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Os01g0239000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0187) R2 : 0.811
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.8 (0.0633) R2dE : 0.812 R2E : 0.811
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0327 (0.0394) R2dN8 : 2.99e-05 R2N8 : -0.000966
σ : 0.351
deviance : 56.91
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C
peak time of C : --
E
wheather : radiation
threshold : 0.34
memory length : 940
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 8.2
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.82 0.296 12.9 0.373 3.25 2.55 -1.25 -1.57 0.0615 10.5 0.7701 241 7.82 --
42.54 0.304 12.9 0.3 3.28 2.59 0.233 -- 0.0523 10.6 0.7798 235 7.61 --
41.2 0.299 12.9 0.311 3.26 2.57 -- -0.568 0.0544 10.5 0.77 236 7.6 --
42.61 0.304 12.9 0.333 3.2 2.46 -- -- 0.0513 10.4 0.7705 226 7.58 --
66.03 0.378 13 0.327 -- 2.45 -- -0.536 -0.0232 -- 10 925 7.35 --
73.65 0.402 13 0.224 2.08 -- -0.321 -- -0.0457 6.75 -- -- -- --
73.91 0.403 13 0.219 2.08 -- -- -- -0.0447 6.77 -- -- -- --
55.02 0.345 13 0.278 -- 2.6 -- -- 0.0437 -- 0.34 936 7.91 --
44.95 0.312 12.9 -- 3.18 2.45 -- -- 0.0302 10.4 0.77 224 7.53 --
299.97 0.809 13 0.265 -- -- -- -- -0.00407 -- -- -- -- --
75.17 0.406 13 -- 2.08 -- -- -- -0.069 6.76 -- -- -- --
56.91 0.351 13 -- -- 2.8 -- -- 0.0327 -- 0.34 940 8.2 --
301.82 0.811 13 -- -- -- -- -- -0.0335 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.73 radiation 1.0 270 < th dose independent sin 14 NA
2 41.95 radiation 1.0 270 > th dose independent sin 14 NA
3 42.21 radiation 1.0 270 < th dose dependent sin 14 NA
4 42.43 radiation 1.0 270 > th dose independent rect. 14 17
5 42.80 temperature 20.0 90 > th dose dependent rect. 15 18
6 42.89 temperature 10.0 270 > th dose dependent rect. 14 18
9 43.06 temperature 10.0 270 > th dose dependent rect. 13 20
15 43.55 temperature 10.0 270 > th dose dependent rect. 14 4
27 44.22 temperature 10.0 270 > th dose dependent rect. 15 2
33 44.28 radiation 1.0 270 > th dose independent rect. 14 5
43 44.31 temperature 20.0 10 > th dose dependent rect. 16 17
67 45.32 temperature 10.0 270 > th dose dependent rect. 13 6
75 45.62 radiation 1.0 270 < th dose dependent rect. 17 11
85 45.90 temperature 15.0 10 > th dose dependent rect. 16 4
89 45.97 radiation 1.0 270 < th dose independent rect. 17 11
91 46.00 radiation 1.0 270 > th dose independent rect. 15 2
120 46.47 humidity 50.0 270 > th dose independent rect. 16 23
163 47.28 humidity 90.0 270 < th dose independent rect. 14 4
166 47.33 radiation 30.0 90 < th dose independent rect. 15 4
168 47.37 precipitation 0.1 270 < th dose independent rect. 14 4
169 47.37 precipitation 0.1 270 < th dose dependent rect. 14 4
172 47.44 radiation 40.0 270 < th dose independent rect. 15 2
174 47.45 precipitation 0.1 270 < th dose independent rect. 15 2
175 47.45 precipitation 0.1 270 < th dose dependent rect. 15 2
184 47.64 humidity 90.0 270 < th dose independent rect. 15 2
185 47.67 wind 1.0 270 > th dose independent rect. 14 4
188 47.68 wind 1.0 270 > th dose independent rect. 15 2
194 47.75 temperature 10.0 270 > th dose independent rect. 15 2
196 47.75 atmosphere 1010.0 270 < th dose independent rect. 15 2
198 47.75 temperature 10.0 270 > th dose independent rect. 17 22
209 47.86 temperature 10.0 270 > th dose independent rect. 14 4
213 47.86 atmosphere 1010.0 270 < th dose independent rect. 14 4
217 47.86 temperature 10.0 270 > th dose independent rect. 18 20
219 47.86 atmosphere 995.0 270 > th dose independent rect. 18 20
226 48.02 wind 9.0 270 < th dose independent rect. 14 4
228 48.07 wind 9.0 270 < th dose independent rect. 18 20
230 48.08 wind 9.0 270 < th dose independent rect. 15 2
233 48.13 radiation 40.0 90 < th dose dependent rect. 15 4
236 48.27 temperature 25.0 270 > th dose independent rect. 14 4
241 48.35 atmosphere 995.0 270 > th dose independent rect. 17 22
242 48.36 temperature 30.0 270 < th dose independent rect. 18 10
254 48.47 wind 9.0 270 < th dose independent rect. 17 22
264 48.66 precipitation 0.1 90 < th dose independent rect. 19 20
266 48.66 precipitation 0.1 90 < th dose dependent rect. 19 20
267 48.67 temperature 10.0 270 > th dose dependent rect. 13 12
274 48.72 humidity 60.0 270 > th dose independent rect. 18 10
295 48.91 temperature 25.0 270 > th dose independent rect. 15 2
304 48.99 atmosphere 1015.0 90 < th dose dependent rect. 15 4
310 49.03 atmosphere 995.0 90 > th dose independent rect. 15 4
345 49.30 humidity 50.0 270 > th dose independent rect. 9 14
346 49.30 precipitation 0.1 270 < th dose independent rect. 4 14
347 49.30 precipitation 0.1 270 < th dose dependent rect. 4 14
358 49.37 humidity 90.0 10 < th dose independent rect. 16 4
367 49.40 atmosphere 1015.0 270 < th dose dependent rect. 15 2
375 49.50 atmosphere 995.0 270 > th dose independent rect. 15 2
384 49.59 radiation 1.0 270 > th dose dependent rect. 15 16
393 49.65 temperature 25.0 10 > th dose independent rect. 16 4
424 49.88 precipitation 0.1 270 < th dose independent rect. 17 22
428 49.88 precipitation 0.1 270 < th dose dependent rect. 17 22
436 49.92 humidity 90.0 270 < th dose dependent rect. 14 4
483 50.13 wind 1.0 270 > th dose independent rect. 18 20
487 50.15 radiation 40.0 10 < th dose dependent rect. 15 5
491 50.16 temperature 10.0 270 > th dose independent rect. 18 10
493 50.16 radiation 20.0 270 < th dose independent rect. 18 10
496 50.16 temperature 10.0 270 > th dose independent rect. 4 14
497 50.16 atmosphere 1015.0 270 < th dose independent rect. 4 14
500 50.16 radiation 1.0 270 < th dose dependent rect. 5 22
516 50.25 atmosphere 995.0 270 > th dose independent rect. 18 10
518 50.26 humidity 90.0 270 < th dose dependent rect. 15 2
525 50.30 wind 9.0 270 < th dose independent rect. 18 10
545 50.40 wind 3.0 10 > th dose independent rect. 16 4
557 50.46 wind 1.0 270 > th dose independent rect. 18 10
558 50.46 radiation 1.0 270 < th dose independent rect. 7 20
571 50.48 radiation 1.0 270 < th dose dependent rect. 7 20
615 50.68 radiation 1.0 270 < th dose dependent rect. 17 16
634 50.80 wind 9.0 90 < th dose dependent rect. 15 4
635 50.81 precipitation 0.1 10 < th dose independent rect. 16 4
637 50.81 precipitation 0.1 10 < th dose dependent rect. 16 4
649 50.86 precipitation 0.1 270 < th dose independent rect. 14 17
650 50.86 precipitation 0.1 270 < th dose dependent rect. 14 17
688 50.96 wind 9.0 270 < th dose independent rect. 4 14
713 51.03 precipitation 0.1 270 < th dose independent rect. 13 20
714 51.03 precipitation 0.1 270 < th dose dependent rect. 13 20
740 51.12 temperature 10.0 10 > th dose independent rect. 16 4
742 51.12 atmosphere 1010.0 10 < th dose independent rect. 16 4
746 51.12 temperature 10.0 10 > th dose independent rect. 20 20
755 51.14 atmosphere 995.0 10 > th dose independent rect. 20 19
785 51.23 wind 9.0 10 < th dose independent rect. 20 20
796 51.28 wind 1.0 90 > th dose dependent rect. 16 3
797 51.28 atmosphere 1015.0 10 < th dose dependent rect. 16 4
807 51.34 radiation 1.0 270 > th dose dependent rect. 15 3
823 51.37 wind 9.0 10 < th dose independent rect. 16 4
844 51.47 humidity 90.0 10 < th dose dependent rect. 16 4
888 51.65 temperature 30.0 270 < th dose independent rect. 18 19
906 51.78 precipitation 0.1 10 < th dose independent rect. 20 19
907 51.78 precipitation 0.1 10 < th dose dependent rect. 20 19
908 51.79 wind 1.0 270 > th dose dependent rect. 14 4
915 51.81 temperature 10.0 1440 > th dose independent rect. 16 5
918 51.81 temperature 10.0 1440 > th dose independent rect. 21 19
947 51.90 temperature 30.0 270 < th dose independent rect. 17 22
990 52.09 precipitation 0.1 270 < th dose independent rect. 18 10
992 52.09 precipitation 0.1 270 < th dose dependent rect. 18 10
993 52.10 temperature 10.0 1440 > th dose independent rect. 17 3
996 52.10 radiation 30.0 1440 < th dose independent rect. 17 3