BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0101300 Os06g0101300|AK109515
(338 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0101300 Zinc finger, RING-type domain containing protein 451 e-127
Os10g0487400 Zinc finger, RING-type domain containing protein 184 6e-47
Os05g0488800 Zinc finger, RING-type domain containing protein 124 7e-29
Os03g0812200 Zinc finger, RING-type domain containing protein 124 7e-29
Os03g0351800 Zinc finger, RING-type domain containing protein 109 3e-24
Os01g0276600 Zinc finger, RING-type domain containing protein 106 3e-23
Os03g0324900 Zinc finger, RING-type domain containing protein 102 6e-22
Os02g0767600 101 9e-22
Os05g0110000 Zinc finger, RING-type domain containing protein 97 2e-20
Os12g0118700 Zinc finger, RING-type domain containing protein 95 7e-20
Os11g0119200 Zinc finger, RING-type domain containing protein 94 2e-19
Os08g0487500 Zinc finger, RING-type domain containing protein 89 3e-18
Os01g0802000 Zinc finger, RING-type domain containing protein 88 1e-17
Os05g0495000 87 2e-17
Os01g0972000 Zinc finger, RING-type domain containing protein 86 4e-17
Os03g0271600 Zinc finger, RING-type domain containing protein 86 5e-17
Os07g0631200 Zinc finger, RING-type domain containing protein 76 3e-14
Os02g0727700 Zinc finger, RING-type domain containing protein 76 4e-14
Os09g0434200 Zinc finger, RING-type domain containing protein 76 4e-14
Os08g0464400 Zinc finger, RING-type domain containing protein 75 7e-14
Os06g0633500 Zinc finger, RING-type domain containing protein 75 9e-14
Os12g0140233 Zinc finger, RING-type domain containing protein 70 2e-12
Os12g0140700 Zinc finger, RING-type domain containing protein 70 2e-12
Os02g0191500 Similar to Goliath homolog precursor (RING fin... 68 1e-11
Os11g0142600 66 5e-11
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/338 (70%), Positives = 237/338 (70%)
Query: 1 MSSSPAHAQRFYCHQCDRTVPIPPPTSPDADVLCPFCGGGFVEELGEDIXXXXXXXXXXX 60
MSSSPAHAQRFYCHQCDRTVPIPPPTSPDADVLCPFCGGGFVEELGEDI
Sbjct: 1 MSSSPAHAQRFYCHQCDRTVPIPPPTSPDADVLCPFCGGGFVEELGEDINPNPNPNPSPF 60
Query: 61 XXXXXXXXXXXXXXDLRNPSDLAAFFGXXXXXXXXXXAARHFDPSNFLHDHFTGLLSGGA 120
DLRNPSDLAAFFG AARHFDPSNFLHDHFTGLLSGGA
Sbjct: 61 LPHHPFFPFASPSFDLRNPSDLAAFFGPPSPSPSPSPAARHFDPSNFLHDHFTGLLSGGA 120
Query: 121 TIQIVXXXXXXXXXXXXXXXXXXXXXXXDYFVGSGLEQLIQQLAENDPNRYGTPPAAKSA 180
TIQIV DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSA
Sbjct: 121 TIQIVLEGSSASLPLGGAAAGPGGISLGDYFVGSGLEQLIQQLAENDPNRYGTPPAAKSA 180
Query: 181 VAALPDXXXXXXXXXXXXXXQCAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCP 240
VAALPD QCAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCP
Sbjct: 181 VAALPDVAVSADMMAADGGAQCAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCP 240
Query: 241 VCRFELPTDDPHHAHPTLGSHRXXXXXXXXXXXXXXXXXRLAERRFRISLPWPLRAAFGG 300
VCRFELPTDDPHHAHPTLGSHR RLAERRFRISLPWPLRAAFGG
Sbjct: 241 VCRFELPTDDPHHAHPTLGSHRPAAPASASASPSPAPPPRLAERRFRISLPWPLRAAFGG 300
Query: 301 QAESSNPTNQDPVGGSTDXXXXXXXXXXXXHRGYDDLD 338
QAESSNPTNQDPVGGSTD HRGYDDLD
Sbjct: 301 QAESSNPTNQDPVGGSTDASGSGNNNATGGHRGYDDLD 338
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 113/210 (53%), Gaps = 13/210 (6%)
Query: 102 FDPSNFLHDHFTGLLSGGATIQIVXXXXXXXXXXXXXXXXXXXXXXXDYFVGSGLEQLIQ 161
FD F ++ L+ GGA IQ++ DYFVG GLEQLI+
Sbjct: 72 FDAVTFFQNYLQNLMDGGANIQVLLDDASVGLAPGIGRVGGASFG--DYFVGPGLEQLIE 129
Query: 162 QLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDFHLGAAAKQLPCK 221
QL ENDPNRYGTPPAAKSA++ LPD +CAVC +DF G AKQ+PCK
Sbjct: 130 QLTENDPNRYGTPPAAKSALSTLPDVVVTDAMVAAADGAECAVCKEDFSPGEGAKQMPCK 189
Query: 222 HVFHKDCILPWLDLHSSCPVCRFELPTDDPHHA-------HPTLG---SHRXXXXXXXXX 271
H++H DCI+PWLDLH+SCP+CRFELPTDDP + PT G
Sbjct: 190 HIYHADCIMPWLDLHNSCPICRFELPTDDPDYEGRKKSNPQPTAGVDAGAASGSSTAAEE 249
Query: 272 XXXXXXXXRLAERRFRISLPWPLRAAFGGQ 301
RL ERRF +SLPWP + G Q
Sbjct: 250 REESGESARLVERRFNVSLPWPF-SGLGSQ 278
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 7/102 (6%)
Query: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDD 208
+Y +G+GL L+Q LAE+DP+R GTPPA K AV ALP C+VC+DD
Sbjct: 153 EYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALP-------TVKIEEVVSCSVCLDD 205
Query: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDD 250
+G+ AKQ+PC+H FH CILPWL+LHSSCPVCRFELP+++
Sbjct: 206 LEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEE 247
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 7/105 (6%)
Query: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDD 208
DYF+G GL+ L+Q LAE+D NR GTPPA K AV ALP C+VC++D
Sbjct: 209 DYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALP-------TVNIQEVLGCSVCLED 261
Query: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHH 253
F +G AK++PC+H FH CILPWL+LHSSCP+CRF+LPT++ +
Sbjct: 262 FEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESKN 306
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
Query: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDD 208
DYFVG GL+ LI+QL +ND R G PPA +S++ A+P C VC D
Sbjct: 138 DYFVGPGLDDLIEQLTQND--RRGPPPATQSSIDAMP--TVKITQRHLSGDSHCPVCKDK 193
Query: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELP 247
F LG+ A+++PCKH++H DCI+PWL+ H+SCPVCR+ELP
Sbjct: 194 FELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDD 208
DYF+G GL+ L+Q++ + D R GT PA K AV ++P CAVC++D
Sbjct: 163 DYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDCDSA---CAVCLED 219
Query: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPT 248
+ G A ++PC+H FH CI+PWL +HSSCPVCRF+LPT
Sbjct: 220 YAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPT 259
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 59/93 (63%), Gaps = 9/93 (9%)
Query: 168 PNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDFHLGAAAKQLPCKHVFHKD 227
PNR GTPPA K AVAALP C VC+D+F G A+++PCKH FH
Sbjct: 183 PNRQGTPPARKEAVAALP-----TVRVHDAAGATCPVCLDEFEAGGEAREMPCKHRFHDG 237
Query: 228 CILPWLDLHSSCPVCRFELPTDDPHHAHPTLGS 260
CILPWL+ HSSCPVCR++LPTDD PT G+
Sbjct: 238 CILPWLEAHSSCPVCRYQLPTDD----EPTAGN 266
>Os02g0767600
Length = 335
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDD 208
+YF G L LI++L +ND R G PA SA+ +LP QC VC +D
Sbjct: 150 NYFNGPNLNNLIEELTQND--RPGPAPAPSSAIDSLP--TVQITGAHLSDGSQCPVCKED 205
Query: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFEL 246
F LG AA+Q+PCKHV+H DCI+PWL LH+SCPVCR++L
Sbjct: 206 FELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQL 243
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 149 DYFVGSGLEQLIQQLAENDPNRYG----TPPAAKSAVAALPDXXXXXXXXXXXXXXQCAV 204
D+ +GSG E+L+ QL + + PPA+K++V ++P CAV
Sbjct: 88 DFLMGSGFERLLDQLTQIEAGGLARARENPPASKASVESMP--TVTIAASHVGADSHCAV 145
Query: 205 CMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTD 249
C + F LG A+++PC H++H+DCILPWL L +SCPVCR E+PTD
Sbjct: 146 CKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTD 190
>Os12g0118700 Zinc finger, RING-type domain containing protein
Length = 499
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDD 208
DY E L++Q AE++ +R G PPAA S + LP C VC D
Sbjct: 282 DYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVI-CPVCKDP 340
Query: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHH 253
A AKQLPC H++H CILPWL ++CPVCR+ELPTDD +
Sbjct: 341 IPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAEY 385
>Os11g0119200 Zinc finger, RING-type domain containing protein
Length = 491
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDD 208
DY E L++Q AE++ +R G PPAA S + LP C VC D
Sbjct: 274 DYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVI-CPVCKDP 332
Query: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHH 253
A AKQLPC H++H CILPW ++CPVCR+ELPTDD +
Sbjct: 333 IPTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEY 377
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 173 TPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDFHLGAAAKQLPCKHVFHKDCILPW 232
PPAA+SAV ALP +CAVC D G K+LPC H +H++CI+PW
Sbjct: 182 KPPAARSAVEALP--SAVVAAGEDGEGEECAVCRDGVAAGERVKRLPCSHGYHEECIMPW 239
Query: 233 LDLHSSCPVCRFELPTDDPHH 253
LD+ +SCP+CRFELPTDDP +
Sbjct: 240 LDVRNSCPLCRFELPTDDPQY 260
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 150 YFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDF 209
+ VG LE L +QL ++ NR G PPA +SA+ ++P C VC D F
Sbjct: 143 FLVGPSLEALFEQLLLHN-NRQGPPPAPQSAIDSMP--VVKINLRHLRDDPHCPVCTDKF 199
Query: 210 HLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELP 247
+G A+++PCKH++H +CI+PWL H+SCPVCR LP
Sbjct: 200 EVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
>Os05g0495000
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 151 FVGSGLEQLIQQLAEN-DPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDF 209
+ +GLE L +QL +R G PPA SA+ A+P +C VC D+F
Sbjct: 189 YYRAGLEALFEQLQNQLGSSRQGPPPAPPSAIDAMP--VVTISRRHLRAEPRCPVCQDEF 246
Query: 210 HLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELP 247
LGA A+++PC H++H DCI+PWL H+SCPVCR LP
Sbjct: 247 QLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCRHSLP 284
>Os01g0972000 Zinc finger, RING-type domain containing protein
Length = 334
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 12/105 (11%)
Query: 152 VGSGLEQLIQQL------AENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVC 205
S L L +L A ++PN PPA+K+AV ++P CAVC
Sbjct: 81 ASSALRPLFDRLLLRIPSASDNPN----PPASKAAVDSMP--TILIGACHLAADSHCAVC 134
Query: 206 MDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDD 250
+ FHL A A+++PC H++H +CILPWL LH+SCPVCR +PTDD
Sbjct: 135 KEPFHLAAEAREMPCAHIYHHNCILPWLALHNSCPVCRHRMPTDD 179
>Os03g0271600 Zinc finger, RING-type domain containing protein
Length = 279
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 151 FVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDFH 210
+GSG +L+ Q + + PPA+K+AV ++P CAVC + F
Sbjct: 91 LMGSGFHRLLDQFSRLEAAAP-RPPASKAAVESMPSVTVAGSGA------HCAVCQEAFE 143
Query: 211 LGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFEL 246
GA+A+++PCKHV+H+DCILPWL L +SCPVCR EL
Sbjct: 144 PGASAREMPCKHVYHQDCILPWLSLRNSCPVCRREL 179
>Os07g0631200 Zinc finger, RING-type domain containing protein
Length = 185
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 172 GTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDFHLGAAAKQLPCKHVFHKDCILP 231
G PPA+K+A+A+L + CA+C+D F AA K++PC H FH +C+
Sbjct: 59 GVPPASKAAIASLKEVKAGEDGEGGDSLGDCAICLDAF---AAGKEMPCGHRFHSECLER 115
Query: 232 WLDLHSSCPVCRFELPTDD 250
WL +H SCPVCR ELP +
Sbjct: 116 WLGVHGSCPVCRRELPAAE 134
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 201 QCAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHHAH 255
QCAVC D G A++LPC H++H CILPWL + ++CP+CR ELPTDDP + +
Sbjct: 230 QCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEYEN 284
>Os09g0434200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 152 VGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDXXXXXXXXXXX-XXXQCAVCMDDFH 210
V LE +++ +N PPA+K VA LP QCAVC +
Sbjct: 189 VDGDLEAALEESLQNVMANPKVPPASKEVVANLPVVTVTEEIIARLGKETQCAVCRESLL 248
Query: 211 LGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDD 250
+ ++LPCKH+FH C+ PWLD ++SCP+CR EL TDD
Sbjct: 249 VDDKMQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDD 288
>Os08g0464400 Zinc finger, RING-type domain containing protein
Length = 211
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 202 CAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHHA 254
CA+C DD L A A++LPC H++H +CI+ WL++ +SCPVCR LP+D+P A
Sbjct: 74 CAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRSRLPSDEPQDA 126
>Os06g0633500 Zinc finger, RING-type domain containing protein
Length = 124
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%)
Query: 202 CAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHH 253
CAVC D G A QLPC H++H CI PWL + +SCPVCR+ELPTDDP +
Sbjct: 50 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCRYELPTDDPEY 101
>Os12g0140233 Zinc finger, RING-type domain containing protein
Length = 199
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 171 YGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDFHLGAAAKQLPCKHVFHKDCIL 230
+G PA+ A+A L + CAVC++DF G ++PC H FH CIL
Sbjct: 122 FGAVPASSKAMAELQEAMASDARERG-----CAVCLEDFEAGEKLTRMPCSHCFHATCIL 176
Query: 231 PWLDLHSSCPVCRFELPTDDPHH 253
WL L CP+CRF +PT D +
Sbjct: 177 DWLRLSHRCPLCRFPMPTQDQSY 199
>Os12g0140700 Zinc finger, RING-type domain containing protein
Length = 197
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 171 YGTPPAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDFHLGAAAKQLPCKHVFHKDCIL 230
+G PA+ A+A L + CAVC++DF G ++PC H FH CIL
Sbjct: 120 FGAIPASSKAMAELQEAMASDARERG-----CAVCLEDFEAGEKLTRMPCSHCFHATCIL 174
Query: 231 PWLDLHSSCPVCRFELPTDDPHH 253
WL L CP+CRF +PT D +
Sbjct: 175 DWLRLSHRCPLCRFPMPTQDQSY 197
>Os02g0191500 Similar to Goliath homolog precursor (RING finger protein 130)
Length = 375
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%)
Query: 202 CAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHHAH 255
CAVC D F G LPCKH FH DCI PWL + ++CPVCR ++ T+D +
Sbjct: 275 CAVCKDSFASGQIVALLPCKHYFHGDCIWPWLTIRTTCPVCRHQVRTEDDDYEQ 328
>Os11g0142600
Length = 269
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%)
Query: 175 PAAKSAVAALPDXXXXXXXXXXXXXXQCAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLD 234
PA+ A+AALP CAVC++ F G K++PC H FH +CI WL
Sbjct: 184 PASSDAIAALPVPETTVSETETREEEACAVCLEGFKEGDRVKKMPCSHDFHANCISEWLR 243
Query: 235 LHSSCPVCRFELPTD 249
+ CP CRF LP +
Sbjct: 244 VSRLCPHCRFALPAE 258
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,283,805
Number of extensions: 351953
Number of successful extensions: 1349
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 1411
Number of HSP's successfully gapped: 25
Length of query: 338
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 237
Effective length of database: 11,762,187
Effective search space: 2787638319
Effective search space used: 2787638319
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)