300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1030
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 11/145 (7%)
Query: 336 RVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQS 395
+ ++F+Q T LD+L+ L Y RLDG++ R A+K F++ P VR
Sbjct: 877 KAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSRDKAVKDFNTDPE---VR----- 928
Query: 396 GAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQ 455
V ++S +AG +GLN++ A VI + WNP A+ QA+ RAHRIGQ V L +
Sbjct: 929 ---VMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIK 985
Query: 456 RTIEEVIMRRAERKLKLSHSVIGEE 480
T+E+ I+ E K + S GE+
Sbjct: 986 DTVEDRILALQEEKRAMVSSAFGED 1010
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 21/224 (9%)
Query: 119 LSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCM 178
++++ W VV+DEAQ +KN + + RR L+GTPIQN + EL++ HF
Sbjct: 541 VARVRWFRVVLDEAQTIKNFRTQVAKAC-CGLRAKRRWCLSGTPIQNAIDELYSYFHFLK 599
Query: 179 PSIFGTLDQFLSTFKQ--SGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQS-GI 235
+ T + F + K + +++ G +K L+ VLR +LRRTK LI I
Sbjct: 600 YDPYSTYNSFCTMIKHPIARNAVHG---------YKKLQTVLRIVLLRRTKETLIDGEPI 650
Query: 236 LALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNI---VIQLRKA 292
+ LP T V T ++ YL++ + Q + + Q+ NI +++LR+A
Sbjct: 651 IKLPPKTINLDKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQA 710
Query: 293 SSHPYLFSGIEPEPYVEGEHLVQASGKLV--MLDLILKKLHEVG 334
HP L G + E +G+ ++ + +L M+ +L KL EVG
Sbjct: 711 CDHPLLVKGHQSE--YKGDGSIEMAKQLPKEMIINLLAKL-EVG 751
>Os04g0629300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1051
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 11/145 (7%)
Query: 336 RVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQS 395
+ ++F+Q T LD+L+ L+ + + RLDG++ R AA++ F++ P VR
Sbjct: 898 KAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNTDPE---VR----- 949
Query: 396 GAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQ 455
V ++S +AG +GLN++ A VI + WNP A+ QA+ RAHRIGQ V L +
Sbjct: 950 ---VMLMSLKAGNLGLNMVAACHVIMIDPWWNPYAEDQAVDRAHRIGQTRPVTVSRLTIK 1006
Query: 456 RTIEEVIMRRAERKLKLSHSVIGEE 480
T+E+ I+ E+K K+ S GE+
Sbjct: 1007 DTVEDRILALQEKKRKMVQSAFGED 1031
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 127/317 (40%), Gaps = 54/317 (17%)
Query: 30 SYLKIHSISPGPFLVLCPLSVTDGWLSEFN-KFCPS--LRVIQYVGDKLHRRDLRRMMFQ 86
S L+ + S LV+CP SV W SE K S L V+ Y G +D +
Sbjct: 435 STLRSANRSTAGTLVVCPASVLRQWASELAAKVTESSKLSVLVYHGGS-RTKDPTELTKY 493
Query: 87 DVQKXXXXXXXTELP---FDVMMT-----TYDI--------------------------A 112
DV E+P FD M TY + A
Sbjct: 494 DVVVTTYTIVANEVPKQNFDEDMEEKNSETYGLCPAFSIGNKRKKDSEPKKKKKPKNSDA 553
Query: 113 LMDQEFLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWA 172
+D L+++ W VV+DEAQ +KN ++ + RR L+GTPIQN + +L++
Sbjct: 554 DLDGGPLARVRWFRVVLDEAQTIKNHNTQVARAC-CGLRAKRRWCLSGTPIQNTIDDLYS 612
Query: 173 LMHFCMPSIFGTLDQFLSTFKQ--SGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALL 230
F + F S K S D+ G +K L+ VL+ +LRRTK L
Sbjct: 613 YFRFLKYEPYSVYGSFRSMIKYQISRDATRG---------YKKLQAVLKIVLLRRTKETL 663
Query: 231 IQS-GILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVI-- 287
I I+ LP T + + ++ Y+ + + + + ++ NI++
Sbjct: 664 IDGEPIIKLPPKTIQLSKIDFSKEERTFYMMLEEGSREKFKEYASAGTIRENFANILVLL 723
Query: 288 -QLRKASSHPYLFSGIE 303
+LR+A HP L G E
Sbjct: 724 LRLRQACDHPLLLKGKE 740
>Os04g0177300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 664
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 308 VEGEHLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGS 367
V+ E+ + S K++ L IL+ L E + ++F+Q T D+L+ + + R DG
Sbjct: 488 VDPENNWKDSCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFDGK 547
Query: 368 VRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWN 427
+ + R +K FS K V ++S +AGGVGLNL A V + WN
Sbjct: 548 LSQKHREKVLKEFSESKDK-----------LVLLMSLKAGGVGLNLTAASNVFLMDPWWN 596
Query: 428 PQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMR 464
P ++QA+ R HRIGQ V + + T+EE + +
Sbjct: 597 PAVEEQAIMRIHRIGQKRAVQVRRFIVKDTVEERMQK 633
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 58/332 (17%)
Query: 17 MGLGKTLQAISLL--------------------SYLKIHSISPGPFLVLCPLSVTDGWLS 56
MGLGKT+ I+L+ S G L++CP+++ W
Sbjct: 85 MGLGKTVMTIALILSNPRGELEQDKRGTRDRDTKAQTSRSSVRGGTLIICPMALLGQWKD 144
Query: 57 EFNKFCP--SLRVIQYVGDKLHRRDLRRMMFQDVQKXXXXXXXTELPFDVMMTTYDIALM 114
E +L V Y G DLR M V++TTY +
Sbjct: 145 ELEAHSTPGALSVFVYYGGD-RTTDLRFMA----------------QHSVVLTTYGVLQS 187
Query: 115 DQE-----FLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSE 169
+ +I W+ VV+DEA +K+P + + R LTGTP+QNNL +
Sbjct: 188 AHKNDGSSIFHRIDWYRVVLDEAHTIKSPRTKAARAAYE-LTSHCRWCLTGTPLQNNLED 246
Query: 170 LWALMHFCMPSIFGTLDQFLSTFKQSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKAL 229
L++L+ F +G + ++ + N ++ K+++ +LR MLRRTK
Sbjct: 247 LFSLLCFLHVEPWGDASWWNKLIQRPYE-------NGDERGLKLVRAILRPLMLRRTKET 299
Query: 230 LIQSG--ILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGG---LSRHQSLQN 284
+ G IL LP V + ++ Y ++ R+ F L+ + ++
Sbjct: 300 KDKMGNPILVLPPANIEIVECEQSEDERDFYEALFRRSKVQFDKFVAQGSVLNNYANILE 359
Query: 285 IVIQLRKASSHPYL-FSGIEPEPYVEGEHLVQ 315
++++LR+ HP+L S + + Y + + L Q
Sbjct: 360 LLLRLRQCCDHPFLVISRADTQKYTDLDELAQ 391
>Os07g0511500 SNF2-related domain containing protein
Length = 635
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 11/149 (7%)
Query: 331 HEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVR 390
H+ + ++F+Q T LD+++ L+ +L+G + E+ AI +F++ P
Sbjct: 479 HDGSAKGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAIDTFTNDPD----- 533
Query: 391 DDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSI 450
+F++S +AGGV LNL A V + WNP + QA R HRIGQ + S+
Sbjct: 534 ------CRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSM 587
Query: 451 NLVSQRTIEEVIMRRAERKLKLSHSVIGE 479
V + T+EE I++ E+K + +G+
Sbjct: 588 RFVIKDTVEERILQLQEKKRLVFEGTVGD 616
>AK110250
Length = 1046
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 336 RVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQS 395
+ L+F+Q LD++ L+ + RL+G++ E R IK F P
Sbjct: 895 KSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEARNRTIKHFMENPN---------- 944
Query: 396 GAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQ 455
VF++S +AGGV LNL A V + WNP + QA+ R HR+G+ ++ +V +
Sbjct: 945 -VTVFLVSLKAGGVALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGRHRPIIVKRMVIE 1003
Query: 456 RTIEEVIMRRAERKLKLSHSVIGEEDATYGK 486
+IE I+ +K + + IG++D G+
Sbjct: 1004 NSIESRIIELQNKKSAMIEAAIGKDDGAVGR 1034
>Os03g0165266 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1078
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 209/497 (42%), Gaps = 72/497 (14%)
Query: 18 GLGKTLQAISLL-SYLKIHSISPGPFLVLCPLSVTDGWLSEFNKF-CPSLRVIQYVGDKL 75
G GKT IS + S+L + G L++ P + W +EF + + + + K
Sbjct: 564 GSGKTFLIISFVHSFLAKYP--AGRPLIILPKGILSTWRTEFLHWQVDDIPLYDFYSSKA 621
Query: 76 HRRD--LRRMMFQDVQKXXXXXXXTELPFDVMMTTYDI-ALMDQEFLSQIPWHYVVIDEA 132
+R L+ + + + + V T D A+M QE L ++P V++DE
Sbjct: 622 DKRSEQLKVLNLWEESRSILLLGYQQFACIVSDHTSDTEAIMCQEKLLKVP-SLVILDEG 680
Query: 133 QRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQ----- 187
+N + L LE PR+++L+GT QN++ E++ ++ + S F +D+
Sbjct: 681 HTPRNEETDLLTSLEN-IRTPRKVVLSGTLFQNHVREVFNILKL-VRSKFLKMDKSRAIV 738
Query: 188 --FLSTFKQSGDSLTGGETNKTDKQF-KILKHVLRAFMLRRTKALLIQSGILALPSLTEL 244
LS G S N +DK F +++ L+ + +A++IQ+ L EL
Sbjct: 739 NCILSKVDLMGKSARS--KNISDKDFFDLVQEHLQKDGNDKMRAVIIQN-------LREL 789
Query: 245 TVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQL------------RKA 292
T V Y L EL ++ FT L+ ++I+ L
Sbjct: 790 TADVL------HYYQGKLLDELPGIVDFTVFLNMSSKQEHIIKGLDGINKFAKRSRCNAV 843
Query: 293 SSHPYLFSGIEPEP---YVEGEHLVQASGKLVMLDLILKKL--------HEVGHRVLLFA 341
S HP L + + + V + + + D + K G +VL+F+
Sbjct: 844 SLHPCLKNANKADADDGNVTNRKIGSIISGIDINDGVKAKFVHNLLSLSEATGGKVLVFS 903
Query: 342 QMTQTLDILQDFL-ELRQYTYE----RLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSG 396
Q ++L L+ + ++ + E R+ G ++R A+ F++ P
Sbjct: 904 QYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQREQAVHRFNNSPD----------- 952
Query: 397 AFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQR 456
A VF S +A G G++L+GA ++ + NP +QA+ RA+R GQ V LV+
Sbjct: 953 ARVFFGSIKACGEGISLVGASRIVILDVHENPSVMRQAIGRAYRPGQSKMVYCYRLVAAD 1012
Query: 457 TIEEVIMRRAERKLKLS 473
+ EE A +K ++S
Sbjct: 1013 SPEEDDHHTAFKKERVS 1029
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 26,679,736
Number of extensions: 1081316
Number of successful extensions: 3035
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 2952
Number of HSP's successfully gapped: 35
Length of query: 842
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 733
Effective length of database: 11,344,475
Effective search space: 8315500175
Effective search space used: 8315500175
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)