BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0727700 Os02g0727700|J065162E09
(311 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0727700 Zinc finger, RING-type domain containing protein 478 e-135
Os08g0487500 Zinc finger, RING-type domain containing protein 110 9e-25
Os12g0118700 Zinc finger, RING-type domain containing protein 101 6e-22
Os05g0110000 Zinc finger, RING-type domain containing protein 98 7e-21
Os11g0119200 Zinc finger, RING-type domain containing protein 96 2e-20
Os06g0633500 Zinc finger, RING-type domain containing protein 96 4e-20
Os10g0487400 Zinc finger, RING-type domain containing protein 91 7e-19
Os01g0972000 Zinc finger, RING-type domain containing protein 90 2e-18
Os06g0101300 Zinc finger, RING-type domain containing protein 84 2e-16
Os03g0324900 Zinc finger, RING-type domain containing protein 82 4e-16
Os02g0191500 Similar to Goliath homolog precursor (RING fin... 81 9e-16
Os03g0351800 Zinc finger, RING-type domain containing protein 79 4e-15
Os08g0464400 Zinc finger, RING-type domain containing protein 79 5e-15
Os03g0271600 Zinc finger, RING-type domain containing protein 79 6e-15
Os05g0488800 Zinc finger, RING-type domain containing protein 77 2e-14
Os09g0242800 Zinc finger, RING-type domain containing protein 77 2e-14
Os01g0802000 Zinc finger, RING-type domain containing protein 76 3e-14
Os05g0495000 76 3e-14
Os02g0767600 76 4e-14
Os01g0276600 Zinc finger, RING-type domain containing protein 74 1e-13
Os09g0434200 Zinc finger, RING-type domain containing protein 74 1e-13
Os03g0812200 Zinc finger, RING-type domain containing protein 73 3e-13
Os09g0243200 Zinc finger, RING-type domain containing protein 69 5e-12
Os12g0140700 Zinc finger, RING-type domain containing protein 67 1e-11
Os12g0140233 Zinc finger, RING-type domain containing protein 67 2e-11
Os12g0139100 65 4e-11
Os11g0142800 65 6e-11
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/311 (80%), Positives = 249/311 (80%)
Query: 1 MANDSSSFPRSLLIPLAAXXXXXXXXXXXXXXXXTVSFPSFWPPFPAILSDSDSDVALFX 60
MANDSSSFPRSLLIPLAA TVSFPSFWPPFPAILSDSDSDVALF
Sbjct: 1 MANDSSSFPRSLLIPLAAGGCSDDDDGYDEGPSDTVSFPSFWPPFPAILSDSDSDVALFP 60
Query: 61 XXXXHVDHCPAPQGAASAFFGLGFREEDDHDGGEWAPPGEVELPLCWDCLQLEEPDHQRW 120
HVDHCPAPQGAASAFFGLGFREEDDHDGGEWAPPGEVELPLCWDCLQLEEPDHQRW
Sbjct: 61 PPPPHVDHCPAPQGAASAFFGLGFREEDDHDGGEWAPPGEVELPLCWDCLQLEEPDHQRW 120
Query: 121 DIGVNGGGGDEWEQVGIRVXXXXXXXXXXVRSLEWEVLLATNSLGSLVVDGADYDGGIDT 180
DIGVNGGGGDEWEQVGIRV VRSLEWEVLLATNSLGSLVVDGADYDGGIDT
Sbjct: 121 DIGVNGGGGDEWEQVGIRVEEEEEEAAAAVRSLEWEVLLATNSLGSLVVDGADYDGGIDT 180
Query: 181 FFLDDADDVLFGQLAAEHEPPXXXXXXXXXXXXVESLPTVVVDAARGDTQCAVCKDGMEA 240
FFLDDADDVLFGQLAAEHEPP VESLPTVVVDAARGDTQCAVCKDGMEA
Sbjct: 181 FFLDDADDVLFGQLAAEHEPPAAKGARAAAKAAVESLPTVVVDAARGDTQCAVCKDGMEA 240
Query: 241 GERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEYENWKXXXXXXXXXXXXXX 300
GERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEYENWK
Sbjct: 241 GERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEYENWKARRAAAGGNGDGDR 300
Query: 301 XXXXXQLSMID 311
QLSMID
Sbjct: 301 YGIIRQLSMID 311
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 97/190 (51%), Gaps = 27/190 (14%)
Query: 107 WDCLQLEEPDHQRWDIG------VNGGGGDEWEQVGIRVXXXXXXXXXXVRSLEWEVLLA 160
WDCLQL++ D + + N +WE+V EWEVL
Sbjct: 92 WDCLQLDDDDEEEEGVADLRLEASNAAEEFDWEEVASPSGGAGMDQPEP----EWEVLAD 147
Query: 161 TNSLGSLVVD-GADYDGGIDTFFLDDADDVLFGQ-LAAEHEPPXXXXXXXXXXXXVESLP 218
D G Y D + +VL G+ L + +PP VE+LP
Sbjct: 148 VPPPPPPPADEGFVYTSDRDVY------EVLVGEGLFLKSKPPAARSA-------VEALP 194
Query: 219 TVVVDAARGDT--QCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELP 276
+ VV A +CAVC+DG+ AGER +RLPC+H YH+ CI+PWL +RN+CPLCR ELP
Sbjct: 195 SAVVAAGEDGEGEECAVCRDGVAAGERVKRLPCSHGYHEECIMPWLDVRNSCPLCRFELP 254
Query: 277 TDDPEYENWK 286
TDDP+YE+WK
Sbjct: 255 TDDPQYESWK 264
>Os12g0118700 Zinc finger, RING-type domain containing protein
Length = 499
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 214 VESLPTVVVDAA---RGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPL 270
+E+LP+V++ A+ GD C VCKD + RA++LPC HLYH CILPWL+ RNTCP+
Sbjct: 314 IENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPV 373
Query: 271 CRHELPTDDPEYENWK 286
CR+ELPTDD EYE K
Sbjct: 374 CRYELPTDDAEYERSK 389
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 182 FLDDADDVLFGQLAAEHEPPXXXXXXXXXXXXVESLPTVVVDAAR--GDTQCAVCKDGME 239
LD + G LA E P VES+PTV + A+ D+ CAVCK+ E
Sbjct: 98 LLDQLTQIEAGGLARARENPPASKAS------VESMPTVTIAASHVGADSHCAVCKEPFE 151
Query: 240 AGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTD 278
G+ AR +PC+H+YH CILPWLA+RN+CP+CRHE+PTD
Sbjct: 152 LGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTD 190
>Os11g0119200 Zinc finger, RING-type domain containing protein
Length = 491
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 214 VESLPTVVVDAARG---DTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPL 270
+E+LP+V++ + D C VCKD + RA++LPC HLYH CILPW + RNTCP+
Sbjct: 306 IENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPV 365
Query: 271 CRHELPTDDPEYENWK 286
CR+ELPTDD EYE K
Sbjct: 366 CRYELPTDDAEYERSK 381
>Os06g0633500 Zinc finger, RING-type domain containing protein
Length = 124
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 47/56 (83%)
Query: 231 CAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEYENWK 286
CAVCKDG+ GE A +LPCAHLYH CI PWLAIRN+CP+CR+ELPTDDPEYE +
Sbjct: 50 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCRYELPTDDPEYEKRR 105
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Query: 214 VESLPTVVVD----AARGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCP 269
+ +LP VVV AA +CAVCK+ GE A+++PC H+YH CI+PWL + N+CP
Sbjct: 149 LSTLPDVVVTDAMVAAADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCP 208
Query: 270 LCRHELPTDDPEYENWK 286
+CR ELPTDDP+YE K
Sbjct: 209 ICRFELPTDDPDYEGRK 225
>Os01g0972000 Zinc finger, RING-type domain containing protein
Length = 334
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 214 VESLPTVVVDAAR--GDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLC 271
V+S+PT+++ A D+ CAVCK+ AR +PCAH+YH CILPWLA+ N+CP+C
Sbjct: 112 VDSMPTILIGACHLAADSHCAVCKEPFHLAAEAREMPCAHIYHHNCILPWLALHNSCPVC 171
Query: 272 RHELPTDDPEYEN 284
RH +PTDD + N
Sbjct: 172 RHRMPTDDHDSTN 184
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 181 FFLDDADDVLFGQLAAEHEPPXXXXXXXXXXXXVESLPTVVVDA----ARGDTQCAVCKD 236
+F+ + L QLA P V +LP V V A A G QCAVC D
Sbjct: 150 YFVGSGLEQLIQQLAEND--PNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAVCMD 207
Query: 237 GMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEYEN 284
G A++LPC H++H CILPWL + ++CP+CR ELPTDDP + +
Sbjct: 208 DFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHHAH 255
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 214 VESLPTVVVDAARGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRH 273
V +LPTV V A G T C VC D EAG AR +PC H +HDGCILPWL ++CP+CR+
Sbjct: 196 VAALPTVRVHDAAGAT-CPVCLDEFEAGGEAREMPCKHRFHDGCILPWLEAHSSCPVCRY 254
Query: 274 ELPTDD 279
+LPTDD
Sbjct: 255 QLPTDD 260
>Os02g0191500 Similar to Goliath homolog precursor (RING finger protein 130)
Length = 375
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%)
Query: 214 VESLPTVVVDAARGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRH 273
VESLP + CAVCKD +G+ LPC H +H CI PWL IR TCP+CRH
Sbjct: 258 VESLPEATLSEEEASRGCAVCKDSFASGQIVALLPCKHYFHGDCIWPWLTIRTTCPVCRH 317
Query: 274 ELPTDDPEYEN 284
++ T+D +YE
Sbjct: 318 QVRTEDDDYEQ 328
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 214 VESLPTVVVDAAR--GDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLC 271
++++PTV + GD+ C VCKD E G AR +PC HLYH CI+PWL N+CP+C
Sbjct: 168 IDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVC 227
Query: 272 RHELP 276
R+ELP
Sbjct: 228 RYELP 232
>Os08g0464400 Zinc finger, RING-type domain containing protein
Length = 211
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 217 LPTVVVDAARGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELP 276
LPTV V + T CA+CKD + ARRLPC HLYH CI+ WL +RN+CP+CR LP
Sbjct: 62 LPTVEV--SEPATACAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRSRLP 119
Query: 277 TDDPE 281
+D+P+
Sbjct: 120 SDEPQ 124
>Os03g0271600 Zinc finger, RING-type domain containing protein
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 214 VESLPTVVVDAARGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRH 273
VES+P+V V + CAVC++ E G AR +PC H+YH CILPWL++RN+CP+CR
Sbjct: 120 VESMPSVTVAGS--GAHCAVCQEAFEPGASAREMPCKHVYHQDCILPWLSLRNSCPVCRR 177
Query: 274 EL 275
EL
Sbjct: 178 EL 179
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 175 DGGIDTFFLDDADDVLFGQLAAEHEPPXXXXXXXXXXXXVESLPTVVVDAARGDTQCAVC 234
DG ++ + L +L LA P VE+LPTV ++ C+VC
Sbjct: 148 DGLLEEYVLGAGLSLLLQHLAESD--PSRNGTPPAKKEAVEALPTVKIEEV---VSCSVC 202
Query: 235 KDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDD 279
D +E G +A+++PC H +H CILPWL + ++CP+CR ELP+++
Sbjct: 203 LDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEE 247
>Os09g0242800 Zinc finger, RING-type domain containing protein
Length = 163
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 177 GIDTFFLDDADDVLFGQLAAEHEPPXXXXXXXXXXXXVESLPTVVVDAARGDTQCAVCKD 236
G + +D D+ F E PP V P V A T C+VC +
Sbjct: 19 GRNPLVVDYVDEESF---PVEDPPPVAGGARGGRQAVVSQPPVVRATAGVAGTVCSVCTE 75
Query: 237 GMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEYEN 284
+ + RLPCAH YH GCI PWL IR+TCP+CR ELP D E
Sbjct: 76 EIAVADAVVRLPCAHWYHAGCISPWLGIRSTCPMCRAELPASDDAAEE 123
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 214 VESLPTVVVDAA--RGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLC 271
++S+P V ++ R D C VC D E G AR +PC HLYH CI+PWL N+CP+C
Sbjct: 173 IDSMPVVKINLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVC 232
Query: 272 RHELP 276
RH LP
Sbjct: 233 RHPLP 237
>Os05g0495000
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 171 GADYDGGIDTFFLDDADDVLFGQLAAEHEPPXXXXXXXXXXXXVESLPTVVVDAA--RGD 228
G Y G++ F + L QL + + P ++++P V + R +
Sbjct: 187 GGYYRAGLEALF-----EQLQNQLGSSRQGPPPAPPSA-----IDAMPVVTISRRHLRAE 236
Query: 229 TQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELP 276
+C VC+D + G AR +PCAHLYH CI+PWL N+CP+CRH LP
Sbjct: 237 PRCPVCQDEFQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCRHSLP 284
>Os02g0767600
Length = 335
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 214 VESLPTVVVDAAR--GDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLC 271
++SLPTV + A +QC VCK+ E GE AR++PC H+YH CI+PWL + N+CP+C
Sbjct: 180 IDSLPTVQITGAHLSDGSQCPVCKEDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVC 239
Query: 272 RHEL 275
R++L
Sbjct: 240 RYQL 243
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 214 VESLPTVVVDAARGD--TQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLC 271
VES+PTV V AA GD + CAVC + AGERA +PC H +H CI+PWL + ++CP+C
Sbjct: 195 VESMPTVEV-AAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVC 253
Query: 272 RHELPT 277
R +LPT
Sbjct: 254 RFQLPT 259
>Os09g0434200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 21/126 (16%)
Query: 162 NSLGSLVVDGADYDGGIDTFFLDDADDVLFGQLAAEHEPPXXXXXXXXXXXXVESLPTVV 221
N L ++ VDG D + ++ + L +A PP V +LP V
Sbjct: 182 NFLNTMTVDG-DLEAALE--------ESLQNVMANPKVPPASKEV-------VANLPVVT 225
Query: 222 VD---AAR--GDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELP 276
V AR +TQCAVC++ + ++ + LPC HL+H C+ PWL N+CP+CRHEL
Sbjct: 226 VTEEIIARLGKETQCAVCRESLLVDDKMQELPCKHLFHPPCLKPWLDENNSCPICRHELR 285
Query: 277 TDDPEY 282
TDD Y
Sbjct: 286 TDDHVY 291
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 17/119 (14%)
Query: 170 DGADYDGGIDT--FFLDDADDVLFGQLAAEH-----EPPXXXXXXXXXXXXVESLPTVVV 222
D ++ G+ +FL D+L LA PP VE+LPTV +
Sbjct: 197 DSSNTSSGVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEA-------VEALPTVNI 249
Query: 223 DAARGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPE 281
G C+VC + E G A+ +PC H +H CILPWL + ++CP+CR +LPT++ +
Sbjct: 250 QEVLG---CSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESK 305
>Os09g0243200 Zinc finger, RING-type domain containing protein
Length = 155
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 216 SLPTVVV--DAARGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRH 273
+LP V+ + G CAVC + + A + RLPCAH YH GCI PWL IR CP CR
Sbjct: 54 ALPAAVLAPEEVAGAVVCAVCTEEVAARQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRA 113
Query: 274 ELPTDDPEYENWK 286
ELP +P +W+
Sbjct: 114 ELPR-EPAAADWR 125
>Os12g0140700 Zinc finger, RING-type domain containing protein
Length = 197
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 231 CAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEY 282
CAVC + EAGE+ R+PC+H +H CIL WL + + CPLCR +PT D Y
Sbjct: 146 CAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQDQSY 197
>Os12g0140233 Zinc finger, RING-type domain containing protein
Length = 199
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 231 CAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEY 282
CAVC + EAGE+ R+PC+H +H CIL WL + + CPLCR +PT D Y
Sbjct: 148 CAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQDQSY 199
>Os12g0139100
Length = 228
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 214 VESLPTVVVDAARGDTQ-CAVCKDGMEAGERARRLPCA--HLYHDGCILPWLAIRNTCPL 270
+ SLP + V +G+ + C VC G E G++ RR+PCA H +H+ CI WL I CPL
Sbjct: 126 IVSLPEITVGDEKGEAKDCPVCLQGFEEGDKLRRMPCADSHCFHEQCIFSWLVINRHCPL 185
Query: 271 CRHELP 276
CR LP
Sbjct: 186 CRFPLP 191
>Os11g0142800
Length = 231
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 214 VESLPTVVVDAARGDTQ-CAVCKDGMEAGERARRLPCA--HLYHDGCILPWLAIRNTCPL 270
+ +LP + V +G+ + C VC G E G++ R++PCA H +H+ CI WL I CPL
Sbjct: 126 IVNLPEITVGDEKGEAKDCPVCLQGFEEGDKLRKMPCADSHCFHEQCIFSWLLINRHCPL 185
Query: 271 CRHELPTDDPEYE 283
CR LP + E E
Sbjct: 186 CRFPLPAETEEDE 198
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.140 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,137,678
Number of extensions: 504975
Number of successful extensions: 1473
Number of sequences better than 1.0e-10: 31
Number of HSP's gapped: 1549
Number of HSP's successfully gapped: 31
Length of query: 311
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 210
Effective length of database: 11,762,187
Effective search space: 2470059270
Effective search space used: 2470059270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)