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Os07g0695100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CheY-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0373) R2 : 0.92
β1 : -1.06 (0.137) R2dD : 0.00975 R2D : 0.0226
β2 : 1.54 (0.126) R2dC : 0.0547 R2C : 0.301
β3 : -6.72 (0.163) R2dE : 0.599 R2E : 0.851
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.243 (0.0799) R2dN8 : 0.00208 R2N8 : -0.00181
σ : 0.697
deviance : 223.64
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_____
C
peak time of C : 13.6
E
wheather : temperature
threshold : 13.31
memory length : 226
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 22.6
open length of G : 5.88

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
226.52 0.707 11.1 -1.1 1.47 -6.95 -0.21 -1.9 0.258 13.4 13.83 257 22.2 6.02
225.81 0.7 11 -0.987 1.45 -6.85 0.101 -- 0.291 13.2 13.34 240 22.4 6.05
223.34 0.696 11.1 -1.07 1.37 -6.82 -- -1.32 0.228 13.2 12.82 241 22.4 6.1
223.64 0.697 11.1 -1.06 1.54 -6.72 -- -- 0.243 13.6 13.31 226 22.6 5.88
268.71 0.763 11.1 -0.878 -- -7.58 -- -0.617 0.302 -- 10.65 199 22.3 6.55
771.18 1.3 11.2 -1.53 5.81 -- 2.36 -- -0.0599 15.1 -- -- -- --
789.55 1.32 11.2 -1.48 5.82 -- -- -- -0.0461 15.1 -- -- -- --
268.86 0.764 11.1 -0.944 -- -7.66 -- -- 0.25 -- 10.49 199 22.3 6.52
249.57 0.736 11 -- 1.63 -6.73 -- -- 0.33 13.6 13.58 222 22.6 5.87
2726.3 2.44 11.2 -1.72 -- -- -- -- -0.198 -- -- -- -- --
846.98 1.36 11.1 -- 5.85 -- -- -- 0.118 15.1 -- -- -- --
292.98 0.797 11 -- -- -7.82 -- -- 0.322 -- 10.67 208 22.2 6.48
2804.72 2.47 11.1 -- -- -- -- -- -0.00629 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 237.80 temperature 15.0 270 > th dose dependent rect. 22 6
6 255.44 radiation 1.0 90 < th dose dependent sin 6 NA
18 276.01 temperature 10.0 90 > th dose dependent rect. 11 18
20 277.60 temperature 20.0 90 > th dose independent rect. 24 5
24 285.51 humidity 60.0 90 > th dose dependent rect. 24 5
30 290.83 wind 9.0 90 < th dose dependent rect. 24 5
37 293.42 radiation 1.0 90 > th dose independent sin 6 NA
38 293.58 radiation 1.0 90 < th dose independent sin 6 NA
40 295.80 humidity 80.0 90 > th dose independent rect. 24 5
41 296.34 wind 9.0 270 < th dose dependent rect. 24 3
43 296.88 radiation 1.0 90 < th dose dependent rect. 1 5
54 301.49 wind 3.0 90 < th dose independent rect. 24 5
57 302.19 radiation 1.0 90 < th dose independent rect. 24 6
60 303.87 temperature 10.0 270 > th dose dependent rect. 9 19
62 304.39 atmosphere 1010.0 270 < th dose independent rect. 23 5
67 306.16 radiation 10.0 10 < th dose dependent rect. 24 6
76 306.80 precipitation 0.1 270 < th dose independent rect. 24 3
77 306.80 precipitation 0.1 270 < th dose dependent rect. 24 3
80 307.16 atmosphere 1010.0 270 < th dose independent rect. 24 3
82 307.28 wind 7.0 270 < th dose independent rect. 24 3
88 307.66 temperature 30.0 270 < th dose independent rect. 24 3
89 307.66 humidity 50.0 270 > th dose independent rect. 24 3
92 307.66 atmosphere 995.0 270 > th dose independent rect. 24 3
93 307.66 radiation 1.0 270 < th dose independent rect. 24 3
98 307.66 temperature 10.0 270 > th dose independent rect. 3 21
130 309.83 temperature 10.0 90 > th dose independent rect. 5 20
147 312.69 wind 9.0 90 < th dose independent rect. 5 20
168 313.94 wind 9.0 270 < th dose independent rect. 3 21
200 322.53 temperature 20.0 90 > th dose independent rect. 11 18
250 330.98 atmosphere 995.0 90 > th dose independent rect. 5 19
258 332.09 precipitation 0.1 270 < th dose independent rect. 3 21
259 332.09 precipitation 0.1 270 < th dose dependent rect. 3 21
261 332.89 precipitation 0.1 90 < th dose independent rect. 5 19
262 332.89 precipitation 0.1 90 < th dose dependent rect. 5 19
291 340.91 humidity 50.0 270 > th dose dependent rect. 1 1
301 342.73 atmosphere 1015.0 90 < th dose dependent rect. 1 4
312 344.53 atmosphere 1010.0 90 < th dose independent rect. 11 18
316 344.91 wind 9.0 10 < th dose dependent rect. 24 6
353 349.24 precipitation 0.1 270 < th dose independent rect. 1 1
354 349.24 precipitation 0.1 270 < th dose dependent rect. 1 1
360 350.34 temperature 10.0 270 > th dose independent rect. 1 1
362 350.34 temperature 30.0 270 < th dose independent rect. 1 1
363 350.34 humidity 50.0 270 > th dose independent rect. 1 1
366 350.34 atmosphere 995.0 270 > th dose independent rect. 1 1
367 350.34 atmosphere 1010.0 270 < th dose independent rect. 1 1
369 350.34 radiation 1.0 270 < th dose independent rect. 1 1
374 350.34 temperature 10.0 270 > th dose independent rect. 2 23
375 350.34 radiation 1.0 270 < th dose dependent rect. 1 1
380 350.36 wind 9.0 270 < th dose independent rect. 1 1
440 356.46 atmosphere 995.0 270 > th dose independent rect. 3 21
454 358.23 wind 1.0 270 > th dose independent rect. 24 3
464 359.65 atmosphere 1010.0 10 < th dose independent rect. 24 6
467 360.30 radiation 40.0 270 < th dose independent rect. 14 10
495 361.58 humidity 80.0 10 > th dose independent rect. 24 6
498 361.82 atmosphere 1010.0 90 < th dose independent rect. 13 16
566 366.20 wind 9.0 10 < th dose independent rect. 24 6
568 366.20 temperature 30.0 10 < th dose independent rect. 24 6
569 366.20 humidity 50.0 10 > th dose independent rect. 24 6
572 366.20 atmosphere 995.0 10 > th dose independent rect. 24 6
576 366.20 temperature 10.0 10 > th dose independent rect. 6 18
595 368.82 wind 9.0 10 < th dose independent rect. 6 18
646 371.23 precipitation 0.1 90 < th dose independent rect. 5 6
647 371.23 precipitation 0.1 90 < th dose dependent rect. 5 6
652 371.96 temperature 10.0 90 > th dose independent rect. 5 6
653 371.96 atmosphere 995.0 90 > th dose independent rect. 5 6
654 371.96 atmosphere 1015.0 90 < th dose independent rect. 5 6
665 372.73 atmosphere 1015.0 270 < th dose independent rect. 24 15
668 373.08 temperature 10.0 270 > th dose independent rect. 15 9
669 373.08 temperature 10.0 270 > th dose independent rect. 24 15
675 373.77 wind 9.0 90 < th dose independent rect. 5 6
697 375.31 wind 9.0 270 < th dose independent rect. 24 15
703 375.60 humidity 50.0 90 > th dose independent rect. 5 19
721 376.21 wind 9.0 90 < th dose independent rect. 11 18
722 376.31 wind 9.0 270 < th dose independent rect. 15 9
723 376.36 precipitation 0.1 270 < th dose independent rect. 24 15
724 376.36 precipitation 0.1 270 < th dose dependent rect. 24 15
731 376.97 precipitation 0.1 10 < th dose independent rect. 6 18
732 376.97 precipitation 0.1 10 < th dose dependent rect. 6 18
738 377.20 atmosphere 995.0 270 > th dose independent rect. 24 15
789 379.16 humidity 50.0 90 > th dose independent rect. 5 6
800 379.95 precipitation 0.1 10 < th dose independent rect. 24 6
801 379.95 precipitation 0.1 10 < th dose dependent rect. 24 6
834 381.59 temperature 30.0 270 < th dose independent rect. 4 6
836 381.86 radiation 1.0 90 > th dose independent rect. 4 7
856 382.58 atmosphere 995.0 10 > th dose independent rect. 6 18
920 385.31 precipitation 0.1 90 < th dose independent rect. 11 18
921 385.31 precipitation 0.1 90 < th dose dependent rect. 11 18
925 385.48 temperature 10.0 1440 > th dose independent rect. 1 6
928 385.48 temperature 30.0 1440 < th dose independent rect. 1 6
932 385.48 humidity 50.0 1440 > th dose independent rect. 1 6
937 385.48 atmosphere 995.0 1440 > th dose independent rect. 1 6
938 385.48 radiation 40.0 1440 < th dose independent rect. 1 6
942 385.48 temperature 10.0 1440 > th dose independent rect. 7 18
964 387.14 wind 9.0 90 < th dose independent rect. 5 8
984 388.60 precipitation 0.1 90 < th dose independent rect. 5 8
985 388.60 precipitation 0.1 90 < th dose dependent rect. 5 8
990 389.10 temperature 10.0 90 > th dose independent rect. 5 8
991 389.10 atmosphere 995.0 90 > th dose independent rect. 5 8
992 389.10 atmosphere 1015.0 90 < th dose independent rect. 5 8