BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0490100 Os08g0490100|J065152E11
(276 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0490100 Similar to PBF protein 362 e-100
Os09g0475800 Similar to Zn finger protein (Fragment) 132 2e-31
Os01g0193300 107 9e-24
Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-bi... 105 3e-23
Os12g0590700 105 4e-23
Os03g0764900 Similar to Zn finger protein (Fragment) 104 6e-23
Os07g0508900 Zinc finger, Dof-type family protein 103 2e-22
Os01g0263900 Zinc finger, Dof-type family protein 103 2e-22
Os06g0284500 Zinc finger, Dof-type family protein 101 5e-22
Os03g0585600 101 5e-22
Os02g0707200 Similar to Zn finger protein (Fragment) 101 6e-22
Os03g0276300 101 6e-22
Os03g0821200 Similar to Zn finger protein (Fragment) 100 9e-22
Os07g0685000 Similar to Dof3 gene (Fragment) 100 1e-21
Os01g0758200 Similar to Dof2 (Fragment) 100 1e-21
Os05g0440000 Zinc finger, Dof-type family protein 100 1e-21
Os07g0236700 Similar to Dof2 (Fragment) 100 1e-21
Os03g0619100 Zinc finger, Dof-type family protein 100 2e-21
Os03g0169600 Zinc finger, Dof-type family protein 100 2e-21
Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-bi... 99 2e-21
Os12g0569900 Similar to Zn finger protein (Fragment) 99 4e-21
Os05g0112200 Similar to Zn finger protein (Fragment) 99 4e-21
Os02g0252400 Similar to Zn finger protein (Fragment) 96 2e-20
Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-bi... 95 5e-20
Os01g0277500 Similar to Dof3 gene (Fragment) 94 9e-20
Os02g0673700 Zinc finger, Dof-type family protein 93 2e-19
Os04g0678400 Zinc finger, Dof-type family protein 87 2e-17
Os01g0673700 82 4e-16
AB028133 82 5e-16
Os10g0496000 Zinc finger, Dof-type family protein 80 2e-15
>Os08g0490100 Similar to PBF protein
Length = 276
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/276 (68%), Positives = 189/276 (68%)
Query: 1 MQEQQPETGRRPAQQFATVDLRRPKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG 60
MQEQQPETGRRPAQQFATVDLRRPKGY EG
Sbjct: 1 MQEQQPETGRRPAQQFATVDLRRPKGYAAAPATPQPGSAATAAAAAGPAATAAAAAAGEG 60
Query: 61 DPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKKXXXXXXX 120
DPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK
Sbjct: 61 DPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKKSSSSSSS 120
Query: 121 XXXXXXXXXXXXXKRQKTSKKRRVTTPEPLAATTPVLXXXXXXXXXXXXXXXXXXXXXXX 180
KRQKTSKKRRVTTPEPLAATTPVL
Sbjct: 121 SSSSSAAAAAPAAKRQKTSKKRRVTTPEPLAATTPVLTEAAADSAAKTTTEATSEKKTTT 180
Query: 181 XXXXXXXXXXXXXSEITTELVVPAVEEDSFTDLLQPDSAAVTLGLDFSDYPSITKSLADP 240
SEITTELVVPAVEEDSFTDLLQPDSAAVTLGLDFSDYPSITKSLADP
Sbjct: 181 STTTTTPPAPDTTSEITTELVVPAVEEDSFTDLLQPDSAAVTLGLDFSDYPSITKSLADP 240
Query: 241 DLHFEWPPPAFDMASYWPAGAGFADPDPTAVFLNLP 276
DLHFEWPPPAFDMASYWPAGAGFADPDPTAVFLNLP
Sbjct: 241 DLHFEWPPPAFDMASYWPAGAGFADPDPTAVFLNLP 276
>Os09g0475800 Similar to Zn finger protein (Fragment)
Length = 230
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 69/105 (65%), Gaps = 15/105 (14%)
Query: 7 ETGRRPAQQFATVDLRRPKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDPCPRC 66
E GRRPA QFA VDLRRPKGY GDPCPRC
Sbjct: 3 EAGRRPAPQFAGVDLRRPKGYPAAAQLTPAAEEAAAGV---------------GDPCPRC 47
Query: 67 ESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTR 111
ESRDTKFCYYNNYNTSQPRHFCK CRRYWTKGG+LRNVPVGGG+R
Sbjct: 48 ESRDTKFCYYNNYNTSQPRHFCKSCRRYWTKGGSLRNVPVGGGSR 92
>Os01g0193300
Length = 215
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 48/55 (87%)
Query: 59 EGDPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
EG CPRCES +TKFCYYNNYN +QPRHFCK CRRYWT+GG LRNVPVGGGTR K
Sbjct: 28 EGLACPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTRGGALRNVPVGGGTRNK 82
>Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 282
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 46/54 (85%)
Query: 59 EGDPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
E CPRCES +TKFCYYNNYN SQPRHFCK CRRYWTKGG LRNVPVGGG RK
Sbjct: 43 EAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRK 96
>Os12g0590700
Length = 265
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 47/51 (92%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
CPRC SRDTKFCYYNNYNT+QPRHFC+ CRRYWT GG+LRNVP+GG TRK+
Sbjct: 53 CPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPIGGSTRKR 103
>Os03g0764900 Similar to Zn finger protein (Fragment)
Length = 359
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 44/50 (88%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
CPRC S +TKFCYYNNYN +QPRHFCK CRRYWTKGG LRNVP+GGG RK
Sbjct: 81 CPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK 130
>Os07g0508900 Zinc finger, Dof-type family protein
Length = 359
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 46/51 (90%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
CPRC+S +TKFCYYNNY+ SQPRHFCK C+RYWT+GGTLRNVPVGGG RK
Sbjct: 51 CPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKN 101
>Os01g0263900 Zinc finger, Dof-type family protein
Length = 496
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 44/51 (86%)
Query: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
PCPRC S DTKFCYYNNYN +QPRHFCK C+RYWT GGT+RNVPVG G RK
Sbjct: 106 PCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK 156
>Os06g0284500 Zinc finger, Dof-type family protein
Length = 289
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 41/47 (87%), Positives = 43/47 (91%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGG 109
CPRC+S +TKFCYYNNYN SQPRHFCK CRRYWTKGG LRNVPVGGG
Sbjct: 32 CPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGG 78
>Os03g0585600
Length = 371
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 45/51 (88%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
CPRC+S +TKFCYYNNY+ SQPRHFCK CRRYWTKGG LRNVPVGGG RK
Sbjct: 50 CPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKN 100
>Os02g0707200 Similar to Zn finger protein (Fragment)
Length = 281
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 45/51 (88%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
CPRCES TKFCYYNNY+ SQPR+FCK CRRYWTKGG+LRNVPVGGG RK
Sbjct: 39 CPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNVPVGGGCRKN 89
>Os03g0276300
Length = 403
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 46/51 (90%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
CPRC+S +TKFCYYNNY+ SQPRHFCK CRRYWT+GG+LRNVPVGGG R+
Sbjct: 93 CPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRRN 143
>Os03g0821200 Similar to Zn finger protein (Fragment)
Length = 414
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 46/54 (85%)
Query: 60 GDPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
G CPRCES +TKFCY+NNY+ SQPRHFCK CRRYWT+GG LRNVPVGGG R+
Sbjct: 117 GLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRN 170
>Os07g0685000 Similar to Dof3 gene (Fragment)
Length = 476
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%)
Query: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
PCPRC S DTKFCYYNNYN +QPRHFCK C+RYWT GG++RN+PVG G RK
Sbjct: 109 PCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGSMRNLPVGAGRRK 159
>Os01g0758200 Similar to Dof2 (Fragment)
Length = 211
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 43/51 (84%)
Query: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
PCPRC SRDTKFCY+NNYN +QPRHFCK C RYWT GG LRNVPVG G RK
Sbjct: 110 PCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRK 160
>Os05g0440000 Zinc finger, Dof-type family protein
Length = 327
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 46/51 (90%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
CPRCES +TKFCYYNNY+ SQPR+FCK CRRYWTKGG+LRNVPVGGG RK
Sbjct: 40 CPRCESPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 90
>Os07g0236700 Similar to Dof2 (Fragment)
Length = 332
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 46/54 (85%)
Query: 60 GDPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
G CPRC+S +TKFCY+NNY+ +QPRHFCK CRRYWT+GG LRNVPVGGG R+
Sbjct: 52 GLKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRNVPVGGGFRRN 105
>Os03g0619100 Zinc finger, Dof-type family protein
Length = 202
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 44/50 (88%)
Query: 61 DPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGT 110
+ CPRC S DTKFCYYNNYNTSQPRHFC+ CRRYWT GG+LRNVP+GG T
Sbjct: 49 EQCPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIGGST 98
>Os03g0169600 Zinc finger, Dof-type family protein
Length = 440
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 43/51 (84%)
Query: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
PCPRC S DTKFCYYNNYN +QPRHFCK C+RYWT GG +RNVPVG G RK
Sbjct: 107 PCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRK 157
>Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 320
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 46/51 (90%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
CPRC+S +TKFCYYNNY+ SQPR+FCK CRRYWTKGG+LRNVPVGGG RK
Sbjct: 27 CPRCDSPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKN 77
>Os12g0569900 Similar to Zn finger protein (Fragment)
Length = 348
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 45/51 (88%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
CPRC+S +TKFCY+NNY+ SQPRHFCK CRRYWT+GG LRNVPVGGG R+
Sbjct: 96 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
>Os05g0112200 Similar to Zn finger protein (Fragment)
Length = 290
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 46/54 (85%)
Query: 60 GDPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
G CPRC+S +TKFCY+NNY+ SQPRHFC+ CRRYWT+GG LRNVPVGGG R+
Sbjct: 39 GLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRH 92
>Os02g0252400 Similar to Zn finger protein (Fragment)
Length = 373
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
CPRC S TKFCYYNNY+ +QPR+FC+ CRRYWT+GG+LRNVPVGGG RK
Sbjct: 47 CPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRK 96
>Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 194
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGT 110
PCPRC S DTKFCY+NNYN +QPRHFCK C+RYWT GG +RNVPVG G
Sbjct: 96 PCPRCSSMDTKFCYFNNYNVNQPRHFCKHCQRYWTAGGAMRNVPVGAGV 144
>Os01g0277500 Similar to Dof3 gene (Fragment)
Length = 490
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
PCPRC S +TKFCY+NNYN QPRHFC+ C+RYWT GG +RNVPVG G R+
Sbjct: 115 PCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRRRN 166
>Os02g0673700 Zinc finger, Dof-type family protein
Length = 375
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 42/47 (89%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGG 109
CPRC S +TKFCYYNNY+ QPR+FCK CRRYWT+GG+LRNVPVGGG
Sbjct: 76 CPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGG 122
>Os04g0678400 Zinc finger, Dof-type family protein
Length = 207
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 63 CPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPV 106
CPRC S +TKFCYYNNY+TSQPRHFC+ CRRYWT GGTLR+VPV
Sbjct: 52 CPRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPV 95
>Os01g0673700
Length = 175
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 35/43 (81%)
Query: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNV 104
PCPRC SR+TKFCY+NNYN QPRH C+ CRRYWT GG LR V
Sbjct: 85 PCPRCGSRETKFCYFNNYNVRQPRHLCRSCRRYWTAGGALRRV 127
>AB028133
Length = 235
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGG 99
PCPRC SRDTKFCY+NNYN +QPRHFCK C RYWT GG
Sbjct: 117 PCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGG 154
>Os10g0496000 Zinc finger, Dof-type family protein
Length = 247
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 66 CESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
C S +TKFCYYNNY+ +QPR+ CK CRR+WT+GGTLR+VPVGGG +
Sbjct: 83 CGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKN 129
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,187,864
Number of extensions: 282529
Number of successful extensions: 573
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 569
Number of HSP's successfully gapped: 30
Length of query: 276
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 177
Effective length of database: 11,866,615
Effective search space: 2100390855
Effective search space used: 2100390855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)