BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0449400 Os09g0449400|J023086D02
(164 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0449400 Zinc finger, C2H2-type domain containing protein 318 9e-88
Os03g0237250 Zinc finger, C2H2-type domain containing protein 237 2e-63
Os03g0197700 Zinc finger, C2H2-type domain containing protein 205 1e-53
Os02g0672100 Zinc finger, C2H2-type domain containing protein 204 2e-53
Os01g0195000 Zinc finger, C2H2-type domain containing protein 204 2e-53
Os04g0566400 Zinc finger, C2H2-type domain containing protein 203 5e-53
Os09g0555700 Zinc finger, C2H2-type domain containing protein 199 6e-52
Os01g0242200 Zinc finger, C2H2-type domain containing protein 199 1e-51
Os08g0554400 Zinc finger, C2H2-type domain containing protein 198 1e-51
Os02g0518500 196 5e-51
Os10g0419200 Zinc finger, C2H2-type domain containing protein 196 5e-51
Os01g0935000 Zinc finger, C2H2-type domain containing protein 194 2e-50
AK067268 192 8e-50
Os01g0572300 Zinc finger, C2H2-type domain containing protein 178 2e-45
Os04g0165200 Zinc finger, C2H2-type domain containing protein 78 2e-15
Os01g0871200 Zinc finger, C2H2-type domain containing protein 78 3e-15
Os02g0572900 Zinc finger, C2H2-type domain containing protein 77 7e-15
Os08g0562300 Zinc finger, C2H2-type domain containing protein 73 8e-14
Os03g0838800 Zinc finger, C2H2-type domain containing protein 65 2e-11
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 65 2e-11
Os12g0170400 Zinc finger, C2H2-type domain containing protein 64 5e-11
>Os09g0449400 Zinc finger, C2H2-type domain containing protein
Length = 164
Score = 318 bits (816), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 155/164 (94%), Positives = 155/164 (94%)
Query: 1 YGWVRSSLVAAGAWNQTALXXXXXXXXXADPDAEVVSLSPRTLLESDRYVCEICNQGFQR 60
YGWVRSSLVAAGAWNQTAL ADPDAEVVSLSPRTLLESDRYVCEICNQGFQR
Sbjct: 1 YGWVRSSLVAAGAWNQTALGGGGGGGGGADPDAEVVSLSPRTLLESDRYVCEICNQGFQR 60
Query: 61 DQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRK 120
DQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRK
Sbjct: 61 DQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRK 120
Query: 121 HSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHSCDCGRVFSR 164
HSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHSCDCGRVFSR
Sbjct: 121 HSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHSCDCGRVFSR 164
>Os03g0237250 Zinc finger, C2H2-type domain containing protein
Length = 251
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 125/157 (79%), Gaps = 22/157 (14%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAA--- 86
DPDAEVV+LSPRTLLESDRYVCEIC QGFQR+QNLQMHRRRHKVPW+L+KR A A
Sbjct: 60 DPDAEVVALSPRTLLESDRYVCEICGQGFQREQNLQMHRRRHKVPWRLVKRPAAATAAED 119
Query: 87 -------------------RKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQW 127
RKRVFVCPEP+CLHHDP+HALGDLVGIKKHFRRKH G RQW
Sbjct: 120 GGAAGGGGGAGGGAGGGGARKRVFVCPEPSCLHHDPAHALGDLVGIKKHFRRKHGGRRQW 179
Query: 128 ACARCSKAYAVHSDYKAHLKTCGTRGHSCDCGRVFSR 164
CARC+K YAV SDYKAHLKTCGTRGHSCDCGRVFSR
Sbjct: 180 VCARCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 216
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 205 bits (521), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
Query: 29 ADPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARK 88
ADPDAEV++LSP+TLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL +R +G+ RK
Sbjct: 22 ADPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR-SGKEVRK 80
Query: 89 RVFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKT 148
RV+VCPEPTC+HHDPS ALGDL GIKKHF RKH G ++W C +CSK YAV SD+KAH KT
Sbjct: 81 RVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDWKAHTKT 139
Query: 149 CGTRGHSCDCGRVFSR 164
CG+R + CDCG +FSR
Sbjct: 140 CGSREYRCDCGTLFSR 155
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 89/135 (65%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 89
DPDAEV++LSP+TLL ++R+VCE+CN+GFQR+QNLQ+HRR H +PWKL ++ +A R+R
Sbjct: 76 DPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPLQAQRRR 135
Query: 90 VFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 149
V++CPEPTC+HHDPS ALGDL GIKKHF RKH G ++W C +CSK YAV SD+KAH K C
Sbjct: 136 VYLCPEPTCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKIC 194
Query: 150 GTRGHSCDCGRVFSR 164
GTR + CDCG +FSR
Sbjct: 195 GTREYRCDCGTLFSR 209
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 90/135 (66%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 89
DP+AEV++LSPRTL+ ++RYVCEIC +GFQRDQNLQ+HRR H +PWKL +R E RK+
Sbjct: 55 DPEAEVIALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRNPKEVVRKK 114
Query: 90 VFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 149
V+VCPE C+HHDP+ ALGDL GIKKHF RKH G ++W C +CSK YAVHSD+KAH K C
Sbjct: 115 VYVCPEAGCVHHDPARALGDLTGIKKHFSRKH-GEKKWKCDKCSKRYAVHSDWKAHSKVC 173
Query: 150 GTRGHSCDCGRVFSR 164
GTR + CDCG +FSR
Sbjct: 174 GTREYRCDCGTLFSR 188
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 203 bits (516), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 114/136 (83%), Gaps = 1/136 (0%)
Query: 29 ADPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARK 88
ADPDAEV++LSP+TLL ++R+VCE+CN+GFQR+QNLQ+HRR H +PWKL ++ +A R+
Sbjct: 77 ADPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPAQAQRR 136
Query: 89 RVFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKT 148
RV++CPEPTC+HHDP+ ALGDL GIKKHF RKH G ++W C +CSK YAV SD+KAH K
Sbjct: 137 RVYLCPEPTCVHHDPARALGDLTGIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKI 195
Query: 149 CGTRGHSCDCGRVFSR 164
CGTR + CDCG +FSR
Sbjct: 196 CGTREYRCDCGTLFSR 211
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 199 bits (507), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 114/135 (84%), Gaps = 2/135 (1%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 89
+PDAEV++LSPRTL+ ++R+VCE+CN+GFQR+QNLQ+HRR H +PWKL ++ E AR+R
Sbjct: 57 NPDAEVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKE-ARRR 115
Query: 90 VFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 149
V++CPEP+C+HHDPS ALGDL GIKKH+ RKH G ++W C +CSK YAV SD+KAH KTC
Sbjct: 116 VYLCPEPSCVHHDPSRALGDLTGIKKHYCRKH-GEKKWRCDKCSKRYAVQSDWKAHSKTC 174
Query: 150 GTRGHSCDCGRVFSR 164
GTR + CDCG +FSR
Sbjct: 175 GTREYRCDCGTLFSR 189
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 199 bits (505), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 90/135 (66%), Positives = 113/135 (83%), Gaps = 2/135 (1%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 89
DP+AEV++LSPRTL+ ++R+VCEIC +GFQRDQNLQ+HRR H +PWKL +R +G+ RKR
Sbjct: 42 DPEAEVIALSPRTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQR-SGKEPRKR 100
Query: 90 VFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 149
V+VCPE +C+HH+PS ALGDL GIKKHF RKH G ++W C +CSK YAV SD+KAH KTC
Sbjct: 101 VYVCPEKSCVHHNPSRALGDLTGIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKTC 159
Query: 150 GTRGHSCDCGRVFSR 164
GTR + CDCG +FSR
Sbjct: 160 GTREYRCDCGTLFSR 174
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 198 bits (504), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 89
+PDAEVV+LSP TLL ++R+VCE+CN+GFQR+QNLQ+HRR H +PWKL ++ E R+R
Sbjct: 51 NPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKE-TRRR 109
Query: 90 VFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 149
V++CPEP+C+HHDPS ALGDL GIKKH+ RKH G ++W C +C+K YAV SD+KAH KTC
Sbjct: 110 VYLCPEPSCVHHDPSRALGDLTGIKKHYSRKH-GEKKWKCDKCNKRYAVQSDWKAHSKTC 168
Query: 150 GTRGHSCDCGRVFSR 164
GTR + CDCG +FSR
Sbjct: 169 GTREYRCDCGTLFSR 183
>Os02g0518500
Length = 492
Score = 196 bits (499), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 110/135 (81%), Gaps = 2/135 (1%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 89
DPD EVV+LSP+TLL ++RY+CE+C++GFQRDQNLQ+HRR H +PWKL +R + E A+K+
Sbjct: 47 DPDVEVVALSPKTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWKLKQRSSTE-AKKK 105
Query: 90 VFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 149
V+VCPE TC HHD + ALGDL GIKKH+ RKH G ++W C RCSK YAV SD+KAH K C
Sbjct: 106 VYVCPEITCPHHDATRALGDLTGIKKHYSRKH-GEKKWKCDRCSKKYAVQSDWKAHTKIC 164
Query: 150 GTRGHSCDCGRVFSR 164
GT+ + CDCG +FSR
Sbjct: 165 GTKEYRCDCGTIFSR 179
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 196 bits (499), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/143 (64%), Positives = 112/143 (78%), Gaps = 9/143 (6%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR--------E 81
DP+AEV++LSPR L+ ++R+VCE+CN+GFQRDQNLQ+HRR H +PWKL R
Sbjct: 20 DPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTT 79
Query: 82 AGEAARKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSD 141
A A RKRV+VCPEPTC+HHDP+ ALGDL GIKKHF RKH G ++W C RC K YAVHSD
Sbjct: 80 AAPAPRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKH-GEKRWRCERCGKRYAVHSD 138
Query: 142 YKAHLKTCGTRGHSCDCGRVFSR 164
+KAH+K CGTR + CDCG +FSR
Sbjct: 139 WKAHVKNCGTREYRCDCGILFSR 161
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 194 bits (494), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/141 (66%), Positives = 109/141 (77%), Gaps = 7/141 (4%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR------EAG 83
DP AEVV+LSPRTLL ++R+VCEIC +GFQRDQNLQ+HRR H +PWKL +R G
Sbjct: 62 DPSAEVVALSPRTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRGGAGGGGGG 121
Query: 84 EAARKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYK 143
E RKRV+VCPE +C+HH PS ALGDL GIKKHF RKH G ++W C RC K YAVHSD+K
Sbjct: 122 EPPRKRVYVCPEASCVHHSPSRALGDLTGIKKHFCRKH-GEKKWKCDRCGKRYAVHSDWK 180
Query: 144 AHLKTCGTRGHSCDCGRVFSR 164
AH K CGTR + CDCG VFSR
Sbjct: 181 AHSKVCGTREYKCDCGTVFSR 201
>AK067268
Length = 324
Score = 192 bits (489), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
Query: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 89
+PDAEVV+LSP TLL ++R+VCE+CN+GFQR+QNLQ+HRR H +PWKL ++ E R+R
Sbjct: 51 NPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKE-TRRR 109
Query: 90 VFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 149
V++CPEP+C+HHDPS ALG+L GIKKH+ RKH G ++W C +C+K YAV SD+KAH KTC
Sbjct: 110 VYLCPEPSCVHHDPSRALGNLTGIKKHYSRKH-GEKKWKCDKCNKRYAVQSDWKAHSKTC 168
Query: 150 GTRGHSCDCGRVFSR 164
GTR + CDCG +FSR
Sbjct: 169 GTREYRCDCGTLFSR 183
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 178 bits (451), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
Query: 44 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPTCLHHDP 103
+ ++R+VCEIC +GFQRDQNLQ+HRR H +PWKL +R + EA RK+V++CPE +C+HHDP
Sbjct: 1 MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRKKVYICPEASCVHHDP 60
Query: 104 SHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHSCDCGRVFS 163
S ALGDL GIKKHF RKH G ++W C +CSK YAVHSD+KAH K CGTR + CDCG +FS
Sbjct: 61 SRALGDLTGIKKHFFRKH-GEKKWKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTIFS 119
Query: 164 R 164
R
Sbjct: 120 R 120
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 32 DAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK----LLKREAG--EA 85
+ +VV L LL + C++C +GF+RD NL+MH R H +K L AG A
Sbjct: 186 EVDVVELEASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTAAALTSTGAGMRAA 245
Query: 86 ARKRVFVCPEPTC---LHHDPSHALGDLVGIKKHFRRKHSGHRQWACARC-SKAYAVHSD 141
AR+ + CP C H AL +V K H+RR H + + C RC K +AV SD
Sbjct: 246 ARRCSYSCPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCP-KMYVCGRCGGKQFAVLSD 304
Query: 142 YKAHLKTCGTRGHSCDCGRVFSR 164
+ H K CG C CG FSR
Sbjct: 305 LRTHEKHCGELRWLCSCGTFFSR 327
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 35 VVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL-------KREAGEAAR 87
V+ L +L + C IC +GF+RD NL+MH R H +K K + E+A
Sbjct: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
Query: 88 KRVFVCPEPTC---LHHDPSHALGDLVGIKKHFRRKHSGHRQWACARC-SKAYAVHSDYK 143
+ CP C H L ++ +K H++R H + + C+RC +K ++V +D K
Sbjct: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHC-DKSYTCSRCNTKKFSVIADLK 386
Query: 144 AHLKTCGTRGHSCDCGRVFSR 164
H K CG C CG FSR
Sbjct: 387 THEKHCGRDKWLCSCGTTFSR 407
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 29 ADPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK------REA 82
D D +VV L LL + C+IC +GF+RD NL+MH R H +K L +
Sbjct: 153 GDGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPK 212
Query: 83 GEAARKRVFVCPEPTCLH---HDPSHALGDLVGIKKHFRRKHSGHRQWACARCS--KAYA 137
A R+ F CP C H L V + HFRR H + +AC RC K +A
Sbjct: 213 PPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHC-PKLYACERCGGKKRFA 271
Query: 138 VHSDYKAHLKTCGTRGH-SCDCGRVFSR 164
V +D ++HL+ CG C CG FSR
Sbjct: 272 VLADLRSHLRHCGEEAQWRCSCGTTFSR 299
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 35 VVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRH----------KVPWKLLKREAGE 84
++ L LL + C++C +GF+RD NL+MH R H P KLL + E
Sbjct: 190 IIELDAAELLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDE 249
Query: 85 --AARKRVFVCPEPTC---LHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCS-KAYAV 138
AA R + CP+ C H L ++ K H++R H + + C RC K ++V
Sbjct: 250 TMAAAARKYSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCP-KMYVCNRCGRKHFSV 308
Query: 139 HSDYKAHLKTCGTRGHSCDCGRVFSR 164
SD + H K CG C CG FSR
Sbjct: 309 LSDLRTHEKHCGDHRWLCSCGTSFSR 334
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 34 EVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK---LLKREAGEAARK-- 88
EVV + +L + C +C +GF+RD NL+MH R H +K L + G +R
Sbjct: 149 EVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKPGGSPSRSPA 208
Query: 89 --------RVFVCPEPTCL---HHDPSHALGDLVGIKKHFRRKHSGHRQWACARCS-KAY 136
R + CP C H L +K H+RR H + + C RC+ K +
Sbjct: 209 AADAAARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHC-DKSFTCRRCNVKRF 267
Query: 137 AVHSDYKAHLKTCGTRGHSCDCGRVFSR 164
+V +D + H K CG C CG FSR
Sbjct: 268 SVVADLRTHEKHCGRDRWVCSCGTSFSR 295
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 36 VSLSPRTLLESDRYVCEICNQGFQRDQNLQMH-----RRRHKVPWKLLKREAGE--AARK 88
+ + L+ ++VC +CN+ F R N+QMH R K P L +A A K
Sbjct: 198 IPTPAQILIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLAMLK 257
Query: 89 RVFVCPEPTC---LHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAH 145
C C + H + L D ++ H++RKH G + +AC RC+K +AV D++ H
Sbjct: 258 LPCYCCAAGCRNNVGHPRARPLKDFRTLQTHYKRKH-GAKPFACRRCAKPFAVKGDWRTH 316
Query: 146 LKTCGTRGHSCDCGRVF 162
K CG R C CG F
Sbjct: 317 EKNCGKRWF-CACGSDF 332
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 35 VVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK----------LLKREAGE 84
V+ L +L + C IC +GF+RD NL+MH R H +K + E
Sbjct: 215 VLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQP 274
Query: 85 AARKRVFVCPEPTCLH---HDPSHALGDLVGIKKHFRRKHSGHRQWACARC-SKAYAVHS 140
+R + CP C H L ++ +K H++R H R C RC +K ++V +
Sbjct: 275 PQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRH-VCGRCGAKRFSVMA 333
Query: 141 DYKAHLKTCGTRGHSCDCGRVFSR 164
D K H K CG C CG FSR
Sbjct: 334 DLKTHEKHCGRDRWLCSCGTSFSR 357
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.135 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,177,364
Number of extensions: 254255
Number of successful extensions: 861
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 827
Number of HSP's successfully gapped: 25
Length of query: 164
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 71
Effective length of database: 12,179,899
Effective search space: 864772829
Effective search space used: 864772829
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 152 (63.2 bits)