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Os02g0673700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, Dof-type family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.41 (0.0217) R2 : 0.48
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.07 (0.0524) R2dC : 0.476 R2C : 0.471
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.112 (0.0456) R2dN8 : 0.00884 R2N8 : 0.00433
σ : 0.409
deviance : 76.41
__
_____
C
peak time of C : 1.67
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.67 0.347 9.5 -0.379 0.993 0.916 0.157 -4.91 -0.0439 1.78 30 1215 -- --
56.61 0.35 9.41 0.573 0.985 0.412 0.0875 -- -0.104 1.76 27.1 2647 -- --
54.48 0.344 9.5 -0.354 0.983 0.914 -- -4.7 -0.0895 1.84 29.83 1172 -- --
56.57 0.35 9.41 0.528 0.981 0.424 -- -- -0.115 1.73 27.05 2651 -- --
107.34 0.483 9.51 -0.444 -- 1.13 -- -4.22 -0.277 -- 29.39 1150 -- --
63.98 0.375 9.4 0.689 1.06 -- 0.175 -- -0.0347 1.66 -- -- -- --
64.11 0.375 9.4 0.683 1.06 -- -- -- -0.0357 1.65 -- -- -- --
106.43 0.483 9.36 0.866 -- -0.541 -- -- 0.0742 -- 27.05 2651 -- --
63.11 0.37 9.43 -- 0.976 0.544 -- -- -0.201 1.75 27.1 2649 -- --
132.43 0.538 9.38 0.726 -- -- -- -- -0.0122 -- -- -- -- --
76.41 0.409 9.41 -- 1.07 -- -- -- -0.112 1.67 -- -- -- --
117.32 0.504 9.43 -- -- 0.808 -- -- -0.25 -- 26.6 2579 -- --
146.33 0.565 9.4 -- -- -- -- -- -0.0928 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.31 radiation 1.0 270 < th dose dependent rect. 12 13
11 45.87 radiation 1.0 270 < th dose independent rect. 12 13
18 46.10 radiation 30.0 270 < th dose dependent rect. 24 9
33 46.37 radiation 40.0 90 < th dose independent rect. 3 16
36 46.43 temperature 10.0 270 > th dose dependent rect. 6 7
37 46.45 humidity 50.0 270 > th dose dependent rect. 18 7
41 46.51 temperature 15.0 270 > th dose independent rect. 18 7
50 46.63 wind 5.0 270 < th dose independent rect. 24 7
53 46.71 wind 9.0 270 < th dose dependent rect. 24 7
57 46.79 precipitation 0.1 270 < th dose independent rect. 1 17
58 46.79 precipitation 0.1 270 < th dose dependent rect. 1 17
74 46.88 humidity 50.0 270 > th dose independent rect. 18 7
76 46.88 radiation 20.0 270 < th dose independent rect. 18 7
80 46.88 temperature 10.0 270 > th dose independent rect. 1 17
81 46.88 atmosphere 1015.0 270 < th dose independent rect. 1 17
86 46.93 wind 7.0 90 < th dose dependent rect. 2 7
87 46.95 wind 9.0 270 < th dose independent rect. 18 7
88 46.95 precipitation 0.1 270 < th dose independent rect. 13 17
89 46.95 precipitation 0.1 270 < th dose dependent rect. 13 17
93 47.00 atmosphere 995.0 270 > th dose independent rect. 1 17
96 47.01 temperature 15.0 270 > th dose independent rect. 8 16
98 47.03 temperature 30.0 270 < th dose independent rect. 18 7
99 47.03 atmosphere 995.0 270 > th dose independent rect. 18 7
105 47.08 radiation 20.0 270 < th dose independent rect. 24 8
111 47.12 wind 7.0 270 < th dose dependent rect. 1 5
119 47.20 wind 5.0 270 < th dose independent rect. 1 5
125 47.24 wind 9.0 270 < th dose independent rect. 5 9
136 47.31 wind 9.0 270 < th dose independent rect. 6 7
137 47.31 precipitation 0.1 270 < th dose independent rect. 24 8
138 47.31 precipitation 0.1 270 < th dose dependent rect. 24 8
140 47.32 temperature 15.0 270 > th dose independent rect. 6 7
144 47.35 precipitation 0.1 270 < th dose independent rect. 6 7
145 47.35 precipitation 0.1 270 < th dose dependent rect. 6 7
150 47.38 precipitation 0.1 270 < th dose independent rect. 5 9
151 47.38 precipitation 0.1 270 < th dose dependent rect. 5 9
154 47.40 wind 9.0 270 < th dose independent rect. 8 16
156 47.41 temperature 10.0 270 > th dose independent rect. 5 9
157 47.41 atmosphere 995.0 270 > th dose independent rect. 5 9
158 47.41 atmosphere 1015.0 270 < th dose independent rect. 5 9
159 47.41 temperature 10.0 270 > th dose independent rect. 14 15
161 47.41 wind 7.0 270 < th dose independent rect. 13 17
166 47.43 atmosphere 995.0 270 > th dose independent rect. 6 7
167 47.43 atmosphere 1015.0 270 < th dose independent rect. 6 7
168 47.43 radiation 1.0 270 > th dose independent rect. 6 7
170 47.43 temperature 10.0 270 > th dose independent rect. 13 17
172 47.44 wind 9.0 270 < th dose independent rect. 1 17
193 47.51 temperature 10.0 90 > th dose independent rect. 3 16
194 47.51 atmosphere 1015.0 90 < th dose independent rect. 3 16
204 47.52 wind 1.0 270 > th dose independent rect. 5 8
233 47.63 atmosphere 1010.0 90 < th dose independent rect. 2 7
236 47.64 temperature 10.0 270 > th dose independent rect. 24 8
237 47.64 temperature 30.0 270 < th dose independent rect. 24 8
238 47.64 humidity 50.0 270 > th dose independent rect. 24 8
240 47.64 atmosphere 995.0 270 > th dose independent rect. 24 8
244 47.65 atmosphere 1015.0 270 < th dose independent rect. 24 8
250 47.66 radiation 40.0 270 < th dose independent rect. 24 8
270 47.70 precipitation 0.1 270 < th dose independent rect. 18 7
271 47.70 precipitation 0.1 270 < th dose dependent rect. 18 7
277 47.71 radiation 40.0 270 < th dose independent rect. 13 17
295 47.72 radiation 40.0 90 < th dose dependent rect. 3 16
307 47.75 atmosphere 995.0 270 > th dose independent rect. 13 17
311 47.77 temperature 15.0 270 > th dose independent rect. 19 17
321 47.81 temperature 15.0 270 > th dose independent rect. 6 19
330 47.85 radiation 1.0 270 < th dose independent rect. 5 21
348 47.93 radiation 1.0 270 < th dose dependent sin 16 NA
367 47.97 precipitation 0.1 270 < th dose independent rect. 1 5
371 47.97 precipitation 0.1 270 < th dose dependent rect. 1 5
374 48.00 wind 3.0 270 < th dose independent rect. 2 3
386 48.04 radiation 1.0 270 > th dose independent rect. 13 17
396 48.06 wind 9.0 270 < th dose independent rect. 6 19
406 48.12 precipitation 0.1 90 < th dose independent rect. 2 7
408 48.12 precipitation 0.1 90 < th dose dependent rect. 2 7
423 48.16 wind 7.0 270 < th dose dependent rect. 2 3
440 48.21 wind 9.0 90 < th dose independent rect. 3 16
457 48.25 humidity 50.0 270 > th dose independent rect. 6 7
469 48.29 temperature 10.0 270 > th dose independent rect. 1 5
471 48.29 temperature 30.0 270 < th dose independent rect. 1 5
472 48.29 humidity 50.0 270 > th dose independent rect. 1 5
475 48.29 atmosphere 995.0 270 > th dose independent rect. 1 5
476 48.29 atmosphere 1015.0 270 < th dose independent rect. 1 5
477 48.29 radiation 20.0 270 < th dose independent rect. 1 5
493 48.34 temperature 30.0 90 < th dose independent rect. 2 7
501 48.35 wind 9.0 270 < th dose independent rect. 19 17
502 48.35 radiation 40.0 10 < th dose independent rect. 3 18
534 48.43 temperature 10.0 270 > th dose independent rect. 12 7
536 48.43 atmosphere 1015.0 270 < th dose independent rect. 12 7
539 48.43 atmosphere 995.0 270 > th dose independent rect. 19 17
542 48.44 radiation 1.0 270 > th dose independent rect. 13 6
566 48.49 humidity 60.0 90 > th dose independent rect. 2 7
574 48.50 temperature 10.0 90 > th dose independent rect. 2 7
577 48.50 atmosphere 995.0 90 > th dose independent rect. 2 7
583 48.50 precipitation 0.1 10 < th dose independent rect. 3 18
584 48.50 precipitation 0.1 10 < th dose dependent rect. 3 18
585 48.51 precipitation 0.1 270 < th dose independent rect. 12 7
588 48.51 precipitation 0.1 270 < th dose dependent rect. 12 7
591 48.52 radiation 1.0 270 > th dose independent sin 16 NA
593 48.52 radiation 40.0 90 < th dose independent rect. 2 9
599 48.54 radiation 40.0 10 < th dose dependent rect. 3 18
610 48.55 atmosphere 995.0 270 > th dose independent rect. 12 7
616 48.56 temperature 10.0 270 > th dose dependent rect. 12 8
619 48.57 precipitation 0.1 270 < th dose independent rect. 8 16
622 48.57 precipitation 0.1 270 < th dose dependent rect. 8 16
631 48.59 wind 7.0 10 < th dose dependent rect. 3 7
637 48.61 humidity 50.0 270 > th dose dependent rect. 24 8
646 48.64 wind 1.0 270 > th dose independent rect. 8 16
649 48.65 temperature 15.0 10 > th dose independent rect. 21 6
664 48.70 wind 9.0 270 < th dose dependent rect. 14 16
675 48.73 wind 7.0 270 < th dose independent rect. 13 6
685 48.75 humidity 50.0 90 > th dose dependent rect. 2 7
696 48.78 temperature 10.0 270 > th dose dependent rect. 13 17
733 48.85 humidity 50.0 270 > th dose independent rect. 19 17
738 48.87 humidity 50.0 90 > th dose dependent rect. 2 9
747 48.90 humidity 50.0 270 > th dose independent rect. 20 15
769 48.96 radiation 1.0 270 < th dose independent sin 16 NA
809 49.03 radiation 20.0 90 < th dose independent rect. 3 16
812 49.03 precipitation 0.1 270 < th dose independent rect. 6 19
815 49.03 precipitation 0.1 270 < th dose dependent rect. 6 19
817 49.04 wind 1.0 270 > th dose independent rect. 13 6
854 49.10 humidity 50.0 270 > th dose dependent rect. 1 5
879 49.12 wind 1.0 270 > th dose independent rect. 18 7
887 49.14 temperature 30.0 10 < th dose independent rect. 21 6
888 49.14 humidity 50.0 10 > th dose independent rect. 21 6
891 49.14 atmosphere 995.0 10 > th dose independent rect. 21 6
893 49.14 radiation 1.0 10 < th dose independent rect. 21 6
898 49.14 temperature 10.0 10 > th dose independent rect. 3 18
900 49.14 atmosphere 1015.0 10 < th dose independent rect. 3 18
901 49.14 radiation 1.0 10 < th dose dependent rect. 21 6
907 49.15 precipitation 0.1 270 < th dose independent rect. 2 3
911 49.15 precipitation 0.1 270 < th dose dependent rect. 2 3
917 49.16 humidity 90.0 270 < th dose independent rect. 6 7
923 49.17 wind 9.0 10 < th dose independent rect. 21 6
970 49.18 humidity 50.0 10 > th dose dependent rect. 3 7