BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0695100 Os07g0695100|AK066112
(742 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0695100 CheY-like domain containing protein 1218 0.0
Os03g0284100 Two-component response regulator-like PRR73 (P... 702 0.0
Os09g0532400 CheY-like domain containing protein 175 1e-43
Os11g0157600 Similar to Timing of CAB expression 1 141 2e-33
Os02g0618200 CheY-like domain containing protein 112 1e-24
Os06g0183100 Similar to Two-component response regulator ARR14 97 4e-20
Os02g0796500 Similar to Two-component response regulator AR... 94 3e-19
Os02g0182100 Similar to Two-component response regulator ARR1 93 6e-19
Os03g0224200 Similar to Response regulator 8 93 8e-19
Os05g0395700 89 1e-17
Os06g0647200 CheY-like domain containing protein 89 1e-17
Os11g0143300 Similar to Type-A response regulator 77 4e-14
Os02g0830200 Similar to ZmRR2 protein (Response regulator 2) 77 6e-14
Os01g0952500 Similar to Two-component response regulator AR... 77 6e-14
Os04g0673300 Similar to ZmRR2 protein (Response regulator 2) 76 1e-13
Os07g0449700 75 1e-13
Os02g0631700 Similar to ZmRR2 protein (Response regulator 2) 75 2e-13
Os04g0524300 Similar to ZmRR2 protein (Response regulator 2) 75 2e-13
Os12g0139400 Similar to Type-A response regulator 72 1e-12
Os04g0442300 Similar to ZmRR2 protein (Response regulator 2) 68 3e-11
>Os07g0695100 CheY-like domain containing protein
Length = 742
Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/718 (83%), Positives = 602/718 (83%)
Query: 1 MMGTAHHNQTAGSALXXXXXXXXXXXXXXXXXXXXXXXXXXISGVQRPPQVCWERFIQKK 60
MMGTAHHNQTAGSAL ISGVQRPPQVCWERFIQKK
Sbjct: 1 MMGTAHHNQTAGSALGVGVGDANDAVPGAGGGGYSDPDGGPISGVQRPPQVCWERFIQKK 60
Query: 61 TIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGV 120
TIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGV
Sbjct: 61 TIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGV 120
Query: 121 SGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 180
SGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHV
Sbjct: 121 SGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 180
Query: 181 WRRCHXXXXXXXXXXIQTQKCAKSKXXXXXXXXXXXXXXXXXXXVIMGLNARDGSDNGSG 240
WRRCH IQTQKCAKSK VIMGLNARDGSDNGSG
Sbjct: 181 WRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDDGVIMGLNARDGSDNGSG 240
Query: 241 TQAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQ 300
TQAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQ
Sbjct: 241 TQAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQ 300
Query: 301 KETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRNEYPLQNNSKEAAMENLEESS 360
KETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRNEYPLQNNSKEAAMENLEESS
Sbjct: 301 KETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRNEYPLQNNSKEAAMENLEESS 360
Query: 361 VRAADLIGSMAKNMDXXXXXXXXXXPNCSSKVPEGKDKNRDNIMPSLELSLKRSRSTGDG 420
VRAADLIGSMAKNMD PNCSSKVPEGKDKNRDNIMPSLELSLKRSRSTGDG
Sbjct: 361 VRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDKNRDNIMPSLELSLKRSRSTGDG 420
Query: 421 ANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKS 480
ANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKS
Sbjct: 421 ANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKS 480
Query: 481 NSDAAPIKQXXXXXXXXXXXXXTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQHWT 540
NSDAAPIKQ TTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQHWT
Sbjct: 481 NSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQHWT 540
Query: 541 SPANTTGKEKTDEVANNAAKRAQPGEVQSNLVQHPRPILHYVHFDVSRENGGSGAPQCGS 600
SPANTTGKEKTDEVANNAAKRAQPGEVQSNLVQHPRPILHYVHFDVSRENGGSGAPQCGS
Sbjct: 541 SPANTTGKEKTDEVANNAAKRAQPGEVQSNLVQHPRPILHYVHFDVSRENGGSGAPQCGS 600
Query: 601 SNVFDPPVEGHAANYGVXXXXXXXXXXXXXXXXXTTAVNAERPNMEIAXXXXXXXXXXXX 660
SNVFDPPVEGHAANYGV TTAVNAERPNMEIA
Sbjct: 601 SNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGG 660
Query: 661 XXXXXXXXXDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVR 718
DMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVR
Sbjct: 661 NGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVR 718
>Os03g0284100 Two-component response regulator-like PRR73 (Pseudo-response
regulator 73) (OsPRR73)
Length = 767
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/687 (56%), Positives = 449/687 (65%), Gaps = 27/687 (3%)
Query: 51 VCWERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDL 110
V WERF+ KT++VLLV++DDSTRQVVSALLR C YEVIPAENG AW LED+QN IDL
Sbjct: 70 VRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDL 129
Query: 111 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRK 170
VLTEVVMP +SGI LLS+I +H ICK+IPVIMMSSND+MGTVFKCLSKGAVDFLVKPIRK
Sbjct: 130 VLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRK 189
Query: 171 NELKNLWQHVWRRCHXXXXXXXXXXIQTQKCAKSKXXXXXXXXXXX--------XXXXXX 222
NELKNLWQHVWRRCH I+TQKC K K
Sbjct: 190 NELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNEDDDDNDEDD 249
Query: 223 XXVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLKSD 282
+ +G NARDGSDNGSGT QSSWTKRAVEIDSPQ MSPDQ +D PDSTCAQVIH S+
Sbjct: 250 DDLSVGHNARDGSDNGSGT--QSSWTKRAVEIDSPQQMSPDQPSDLPDSTCAQVIHPTSE 307
Query: 283 ICSNRWLPCTSNKNSKKQKETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRNE- 341
ICSNRWLP + ++ KK KE NDD GK LEIG+PRN + YQSSP E S+ PT++++E
Sbjct: 308 ICSNRWLPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHET 367
Query: 342 -YPLQNNSKEAAMENLE-ESSVRAADLIGSMAKNMDXXXXXXXXXXPNCSSKVPEGKDKN 399
P ++E N + E + + DLI S+A++ D P+CSSKVP+G DKN
Sbjct: 368 LMPQSKTTRETDSRNTQNEPTTQTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKN 427
Query: 400 RDNI--MPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFM 457
RD++ M S EL LKR ++TG A I +E RN+L+RSDLSAFTRYHT VASNQGG GF
Sbjct: 428 RDSLIDMTSEELGLKRLKTTG-SATEIHDE-RNILKRSDLSAFTRYHTTVASNQGGAGFG 485
Query: 458 GSCSLHDNSSEAMKTDSAYNMKSNSDAAPIKQXXXXXXXXXXXXXTTKNVVTKPSTNKER 517
GSCS DNSSEA+KTDS +KSNSDAA IKQ +TKN +TKPS+N+ +
Sbjct: 486 GSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGK 545
Query: 518 VMSPSAVKANGHTSAFHPAQHWTSPANTTGKEKTDEVANNAAKRAQPGEVQSNLVQ---- 573
V+SPSAVKA HTSAFHP Q TSPAN GK+K DE N P +VQ++ +Q
Sbjct: 546 VISPSAVKATQHTSAFHPVQRQTSPANVVGKDKVDEGIANGVNVGHPVDVQNSFMQHHHH 605
Query: 574 --HPRPILHYVHFDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVXXXXXXXXXXXXXX 631
+ ++ S E G S A QCGSSNVFDPP+EGHAANY V
Sbjct: 606 VHYYVHVMTQQQQQPSIERGSSDA-QCGSSNVFDPPIEGHAANYSVNGSFSGGHNGNNGQ 664
Query: 632 XXXTTAVNAERPNMEIAXXXXXXXXXXXXXXXXXXXXXDMYLKRFTQREHRVAAVIKFRQ 691
+TA N RPNME D+Y RE AA+ KFRQ
Sbjct: 665 RGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSGSGNDLYQNGVCYRE---AALNKFRQ 721
Query: 692 KRKERNFGKKVRYQSRKRLAEQRPRVR 718
KRK RNFGKKVRYQSRKRLAEQRPR+R
Sbjct: 722 KRKVRNFGKKVRYQSRKRLAEQRPRIR 748
>Os09g0532400 CheY-like domain containing protein
Length = 623
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 98/129 (75%)
Query: 55 RFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTE 114
R + + ++VLL + DDSTR ++ ALLR C Y V A +G +AW L++ +IDLVLTE
Sbjct: 36 RMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTE 95
Query: 115 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 174
V +P +SG LLS IM H+ CKNIPVIMMSSND++ VFKC+ KGA DFLVKPIRKNEL+
Sbjct: 96 VELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELR 155
Query: 175 NLWQHVWRR 183
NLWQHVWR+
Sbjct: 156 NLWQHVWRK 164
>Os11g0157600 Similar to Timing of CAB expression 1
Length = 623
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 100/172 (58%), Gaps = 22/172 (12%)
Query: 96 QAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKC 155
+AW + + + DLVLTEV MP +SGI LLSRI+ + CKNIPVIMMSS D++GTV +C
Sbjct: 2 KAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRC 61
Query: 156 LSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXXIQTQKCAKSKXXXXXXXXXX 215
+ KGAVDFLVKP+RKNEL+NLWQHVWRR + +Q A
Sbjct: 62 MQKGAVDFLVKPVRKNELRNLWQHVWRR----------HAMNSQTNASENNAASNHLSAN 111
Query: 216 XXXXXXXXXVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSPDQLAD 267
G ++ G + + AQSS +KR VEI S + + P+ +AD
Sbjct: 112 G-----------GNGSKTGEHSDEESDAQSSGSKREVEIQSAEKL-PEVVAD 151
>Os02g0618200 CheY-like domain containing protein
Length = 518
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%)
Query: 56 FIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEV 115
F+ + +++LL DSD S+ + V LL +C Y+V A++ +Q L ID++L EV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 116 VMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKN 175
+P +L I + ++IP+IMMS+ D + V KCL GA ++LVKP+R NEL N
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 176 LWQHVWRR 183
LW HVWRR
Sbjct: 142 LWTHVWRR 149
>Os06g0183100 Similar to Two-component response regulator ARR14
Length = 696
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
++VL VD D +V+ LLR C Y V A L + ++ DLV+++V MP +
Sbjct: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMD 85
Query: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
G LL + + ++PVIM+S N TV K ++ GA D+L+KP+R EL+N+WQHV
Sbjct: 86 GFKLLELV---GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVV 142
Query: 182 RR 183
RR
Sbjct: 143 RR 144
>Os02g0796500 Similar to Two-component response regulator ARR11 (Receiver-like
protein 3)
Length = 688
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
++VL VD D +V+ LL C Y V A L + ++ DLV+++V MP +
Sbjct: 24 MRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDVHMPDMD 83
Query: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
G LL + + ++PVIM+S N TV K ++ GA D+L+KP+R EL+N+WQHV
Sbjct: 84 GFKLLELV---GLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQHVI 140
Query: 182 RR 183
RR
Sbjct: 141 RR 142
>Os02g0182100 Similar to Two-component response regulator ARR1
Length = 626
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
++VL VD D + +++ LL C Y V A L + ++ DLV+++V MP +
Sbjct: 29 MRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPDMD 88
Query: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
G LL + + ++PVIM+S+N TV K ++ GA D+L+KP+R +L+ +WQHV
Sbjct: 89 GFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVI 145
Query: 182 RR 183
RR
Sbjct: 146 RR 147
>Os03g0224200 Similar to Response regulator 8
Length = 691
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
+KVL+VD D + V+ +L C Y+ +A T L + + D+++++V MP +
Sbjct: 16 MKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMPDMD 75
Query: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
G LL + + ++PVIMMS++ V K + GA D+L+KP+R ELKN+WQHV
Sbjct: 76 GFRLLELV---GLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVI 132
Query: 182 RR 183
R+
Sbjct: 133 RK 134
>Os05g0395700
Length = 368
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 21/140 (15%)
Query: 62 IKVLLVDSDDSTRQVVSALLRHCMY-----------------EVIPAENGQQAWTYLEDM 104
++VLL+D + ++++ LL +C Y EV P + A L +
Sbjct: 25 MRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARDAVEELHEN 84
Query: 105 QNSIDLVLTEVVMP-GVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDF 163
S D+VLTEV P G+ G +LL ++PV++ S++D TV KC++ GA D+
Sbjct: 85 PWSYDMVLTEVHAPAGIDGFNLLQYAGTD---MDLPVVVFSADDDKRTVLKCVNSGACDY 141
Query: 164 LVKPIRKNELKNLWQHVWRR 183
LVKP+R ELKN+WQHV+RR
Sbjct: 142 LVKPLRHEELKNIWQHVYRR 161
>Os06g0647200 CheY-like domain containing protein
Length = 663
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
++VL VD ++ ALLR C Y+ + A L + DLV+++V M +
Sbjct: 31 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 90
Query: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
G LL I + ++PVIM S+N + T+ K ++ GA D+LVKP+ +++N+WQHVW
Sbjct: 91 GFKLLELI---GLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 147
Query: 182 RR 183
R+
Sbjct: 148 RK 149
>Os11g0143300 Similar to Type-A response regulator
Length = 201
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 15/136 (11%)
Query: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL--EDMQNS------------ID 109
VL VD R+++ LL+ ++V ++G +A +L D ++S ++
Sbjct: 11 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAVN 70
Query: 110 LVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 169
L++T+ MPG++G LL +I + ++IPV++MSS++ + +CL +GA +F +KP+R
Sbjct: 71 LIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVR 130
Query: 170 KNELKNLWQHVWR-RC 184
+++ L H+ + RC
Sbjct: 131 LSDMSKLKPHILKSRC 146
>Os02g0830200 Similar to ZmRR2 protein (Response regulator 2)
Length = 131
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGI 123
VL VD R V+S LLR Y V ++G++A L + ++ +++T+ MP ++G
Sbjct: 13 VLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLS-LDRNVHMIITDYCMPEMTGF 71
Query: 124 SLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 180
LL R+ K IPV++MSS ++ + +CL +GA DFL+KP+R +++ L V
Sbjct: 72 DLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKPVRPSDVSRLCNRV 128
>Os01g0952500 Similar to Two-component response regulator ARR9 (Response reactor
4)
Length = 232
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 18/138 (13%)
Query: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL------------------EDMQ 105
VL VD R+++ LL++ Y+V ++G +A L + +
Sbjct: 12 VLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPDHQE 71
Query: 106 NSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLV 165
++L++T+ MPG++G LL R+ + K+IPV++MSS + + +CL GA +F +
Sbjct: 72 IDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFFL 131
Query: 166 KPIRKNELKNLWQHVWRR 183
KP++ ++K L H+ +R
Sbjct: 132 KPVKLADMKKLKSHLLKR 149
>Os04g0673300 Similar to ZmRR2 protein (Response regulator 2)
Length = 170
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Query: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-EDMQNSIDLVLTEVVMPGVSG 122
VL VD R V++ +LR Y V E+ +A L + ++++++T+ MPG++G
Sbjct: 52 VLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVPNVNMIITDYWMPGMTG 111
Query: 123 ISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 180
LL R+ + K IPV++MSS + + +CL +GA DFL+KP+R +++ L +
Sbjct: 112 YELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRLCSRI 169
>Os07g0449700
Length = 212
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGI 123
V+ VD R V++ALLR Y V ++G++A L N + +++T+ MP ++G
Sbjct: 95 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEPN-VSMIITDYWMPEMTGY 153
Query: 124 SLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNL 176
LL +I + K IPV++MSS + + +CL +GA DFL+KP+R ++ +
Sbjct: 154 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 206
>Os02g0631700 Similar to ZmRR2 protein (Response regulator 2)
Length = 147
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGI 123
VL VD R V++ +LR + V ++G++A L N + +++T+ MP ++G
Sbjct: 30 VLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGSEPN-VSMIITDYWMPEMTGY 88
Query: 124 SLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 180
LL ++ + K IPV++MSS + + +CL +GA DFLVKP+R +++ L+ V
Sbjct: 89 ELLKKVKESSKLKKIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRLFSRV 145
>Os04g0524300 Similar to ZmRR2 protein (Response regulator 2)
Length = 134
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGI 123
VL VD R V+S +LR + V ++G++A L N + +++T+ MP ++G
Sbjct: 17 VLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEPN-VSMIITDYWMPEMTGY 75
Query: 124 SLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 182
LL ++ + K IPV++MSS + + +CL +GA DFL+KP++ +++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLR 134
>Os12g0139400 Similar to Type-A response regulator
Length = 201
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 15/136 (11%)
Query: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL--EDMQNS------------ID 109
VL VD R+++ LL+ ++V ++G +A +L D ++S ++
Sbjct: 11 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVGVN 70
Query: 110 LVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 169
L++T+ MPG++G LL +I + ++IPV++MSS++ + +CL +GA +F +KP+R
Sbjct: 71 LIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVR 130
Query: 170 KNELKNLWQHVWR-RC 184
+++ L H+ + RC
Sbjct: 131 LSDMSKLKPHILKSRC 146
>Os04g0442300 Similar to ZmRR2 protein (Response regulator 2)
Length = 262
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 63 KVLLVDSDDSTRQVVSALLRH--CM--YEVIPAENGQQAWTYL----EDMQNSIDLVLTE 114
+VLLVD R+VV LL C + VI ++ ++A +L E + +ID+VLT+
Sbjct: 40 RVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQAIDMVLTD 99
Query: 115 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 174
MP ++G LL I + K IPVI+MSS + + +C++ GA DF+VKP++ +++
Sbjct: 100 YCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQSKDVQ 159
Query: 175 NL 176
L
Sbjct: 160 RL 161
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.126 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,922,936
Number of extensions: 795082
Number of successful extensions: 1728
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 1714
Number of HSP's successfully gapped: 20
Length of query: 742
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 634
Effective length of database: 11,396,689
Effective search space: 7225500826
Effective search space used: 7225500826
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 160 (66.2 bits)