BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0569900 Os12g0569900|Os12g0569900
(348 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0569900 Similar to Zn finger protein (Fragment) 299 2e-81
Os03g0276300 156 2e-38
Os05g0112200 Similar to Zn finger protein (Fragment) 147 1e-35
Os07g0236700 Similar to Dof2 (Fragment) 145 5e-35
Os03g0821200 Similar to Zn finger protein (Fragment) 141 7e-34
Os07g0508900 Zinc finger, Dof-type family protein 120 2e-27
Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-bi... 116 2e-26
Os03g0585600 115 7e-26
Os03g0764900 Similar to Zn finger protein (Fragment) 111 8e-25
Os02g0707200 Similar to Zn finger protein (Fragment) 110 2e-24
Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-bi... 108 4e-24
Os06g0284500 Zinc finger, Dof-type family protein 108 8e-24
Os05g0440000 Zinc finger, Dof-type family protein 107 2e-23
Os01g0193300 105 5e-23
Os02g0252400 Similar to Zn finger protein (Fragment) 101 9e-22
Os02g0673700 Zinc finger, Dof-type family protein 100 3e-21
Os08g0490100 Similar to PBF protein 99 3e-21
Os07g0685000 Similar to Dof3 gene (Fragment) 96 3e-20
Os09g0475800 Similar to Zn finger protein (Fragment) 96 4e-20
Os01g0263900 Zinc finger, Dof-type family protein 96 6e-20
Os01g0758200 Similar to Dof2 (Fragment) 95 8e-20
Os01g0277500 Similar to Dof3 gene (Fragment) 95 8e-20
Os03g0169600 Zinc finger, Dof-type family protein 94 2e-19
Os12g0590700 93 3e-19
Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-bi... 92 7e-19
Os03g0619100 Zinc finger, Dof-type family protein 90 2e-18
Os04g0678400 Zinc finger, Dof-type family protein 87 2e-17
Os10g0496000 Zinc finger, Dof-type family protein 85 6e-17
Os01g0673700 77 1e-14
AB028133 75 9e-14
>Os12g0569900 Similar to Zn finger protein (Fragment)
Length = 348
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/348 (52%), Positives = 182/348 (52%)
Query: 1 MVFSSLPIFLDPPNWTQMQQQPLQCLIGGGGSDHHHLMXXXXXXXXXXXXXXXXXXXXXX 60
MVFSSLPIFLDPPNWTQMQQQPLQCLIGGGGSDHHHLM
Sbjct: 1 MVFSSLPIFLDPPNWTQMQQQPLQCLIGGGGSDHHHLMPPPSGLAPLPSAAGAADTAASA 60
Query: 61 XXXXXXXXXXXXXVVSMSERARLARVPLPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHF 120
VVSMSERARLARVPLPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHF
Sbjct: 61 PAAAAQQQQPRPAVVSMSERARLARVPLPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHF 120
Query: 121 CKACRRYWTRGGALRNVPVGGGCRRNTKRSTKKXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
CKACRRYWTRGGALRNVPVGGGCRRNTKRSTKK
Sbjct: 121 CKACRRYWTRGGALRNVPVGGGCRRNTKRSTKKSSSSSSRQGGGAGNAAAAATSSSSTTS 180
Query: 181 XXXXXXXXXXXXXXXXXXXDVIASMQAGGALLPHHLIGGLPXXXXXXXXXXXXXXGYXXX 240
DVIASMQAGGALLPHHLIGGLP GY
Sbjct: 181 TSTTATTSSAAAAAAAAAADVIASMQAGGALLPHHLIGGLPSSAAAAAALEASLEGYHHH 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXYHFXXXXXXXXXXXXXXXFPRGVASGLLAQLASVKME 300
YHF FPRGVASGLLAQLASVKME
Sbjct: 241 HHAHGHQLPFLQPPPFLQQGLHGYHFADGDVAAGAALADGGFPRGVASGLLAQLASVKME 300
Query: 301 EHXXXXXXXXXXXXXXAHEQYWHXXXXXXXWPAEFLXXXXXXXXXNVL 348
EH AHEQYWH WPAEFL NVL
Sbjct: 301 EHGTNNGGGVGGGFVGAHEQYWHGGNGGGGWPAEFLSGFSSSSSGNVL 348
>Os03g0276300
Length = 403
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Query: 1 MVFSSLPIFLDPPNWTQMQQQPLQCLIGGGGSDHHHLMXXXXXXXXXXXXXXXXXXXXXX 60
MVF S+P +LDPPNW Q QP + GGG H +
Sbjct: 1 MVFPSVPAYLDPPNWNNQQGQPPRPANVGGGDAQH--LPVGPTAAAAAPGEIGGLPTSSS 58
Query: 61 XXXXXXXXXXXXXVVSMSERARLARVPLPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHF 120
SM+ERARLAR P PEP L+CPRCDSTNTKFCY+NNYSLSQPRHF
Sbjct: 59 SASAAAAAAQQARPNSMAERARLARAPQPEP-ALKCPRCDSTNTKFCYYNNYSLSQPRHF 117
Query: 121 CKACRRYWTRGGALRNVPVGGGCRRNTK 148
CK CRRYWTRGG+LRNVPVGGGCRRN +
Sbjct: 118 CKTCRRYWTRGGSLRNVPVGGGCRRNKR 145
>Os05g0112200 Similar to Zn finger protein (Fragment)
Length = 290
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
Query: 75 VSMSERARLARVPLPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGAL 134
+SMSERARLAR+PLPEPG L+CPRCDSTNTKFCYFNNYSLSQPRHFC+ACRRYWTRGGAL
Sbjct: 22 MSMSERARLARIPLPEPG-LKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGAL 80
Query: 135 RNVPVGGGCRRNTKRSTKK 153
RNVPVGGG RR+ KR+ K
Sbjct: 81 RNVPVGGGYRRHAKRAKPK 99
>Os07g0236700 Similar to Dof2 (Fragment)
Length = 332
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 73/78 (93%), Gaps = 2/78 (2%)
Query: 75 VSMSERARLARVPLPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGAL 134
VSM+ERAR+A++P PEPG L+CPRCDSTNTKFCYFNNYSL+QPRHFCKACRRYWTRGGAL
Sbjct: 35 VSMAERARMAKIPQPEPG-LKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGAL 93
Query: 135 RNVPVGGGCRRNTKRSTK 152
RNVPVGGG RRN KR TK
Sbjct: 94 RNVPVGGGFRRN-KRGTK 110
>Os03g0821200 Similar to Zn finger protein (Fragment)
Length = 414
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 69/73 (94%), Gaps = 1/73 (1%)
Query: 76 SMSERARLARVPLPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALR 135
SM+ERARLA++P PEPG L+CPRC+STNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALR
Sbjct: 101 SMTERARLAKIPQPEPG-LKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALR 159
Query: 136 NVPVGGGCRRNTK 148
NVPVGGGCRRN +
Sbjct: 160 NVPVGGGCRRNKR 172
>Os07g0508900 Zinc finger, Dof-type family protein
Length = 359
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 56/64 (87%), Gaps = 1/64 (1%)
Query: 87 PLPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
P P LRCPRCDS NTKFCY+NNYSLSQPRHFCKAC+RYWTRGG LRNVPVGGGCR+N
Sbjct: 42 PDPRAEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKN 101
Query: 147 TKRS 150
KRS
Sbjct: 102 -KRS 104
>Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 282
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Query: 88 LPEPGTLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNT 147
+P P ++CPRC+STNTKFCY+NNY+LSQPRHFCK+CRRYWT+GG LRNVPVGGGCR+ T
Sbjct: 39 IPSPEAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRK-T 97
Query: 148 KRS 150
KRS
Sbjct: 98 KRS 100
>Os03g0585600
Length = 371
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
LRCPRCDS NTKFCY+NNYSLSQPRHFCK CRRYWT+GGALRNVPVGGGCR+N
Sbjct: 48 LRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKN 100
>Os03g0764900 Similar to Zn finger protein (Fragment)
Length = 359
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 145
LRCPRC+S+NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALRNVP+GGGCR+
Sbjct: 79 LRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK 130
>Os02g0707200 Similar to Zn finger protein (Fragment)
Length = 281
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 53/55 (96%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTK 148
L+CPRC+ST+TKFCY+NNYSLSQPR+FCK CRRYWT+GG+LRNVPVGGGCR+N +
Sbjct: 37 LKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNVPVGGGCRKNKR 91
>Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 320
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 50/54 (92%)
Query: 95 RCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTK 148
CPRCDS NTKFCY+NNYSLSQPR+FCK CRRYWT+GG+LRNVPVGGGCR+N +
Sbjct: 26 NCPRCDSPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 79
>Os06g0284500 Zinc finger, Dof-type family protein
Length = 289
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 44/49 (89%), Positives = 48/49 (97%)
Query: 95 RCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGC 143
RCPRCDS+NTKFCY+NNY+LSQPRHFCKACRRYWT+GG LRNVPVGGGC
Sbjct: 31 RCPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGGC 79
>Os05g0440000 Zinc finger, Dof-type family protein
Length = 327
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 50/53 (94%)
Query: 96 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTK 148
CPRC+S NTKFCY+NNYSLSQPR+FCK CRRYWT+GG+LRNVPVGGGCR+N +
Sbjct: 40 CPRCESPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 92
>Os01g0193300
Length = 215
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 50/55 (90%)
Query: 90 EPGTLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCR 144
E L CPRC+STNTKFCY+NNY+L+QPRHFCKACRRYWTRGGALRNVPVGGG R
Sbjct: 26 EAEGLACPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTRGGALRNVPVGGGTR 80
>Os02g0252400 Similar to Zn finger protein (Fragment)
Length = 373
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 49/53 (92%)
Query: 96 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTK 148
CPRC+S TKFCY+NNYS++QPR+FC+ CRRYWT+GG+LRNVPVGGGCR++ +
Sbjct: 47 CPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSKR 99
>Os02g0673700 Zinc finger, Dof-type family protein
Length = 375
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 93 TLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGG 142
L CPRC+STNTKFCY+NNYSL QPR+FCK CRRYWT GG+LRNVPVGGG
Sbjct: 73 ALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGG 122
>Os08g0490100 Similar to PBF protein
Length = 276
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 45/51 (88%)
Query: 96 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
CPRC+S +TKFCY+NNY+ SQPRHFCK CRRYWT+GG LRNVPVGGG R+
Sbjct: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
>Os07g0685000 Similar to Dof3 gene (Fragment)
Length = 476
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKRST 151
L CPRC+S +TKFCY+NNY+++QPRHFCK+C+RYWT GG++RN+PVG G RR +K ST
Sbjct: 108 LPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGSMRNLPVGAG-RRKSKSST 164
>Os09g0475800 Similar to Zn finger protein (Fragment)
Length = 230
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 46/49 (93%)
Query: 96 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCR 144
CPRC+S +TKFCY+NNY+ SQPRHFCK+CRRYWT+GG+LRNVPVGGG R
Sbjct: 44 CPRCESRDTKFCYYNNYNTSQPRHFCKSCRRYWTKGGSLRNVPVGGGSR 92
>Os01g0263900 Zinc finger, Dof-type family protein
Length = 496
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKRST 151
L CPRC+S +TKFCY+NNY+++QPRHFCK C+RYWT GG +RNVPVG G RR +K S+
Sbjct: 105 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG-RRKSKSSS 161
>Os01g0758200 Similar to Dof2 (Fragment)
Length = 211
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
L CPRC S +TKFCYFNNY+++QPRHFCKAC RYWT GGALRNVPVG G R+N
Sbjct: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKN 161
>Os01g0277500 Similar to Dof3 gene (Fragment)
Length = 490
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
L CPRC+S TKFCYFNNY++ QPRHFC+ C+RYWT GGA+RNVPVG G RRN
Sbjct: 114 LPCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRRRN 166
>Os03g0169600 Zinc finger, Dof-type family protein
Length = 440
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKRS 150
L CPRC S +TKFCY+NNY+++QPRHFCK C+RYWT GGA+RNVPVG G R++ S
Sbjct: 106 LPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSVS 162
>Os12g0590700
Length = 265
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 47/56 (83%)
Query: 95 RCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKRS 150
+CPRC S +TKFCY+NNY+ +QPRHFC+ACRRYWT GG+LRNVP+GG R+ + S
Sbjct: 52 QCPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRPRPS 107
>Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 194
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGG 142
L CPRC S +TKFCYFNNY+++QPRHFCK C+RYWT GGA+RNVPVG G
Sbjct: 95 LPCPRCSSMDTKFCYFNNYNVNQPRHFCKHCQRYWTAGGAMRNVPVGAG 143
>Os03g0619100 Zinc finger, Dof-type family protein
Length = 202
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 43/47 (91%)
Query: 95 RCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGG 141
+CPRC S +TKFCY+NNY+ SQPRHFC+ACRRYWT GG+LRNVP+GG
Sbjct: 50 QCPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIGG 96
>Os04g0678400 Zinc finger, Dof-type family protein
Length = 207
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 96 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPV 139
CPRC STNTKFCY+NNYS SQPRHFC+ACRRYWT GG LR+VPV
Sbjct: 52 CPRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPV 95
>Os10g0496000 Zinc finger, Dof-type family protein
Length = 247
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Query: 99 CDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKR 149
C S NTKFCY+NNYS +QPR+ CKACRR+WT GG LR+VPVGGG R+N+KR
Sbjct: 83 CGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGG-RKNSKR 132
>Os01g0673700
Length = 175
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 36/44 (81%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNV 137
L CPRC S TKFCYFNNY++ QPRH C++CRRYWT GGALR V
Sbjct: 84 LPCPRCGSRETKFCYFNNYNVRQPRHLCRSCRRYWTAGGALRRV 127
>AB028133
Length = 235
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGG 132
L CPRC S +TKFCYFNNY+++QPRHFCKAC RYWT GG
Sbjct: 116 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGG 154
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.139 0.468
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,238,229
Number of extensions: 208024
Number of successful extensions: 714
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 708
Number of HSP's successfully gapped: 31
Length of query: 348
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 246
Effective length of database: 11,709,973
Effective search space: 2880653358
Effective search space used: 2880653358
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 156 (64.7 bits)