BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0183100 Os06g0183100|AK102959
(696 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0183100 Similar to Two-component response regulator ARR14 1289 0.0
Os02g0796500 Similar to Two-component response regulator AR... 703 0.0
Os02g0182100 Similar to Two-component response regulator ARR1 370 e-102
Os03g0224200 Similar to Response regulator 8 296 4e-80
Os06g0647200 CheY-like domain containing protein 269 6e-72
Os05g0395700 139 5e-33
Os10g0463400 119 7e-27
Os03g0284100 Two-component response regulator-like PRR73 (P... 100 3e-21
Os09g0532400 CheY-like domain containing protein 99 1e-20
Os07g0695100 CheY-like domain containing protein 98 2e-20
Os05g0412000 Similar to Two-component response regulator ARR14 94 2e-19
Os05g0395600 92 1e-18
Os01g0971800 Similar to Two-component response regulator AR... 91 4e-18
Os01g0239000 Similar to Phosphate starvation regulator prot... 89 1e-17
Os02g0618200 CheY-like domain containing protein 87 5e-17
Os01g0844900 Homeodomain-like containing protein 87 5e-17
Os06g0348800 Homeodomain-like containing protein 84 3e-16
Os11g0157600 Similar to Timing of CAB expression 1 82 1e-15
Os02g0830200 Similar to ZmRR2 protein (Response regulator 2) 69 9e-12
Os07g0119300 Twin-arginine translocation pathway signal dom... 67 4e-11
Os07g0449700 67 6e-11
>Os06g0183100 Similar to Two-component response regulator ARR14
Length = 696
Score = 1289 bits (3335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/696 (90%), Positives = 631/696 (90%)
Query: 1 MLLGALRMEERKGLMGRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAIT 60
MLLGALRMEERKGLMGRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAIT
Sbjct: 1 MLLGALRMEERKGLMGRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAIT 60
Query: 61 ALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHG 120
ALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHG
Sbjct: 61 ALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHG 120
Query: 121 ACDYLLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSS 180
ACDYLLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSS
Sbjct: 121 ACDYLLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSS 180
Query: 181 DQNGRSSRKRKELHXXXXXXXXXXXXXXXXXPSAAKKPRVVWSVELHRKFVAAVNQLGID 240
DQNGRSSRKRKELH PSAAKKPRVVWSVELHRKFVAAVNQLGID
Sbjct: 181 DQNGRSSRKRKELHGEDDDEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGID 240
Query: 241 KAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLGXXXXXXXXXXXXFGGRDPSFLHIG 300
KAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLG FGGRDPSFLHIG
Sbjct: 241 KAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIG 300
Query: 301 AFEGLQSYQPFAPSAALPSFNPHGLLTRTSXXXXXXXXXXXXPSSTIQTSTGNVTVGHCL 360
AFEGLQSYQPFAPSAALPSFNPHGLLTRTS PSSTIQTSTGNVTVGHCL
Sbjct: 301 AFEGLQSYQPFAPSAALPSFNPHGLLTRTSAAAAFGLQELAAPSSTIQTSTGNVTVGHCL 360
Query: 361 EENQQANLAQGLTAAIGQPQLQQNWIHQEGNGLSDVFXXXXXXXXXXXXXQRVPSSSLPP 420
EENQQANLAQGLTAAIGQPQLQQNWIHQEGNGLSDVF QRVPSSSLPP
Sbjct: 361 EENQQANLAQGLTAAIGQPQLQQNWIHQEGNGLSDVFSGSSLTNTLSSTLQRVPSSSLPP 420
Query: 421 QELLECKQAKVSMXXXXXXXXXXXALLERTLGVSTNLGDSSISQQGALPIDGGFSADRLP 480
QELLECKQAKVSM ALLERTLGVSTNLGDSSISQQGALPIDGGFSADRLP
Sbjct: 421 QELLECKQAKVSMPPSIRIPPSSSALLERTLGVSTNLGDSSISQQGALPIDGGFSADRLP 480
Query: 481 LHSSFDGAVATKLDTSLAASQREIGQQGKFSVSMLVSPSDNLALAKNAKTGASSSGSTII 540
LHSSFDGAVATKLDTSLAASQREIGQQGKFSVSMLVSPSDNLALAKNAKTGASSSGSTII
Sbjct: 481 LHSSFDGAVATKLDTSLAASQREIGQQGKFSVSMLVSPSDNLALAKNAKTGASSSGSTII 540
Query: 541 LPLDTARHSDYLQFGGASNSLQKMDGQKQDHIQSSNIIWSSMPSTQLPSDTQIHNTQNQR 600
LPLDTARHSDYLQFGGASNSLQKMDGQKQDHIQSSNIIWSSMPSTQLPSDTQIHNTQNQR
Sbjct: 541 LPLDTARHSDYLQFGGASNSLQKMDGQKQDHIQSSNIIWSSMPSTQLPSDTQIHNTQNQR 600
Query: 601 LDSGSFNHNIGAHLADQTNASASILPQMKFDTRISEEKMKQKNTYDLGSSKLQGGFNSSG 660
LDSGSFNHNIGAHLADQTNASASILPQMKFDTRISEEKMKQKNTYDLGSSKLQGGFNSSG
Sbjct: 601 LDSGSFNHNIGAHLADQTNASASILPQMKFDTRISEEKMKQKNTYDLGSSKLQGGFNSSG 660
Query: 661 CNFDGLLNSIIKVEKDDLPFMDNELGCDLFPLGACI 696
CNFDGLLNSIIKVEKDDLPFMDNELGCDLFPLGACI
Sbjct: 661 CNFDGLLNSIIKVEKDDLPFMDNELGCDLFPLGACI 696
>Os02g0796500 Similar to Two-component response regulator ARR11 (Receiver-like
protein 3)
Length = 688
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/703 (55%), Positives = 460/703 (65%), Gaps = 34/703 (4%)
Query: 9 EERKGLM--GRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLR 66
EERKG++ R RDQFPVGMRVLAVDDDPVCLKVLETLL RCQYHVT+TNQA ALK+LR
Sbjct: 5 EERKGVVPAARRRDQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLR 64
Query: 67 ENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLL 126
ENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTV+KGITHGACDYLL
Sbjct: 65 ENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLL 124
Query: 127 KPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRS 186
KPVRIEELRNIWQHV+RRKF R+R NLDF +ECNKP +AD+DH TCGS DQ+GR
Sbjct: 125 KPVRIEELRNIWQHVIRRKFSTRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRP 184
Query: 187 SRKRKELHXXXXXXXXXXXXXXXXXPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKR 246
S+KRKE + PSA KKPRVVWSVELHRKFVAAVNQLGIDKAVPKR
Sbjct: 185 SKKRKE-YCSEEEDEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKR 243
Query: 247 ILELMNVEKLTRENVASHLQKYRLYLKRLGXXXXXXXXXXXXFGGRDPSFLHIGAFEGLQ 306
ILELMNVEKLTRENVASHLQKYRLYLKRL GGRDP FLH+G FEGLQ
Sbjct: 244 ILELMNVEKLTRENVASHLQKYRLYLKRLSAVASQQVSIVAALGGRDP-FLHMGGFEGLQ 302
Query: 307 SYQPFAPSAALPSFNPHGLLTRTSXXXXXXXXXXXXPSSTIQTSTGNVTVGHCLEE---- 362
YQ F SAAL SF PHGLL S +IQT +G+ T+ H + +
Sbjct: 303 GYQAFTSSAALSSFTPHGLLNSPRNNPAALGTQGVPASKSIQTMSGSHTLSHSINDANKY 362
Query: 363 ------NQQANLAQGLTAAIGQPQLQQNWIHQEGNGLSDVFXXXXXXXXXXXXXQRVPSS 416
NQ+ NL QGL ++GQ Q+QQ WIH+E + LS + Q V SS
Sbjct: 363 HLSLPGNQKGNLGQGLATSLGQTQMQQKWIHEETDDLSTILSGNGLSNGMSGTLQSVTSS 422
Query: 417 SLPPQELLECKQAKVSMXXXXXXXXXXXALLERTLGVSTNLGDSSISQQGALPIDGGFSA 476
L PQEL EC QAK+ +E +GVS+ L +S +SQQ +P+ GFSA
Sbjct: 423 PLLPQELAECTQAKIVSQPSIRTSSVSSEHIEGAVGVSSGLLESRVSQQSTIPLS-GFSA 481
Query: 477 DRLPLHSSFDGAVATKLDTSLAASQREIGQQGKFSVSMLVSPSDNLALAKNAKTGASSSG 536
+ L +H SF+ A KL G S S++L +A++ K GASS G
Sbjct: 482 NGLLIHGSFNNTCANKLG-------------GTSSSCAPARSSNDLMVARDTKGGASSFG 528
Query: 537 STIILPLDTARHSDYLQFGGASNSLQKMDGQKQDHIQSSNIIWSSMPSTQLPSDTQIHNT 596
++LP DT + YL FGG + QK D + D + +WSS+PS+QL S+ H+
Sbjct: 529 GAMLLPPDTEQK--YLNFGGGNGLKQKFDDRTADSLFDLKFVWSSVPSSQLASNIGAHHA 586
Query: 597 QNQRL-DSGSFNHNIGAHLADQTNASAS-ILPQMKFDTRISEEKMKQKNTYDLGSSKLQG 654
+QR +S S + NIGA + Q +S S ++PQMK D +S + KN DL KLQ
Sbjct: 587 MSQRWNNSSSNSSNIGARMIGQATSSGSTVIPQMKTDFLVSGDMAMPKNASDLSIPKLQS 646
Query: 655 GFNSSGCNFDGLLNSIIKVEKDDLPFMDNELGC-DLFPLGACI 696
+SS C+FDGLLNSI+KVEKDD+ F D +LGC D + LGACI
Sbjct: 647 ELSSSSCSFDGLLNSIVKVEKDDVTFSD-DLGCGDFYSLGACI 688
>Os02g0182100 Similar to Two-component response regulator ARR1
Length = 626
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/312 (60%), Positives = 218/312 (69%), Gaps = 13/312 (4%)
Query: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
DQFPVGMRVLAVDDDP CLK+LE LL RCQYHVT+T QA TALKLLREN+D FDLVISDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
HMPDMDGFKLLELVGLEMDLPVIMLS NGET+TVMKGITHGACDYLLKPVR+E+LR IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 140 HVVRRKFGNRERNNLDFSKECNKPQSADTDHG-PYQPTCGSSDQNGRSSRKRKELHXXXX 198
HV+RRK N D N + G + +++N R SRK ++
Sbjct: 143 HVIRRK-------NCDAKNRGNDDDAGQKAQGMNNEGESIGANRNKRQSRKSRD-ENGDD 194
Query: 199 XXXXXXXXXXXXXPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTR 258
S KKPRVVWSVELHRKFVAAVNQLGI+KAVPK+IL+LMNVE +TR
Sbjct: 195 GDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITR 254
Query: 259 ENVASHLQKYRLYLKRLGXXXXXXXXXXXXFGGRDPSFLHIGAFEGLQSYQPF--APSAA 316
ENVASHLQKYRLYLKRL FGGR+P+++++ +F +Y + P+A
Sbjct: 255 ENVASHLQKYRLYLKRLSTDASRQANLAAAFGGRNPAYINMNSFGNYNAYGRYRTVPTAG 314
Query: 317 LPSFNPHGLLTR 328
N +LTR
Sbjct: 315 HTQAN--NILTR 324
>Os03g0224200 Similar to Response regulator 8
Length = 691
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/259 (57%), Positives = 182/259 (70%), Gaps = 13/259 (5%)
Query: 21 QFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVH 80
+FPVGM+VL VDDDP CL VL+ +L C+Y T+ +QA AL +LRENR FD++ISDVH
Sbjct: 11 EFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVH 70
Query: 81 MPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQH 140
MPDMDGF+LLELVGLEMDLPVIM+S + T VMKGI HGACDYL+KPVR+EEL+NIWQH
Sbjct: 71 MPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 141 VVRRKFG-NRER---NNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHXX 196
V+R+KF N+E +LD + +P + D ++ +S N + K
Sbjct: 131 VIRKKFNENKEHEHSGSLD-DTDRTRPTNNDNEY--------ASSANDGAEGSWKSQKKK 181
Query: 197 XXXXXXXXXXXXXXXPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKL 256
S +KKPRVVWSVELH++FV AVN LGIDKAVPK+ILELMNV L
Sbjct: 182 RDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGL 241
Query: 257 TRENVASHLQKYRLYLKRL 275
TRENVASHLQK+RLYLKR+
Sbjct: 242 TRENVASHLQKFRLYLKRI 260
>Os06g0647200 CheY-like domain containing protein
Length = 663
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/259 (52%), Positives = 170/259 (65%), Gaps = 29/259 (11%)
Query: 21 QFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVH 80
+FP G+RVLAVDD PVCL +LE LLRRC+Y T T A TAL++LRE FDLVISDVH
Sbjct: 26 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 85
Query: 81 MPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQH 140
M DMDGFKLLEL+GLEMDLPVIM S NGE +T+MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 86 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 145
Query: 141 VVR-RKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGR---SSRKRKELHXX 196
V R RK R N G + G ++R +++
Sbjct: 146 VWRKRKLDIRNHN-------------------------GGYNDGGELVGATRTKRKYTRK 180
Query: 197 XXXXXXXXXXXXXXXPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKL 256
S K+ RVVW+ ELHR FV AV++LG+D+AVP++IL +M V+ +
Sbjct: 181 MRNDGDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYM 240
Query: 257 TRENVASHLQKYRLYLKRL 275
TREN+ASHLQKYRLYLKR+
Sbjct: 241 TRENIASHLQKYRLYLKRI 259
>Os05g0395700
Length = 368
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 131/272 (48%), Gaps = 80/272 (29%)
Query: 23 PVGMRVLAVDDDPVCLKVLETLLRRCQYH-VTSTNQAIT----------------ALKLL 65
PVGMRVL +D+ LK++ LL C Y +T TN IT A++ L
Sbjct: 22 PVGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARDAVEEL 81
Query: 66 RENRDMFDLVISDVHMP-DMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDY 124
EN +D+V+++VH P +DGF LL+ G +MDLPV++ S + + +TV+K + GACDY
Sbjct: 82 HENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDY 141
Query: 125 LLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNG 184
L+KP+R EEL+NIWQHV RRK G G+S +
Sbjct: 142 LVKPLRHEELKNIWQHVYRRKL---------------------RSGGRRAAAAGNSSKGE 180
Query: 185 RSSRKR--KELHXXXXXXXXXXXXXXXXXPSAAKKPRVVWSVELHRKFVAAVNQLGIDKA 242
R R KELH +FV+ V QLG+DKA
Sbjct: 181 IKKRFRWPKELH---------------------------------ERFVSVVLQLGVDKA 207
Query: 243 VPKRILELMNVEKLTRENVASHLQKYRLYLKR 274
P +IL L+N E LTR+ Q++R+ L +
Sbjct: 208 TPNQILPLLNREDLTRD------QRFRIALTK 233
>Os10g0463400
Length = 256
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 11/176 (6%)
Query: 104 LSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKP 163
++ +G+T TVMK + +GA D+LLKPVRIEEL NIWQH+ R++ + + NN+ + E KP
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLE--KP 58
Query: 164 QSADTDHGPYQPTCGSSDQNGRSSRKRKELHXXXXXXXXXXXXXXXXXPSAAK--KPRVV 221
+ + T ++ RS+ L K R+
Sbjct: 59 GHPPSILAMARATPATT----RSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLT 114
Query: 222 WSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQ---KYRLYLKR 274
W+ +LHR+F+AAVN LG DKAVPK+IL +M V+ LTRE VASHLQ KYR+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQVHIKYRMQLKK 170
>Os03g0284100 Two-component response regulator-like PRR73 (Pseudo-response
regulator 73) (OsPRR73)
Length = 767
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMD 85
+RVL V++D +V+ LLR+C Y V + A + L + ++ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 86 GFKLLELV---GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVV 142
G LL + + D+PVIM+S N TV K ++ GA D+L+KP+R EL+N+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 143 RR 144
RR
Sbjct: 201 RR 202
>Os09g0532400 CheY-like domain containing protein
Length = 623
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 17 RERDQFP-VGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLV 75
RE P + +RVL + D ++ LLR+C Y V + + + A +L+E DLV
Sbjct: 33 RETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLV 92
Query: 76 ISDVHMPDMDGFKLLELVGLEMD----LPVIMLSVNGETKTVMKGITHGACDYLLKPVRI 131
+++V +P M GF LL + +E D +PVIM+S N V K + GA D+L+KP+R
Sbjct: 93 LTEVELPLMSGFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRK 151
Query: 132 EELRNIWQHVVRRKF 146
ELRN+WQHV R++
Sbjct: 152 NELRNLWQHVWRKQL 166
>Os07g0695100 CheY-like domain containing protein
Length = 742
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMD 85
++VL VD D +V+ LLR C Y V A L + ++ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 86 GFKLLELV---GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVV 142
G LL + + ++PVIM+S N TV K ++ GA D+L+KP+R EL+N+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 143 RR 144
RR
Sbjct: 182 RR 183
>Os05g0412000 Similar to Two-component response regulator ARR14
Length = 331
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 52/60 (86%)
Query: 216 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRL 275
K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V+ LTRENVASHLQKYRLYLKR+
Sbjct: 109 KRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM 168
>Os05g0395600
Length = 620
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 11/135 (8%)
Query: 13 GLMGRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLREN-RDM 71
G GR + VL VDDD L+ L+ +L Y VT A ALK + +N D
Sbjct: 18 GFFGR--------LHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDY 69
Query: 72 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRI 131
F +V++DVHM MDGF LL + +PVIM S + VM+ + +GACDY++KP+
Sbjct: 70 FHIVMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTS 127
Query: 132 EELRNIWQHVVRRKF 146
E ++ IW+HV+R +
Sbjct: 128 EAIKFIWKHVLRWRL 142
>Os01g0971800 Similar to Two-component response regulator ARR11 (Receiver-like
protein 3)
Length = 238
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 50/60 (83%)
Query: 216 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRL 275
K+ R+VW+ +LH++FV V LG+ AVPK I++LMNVE LTRENVASHLQKYRLY+KR+
Sbjct: 117 KRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRM 176
>Os01g0239000 Similar to Phosphate starvation regulator protein (Regulatory
protein of P- starvation acclimation response Psr1)
Length = 539
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%)
Query: 216 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRL 275
+K +V W+ ELHR+FV AV QLGIDKAVP RILELM +E LTR N+ASHLQKYR + K L
Sbjct: 214 RKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKHL 273
>Os02g0618200 CheY-like domain containing protein
Length = 518
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMD 85
+R+L D DP + + LL C Y VT + +L D+++++V +P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 86 GFKLLELVGLEMDL---PVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVV 142
FK+L+ + +L P+IM+S E V+K + GA +YL+KP+R+ EL N+W HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 143 RRK--FGNRERN--NLDFSKECNKPQSADTD 169
RR+ G E+N N +F ++P A+T+
Sbjct: 148 RRRRMLGLSEKNFFNDNFELALSEPSDANTN 178
>Os01g0844900 Homeodomain-like containing protein
Length = 219
Score = 86.7 bits (213), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/60 (70%), Positives = 47/60 (78%)
Query: 215 AKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKR 274
KK R+VW+ ELH +FV AV LG AVPK I+ LMNV+ LTRENVASHLQKYRLYLKR
Sbjct: 104 GKKARMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLYLKR 163
>Os06g0348800 Homeodomain-like containing protein
Length = 422
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 45/56 (80%)
Query: 220 VVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRL 275
V W+ ELHR+FV AV QLGIDKAVP RILE+M ++ LTR N+ASHLQKYR + K +
Sbjct: 150 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 205
>Os11g0157600 Similar to Timing of CAB expression 1
Length = 623
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 59 ITALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSVNGETKTVMK 115
+ A ++RE FDLV+++V MP + G +LL + ++PVIM+S TV++
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 116 GITHGACDYLLKPVRIEELRNIWQHVVRRKFGNRERN 152
+ GA D+L+KPVR ELRN+WQHV RR N + N
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTN 97
>Os02g0830200 Similar to ZmRR2 protein (Response regulator 2)
Length = 131
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 28 VLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMDGF 87
VLAVDD V V+ LLR +Y VT+ + AL++L +R++ ++I+D MP+M GF
Sbjct: 13 VLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSLDRNV-HMIITDYCMPEMTGF 71
Query: 88 KLLELVGLEMDL---PVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVVRR 144
LL+ V +L PV+++S + + + GA D+L+KPVR ++ + V+ +
Sbjct: 72 DLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKPVRPSDVSRLCNRVIMK 131
>Os07g0119300 Twin-arginine translocation pathway signal domain containing
protein
Length = 355
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 216 KKPRVVWSVELHRKFVAAVNQLGIDK-AVPKRILELMNVEKLTRENVASHLQKYRLY 271
+K R WS +LHRKFVAA+ QLG + A PK+I ELM V+ LT + V SHLQKYRL+
Sbjct: 227 RKTRRCWSPDLHRKFVAALQQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 283
>Os07g0449700
Length = 212
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 28 VLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMDGF 87
V+AVDD V V+ LLRR +Y VT+ + AL++L ++ ++I+D MP+M G+
Sbjct: 95 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEPNV-SMIITDYWMPEMTGY 153
Query: 88 KLLELVGLEMDL---PVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNI 137
LL+ + +L PV+++S + + + GA D+LLKPVR ++ I
Sbjct: 154 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 206
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,122,928
Number of extensions: 812148
Number of successful extensions: 1911
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 1934
Number of HSP's successfully gapped: 22
Length of query: 696
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 588
Effective length of database: 11,396,689
Effective search space: 6701253132
Effective search space used: 6701253132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)