BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0686000 Os04g0686000|AK108418
(413 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0686000 U box domain containing protein 620 e-178
Os04g0417400 U box domain containing protein 203 2e-52
Os01g0865700 U box domain containing protein 186 4e-47
Os02g0539200 U box domain containing protein 167 1e-41
Os03g0240600 U box domain containing protein 128 9e-30
Os02g0738200 U box domain containing protein 127 2e-29
Os02g0548700 U box domain containing protein 112 4e-25
Os06g0248500 U box domain containing protein 103 2e-22
Os12g0161100 U box domain containing protein 102 4e-22
Os10g0123100 100 2e-21
Os02g0690600 U box domain containing protein 90 2e-18
Os07g0177900 87 3e-17
Os04g0589700 U box domain containing protein 86 5e-17
Os02g0540700 Similar to Arm repeat-containing protein 80 3e-15
Os04g0437300 U box domain containing protein 77 2e-14
Os03g0275900 Similar to Spotted leaf protein 11 (Spotted le... 76 4e-14
Os02g0488701 U box domain containing protein 76 5e-14
Os04g0418500 U box domain containing protein 74 2e-13
Os01g0823900 Arm repeat protein 71 1e-12
Os03g0232600 U box domain containing protein 70 2e-12
Os12g0570000 Similar to Spotted leaf protein 11 (Spotted le... 70 3e-12
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 69 5e-12
Os01g0229700 U box domain containing protein 69 9e-12
Os05g0439400 Similar to Arm repeat containing protein 66 4e-11
>Os04g0686000 U box domain containing protein
Length = 413
Score = 620 bits (1600), Expect = e-178, Method: Compositional matrix adjust.
Identities = 322/400 (80%), Positives = 322/400 (80%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAGTCPLTKQPVPPDCDPTPNHTLR 73
PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAGTCPLTKQPVPPDCDPTPNHTLR
Sbjct: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAGTCPLTKQPVPPDCDPTPNHTLR 73
Query: 74 RLIQSWCALHADHGVDLVPTPKPPADRARVADXXXXXXXXXXXXXXXXXXXXXXXXXXES 133
RLIQSWCALHADHGVDLVPTPKPPADRARVAD ES
Sbjct: 74 RLIQSWCALHADHGVDLVPTPKPPADRARVADLVSRLRAATSSAALLDALRELRDVAAES 133
Query: 134 ERNRKXXXXXXXXXXXXXXXXXXSCRDAKAACDEALEIVCSLELSERCLARLVERNEELV 193
ERNRK SCRDAKAACDEALEIVCSLELSERCLARLVERNEELV
Sbjct: 134 ERNRKLLAAVPGAVDVLAAVVVASCRDAKAACDEALEIVCSLELSERCLARLVERNEELV 193
Query: 194 DALVATLQRTNTTSRAHAALLLEAVTAVMPSNRLVSLPEEVFGEAVQLLRDRVSSPATRA 253
DALVATLQRTNTTSRAHAALLLEAVTAVMPSNRLVSLPEEVFGEAVQLLRDRVSSPATRA
Sbjct: 194 DALVATLQRTNTTSRAHAALLLEAVTAVMPSNRLVSLPEEVFGEAVQLLRDRVSSPATRA 253
Query: 254 ALHVLVGTTSWGRNRVKXXXXXXXXXXXXXXXXXPVERRGCELALAALDRMCGCAEGRAA 313
ALHVLVGTTSWGRNRVK PVERRGCELALAALDRMCGCAEGRAA
Sbjct: 254 ALHVLVGTTSWGRNRVKAVDAGAVAVLVDMLLDGPVERRGCELALAALDRMCGCAEGRAA 313
Query: 314 LVSHGAGVAVVGRKVLRVSEVASEKAVRVLRSVARHAATAAVVQEMGQTGAVEKLCVVAQ 373
LVSHGAGVAVVGRKVLRVSEVASEKAVRVLRSVARHAATAAVVQEMGQTGAVEKLCVVAQ
Sbjct: 314 LVSHGAGVAVVGRKVLRVSEVASEKAVRVLRSVARHAATAAVVQEMGQTGAVEKLCVVAQ 373
Query: 374 SEQCGXXXXXXXXXXXXXXXXXWRNSPCLQPHLQALYPSC 413
SEQCG WRNSPCLQPHLQALYPSC
Sbjct: 374 SEQCGERTRERARETLRLHARAWRNSPCLQPHLQALYPSC 413
>Os04g0417400 U box domain containing protein
Length = 451
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 15 SYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLT--AGTCPLTKQPV-PPDCDPTPNHT 71
SYFVCPISL+IMRDPVTL TGITYDR+ IERW+ T G CP+TKQ + P D +PTPNHT
Sbjct: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
Query: 72 LRRLIQSWCALHADHGVDLVPTPKPPADRARVADXXXXXXXXXXXXXXXXXXXXX----X 127
LRRLIQ WCA+HA V+ PTP+PP D ARVA
Sbjct: 77 LRRLIQGWCAVHA---VERFPTPRPPVDAARVAAIVDAARPLLRRRRQREELMASLRELA 133
Query: 128 XXXXESERNRK-----XXXXXXXXXXXXXXXXXXSCRDAKAACDE--------------- 167
ES+RNR+ DA +A E
Sbjct: 134 DIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPEETTCGGVHDPAKASS 193
Query: 168 ----ALEIVCSLELSERCLARLVERN--EELVDALVATLQRTNTTSRAHAALLLEAVTAV 221
AL I+ SL+LSE R++E + E+ ++ + L+R + SR LL++
Sbjct: 194 PEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLSRMQGIHLLKSALPA 253
Query: 222 MPSNRLVSLPEEVFGEAVQLLRDRVSSPATRAALHVLVGTTSWGRNRVKXXXXXXXXXXX 281
M RL S + V ++ DR S+ A + ALHVL W RNRVK
Sbjct: 254 MAPARLTSARAALVDGVVGVVADRPSAKAVKVALHVLCRLCPWARNRVKAVDAGAVSALV 313
Query: 282 -----XXXXXXPVERRGCELALAALDRMCGCAEGRAALVSHGAGVAVVGRKVLRVSE--- 333
+RR CELA A+D +C R G R+V ++
Sbjct: 314 RLLLDEGCGGGGGDRRACELAAVAIDHICRL---RGGAPGSGGAPGGAQRQVACSADRCP 370
Query: 334 --VASEKAVRVLRSVARHAATAAVVQEMGQTGAVEKLCVVAQSEQCGXXXXXXXXXXXXX 391
+E AVR L +VARH+AT+AV+QEM G V +L + Q G
Sbjct: 371 HTAGAESAVRALHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGERTRARAREMLKM 430
Query: 392 XXXXWRNSPCLQPHLQALYP 411
WR+SPCL HL A YP
Sbjct: 431 HARVWRDSPCLASHLNASYP 450
>Os01g0865700 U box domain containing protein
Length = 404
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 152/247 (61%), Gaps = 1/247 (0%)
Query: 166 DEALEIVCSLELSERCLARLVERNEELVDALVATLQRTNTTSRAHAALLLEAVTAVMPSN 225
+EA+ ++ SL + E+ L + R+ L ++L A L+ +N SRAHA L+ + +
Sbjct: 159 EEAVGVLASLRIPEQELIGVSTRHGNLAESLTAVLRSSNLQSRAHAVQLVRTLADAVVPA 218
Query: 226 RLVSLPEEVFGEAVQLLRDRVSSPATRAALHVLVGTTSWGRNRVKXXXXXXXXXXXXXXX 285
++ L E+ E V ++RDRVS+ AT+A+LH L +GR+RVK
Sbjct: 219 WVIGLNAELLAEVVGVVRDRVSARATKASLHALAALCPYGRHRVKIVGAGAVAALVELLL 278
Query: 286 XXPVERRGCELALAALDRMCGCAEGRAALVSHGAGVAVVGRKVLRVSEVASEKAVRVLRS 345
P ERR CELALA LDR+C CAEGRA LV+H AGVAVVG+KVLRVSE ASE+AVRVLRS
Sbjct: 279 DEP-ERRVCELALAVLDRLCTCAEGRAELVAHAAGVAVVGKKVLRVSEAASERAVRVLRS 337
Query: 346 VARHAATAAVVQEMGQTGAVEKLCVVAQSEQCGXXXXXXXXXXXXXXXXXWRNSPCLQPH 405
VARHAAT AV+QEM Q G V KLC+ +SEQCG WR SPCL P
Sbjct: 338 VARHAATPAVLQEMAQCGVVGKLCLALRSEQCGVKTKEKAHEVLKLHSRVWRASPCLSPS 397
Query: 406 LQALYPS 412
ALYPS
Sbjct: 398 FLALYPS 404
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG---TCPLTKQPVPPDCDPTPNH 70
PSYFVCPISLQ+MRDPVTLPTGI+YDR I RWL G TCP+T+QP+ + TPNH
Sbjct: 9 PSYFVCPISLQLMRDPVTLPTGISYDRAAIARWLAAPGARRTCPVTRQPLEHGLELTPNH 68
Query: 71 TLRRLIQSWCA 81
TLRRLIQSW A
Sbjct: 69 TLRRLIQSWAA 79
>Os02g0539200 U box domain containing protein
Length = 442
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 151/252 (59%), Gaps = 6/252 (2%)
Query: 166 DEALEIVCSLELSERCLARLVERNEE--LVDALVATLQRTNTTSRAHAALLLEAVTAVMP 223
+EAL ++ SL+ SE L R++ ++ +D L + L+R + SRA+A LLL+AVT+ MP
Sbjct: 192 EEALGVLYSLKPSEPTLRRVLGKDNGVGFLDTLASVLRRPSYRSRAYAILLLKAVTSAMP 251
Query: 224 SNRLVSLPEEVFGEAVQLLRDRVSSPATRAALHVLVGTTSWGRNRVKXXXXXXXXXXXXX 283
RL+++ E+ E V+++ D VSS A +AALHVL WGRNRVK
Sbjct: 252 PERLMAVSPELVEEVVRVVSDGVSSKAVKAALHVLCRLCPWGRNRVKAVEAGAVAALVEL 311
Query: 284 XXXXPV---ERRGCELALAALDRMCGCAEGRAALVSHGAGVAVVGRKVLRVSEVASEKAV 340
RR ELA+ A+D +CGCAEGR+ LV+H AG+AVV ++ +RVS A+E AV
Sbjct: 312 LLDEEGGGGRRRAAELAVVAIDHLCGCAEGRSELVAHPAGLAVVSKRAMRVSPAATESAV 371
Query: 341 RVLRSVARHAATAAVVQEMGQTGAVEKLCVVAQSEQCGXXXXXXXXXXXXXXXXXWRNSP 400
R L +VAR+AAT AV+QEM G V KL +V Q++ G W++SP
Sbjct: 372 RALHAVARNAATPAVLQEMLAVGVVAKLLLVLQADG-GERARARAREMLRANARVWKDSP 430
Query: 401 CLQPHLQALYPS 412
CLQ HL+A YPS
Sbjct: 431 CLQAHLKASYPS 442
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 11/99 (11%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLL-------TAGTCPLT-KQPVPPDCD 65
PSYF+CPISL+IMRDPVTL TGITYDR IERW+ GTCP+T +Q P + +
Sbjct: 9 PSYFLCPISLEIMRDPVTLATGITYDRSSIERWMFGGGGGDGGKGTCPVTRRQLAPAERE 68
Query: 66 PTPNHTLRRLIQSWCALHADHGVDLVPTPKPPADRARVA 104
TPNHTLRRLIQ+WCA HA V+ PTP+PP D RVA
Sbjct: 69 ATPNHTLRRLIQAWCAAHA---VERFPTPRPPVDSCRVA 104
>Os03g0240600 U box domain containing protein
Length = 445
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 165/377 (43%), Gaps = 23/377 (6%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTA-GTCPLTKQPVPPDCDPTPNHTL 72
P++F CPISL +MRDPVT PTGITYDR+GIE WL T CP+T P+ + D PNH +
Sbjct: 35 PAHFRCPISLDLMRDPVTAPTGITYDREGIEAWLDTGRAVCPVTHAPLRHE-DLVPNHAI 93
Query: 73 RRLIQSWCALHADHGVDLVPTPKPPADRARVA----DXXXXXXXXXXXXXXXXXXXXXXX 128
RR+IQ WC + GV+ +PTPK P + + D
Sbjct: 94 RRVIQDWCVANRSRGVERIPTPKIPVTPVQASELLFDVAESAARRGAAGRAAGAVARVRA 153
Query: 129 XXXESERNRKXXXXXXXXXXXXXXXXXXSCRDAKAACDEAL-EIVCSLELSERCLARLVE 187
+SERNR+ + ++ L +VC + L E AR++
Sbjct: 154 LARDSERNRRCFVSVGTGRVLAAAFESLAAAGEAGVLEDVLAALVCMMPLDEEA-ARVLA 212
Query: 188 RNEELVDALVATLQRTNTTSRAHAALLLEAVTAVMPSNRLVSLPEEVFGEAVQLLRDRVS 247
+ + +LVA + + R +A L ++ AV V L ++ + V L +
Sbjct: 213 SSSSM-GSLVAIAKHGSLAGRLNAVLAIK--EAVSRDGAFVDLADDKVDKVVDALVVIIK 269
Query: 248 SP----ATRAALHVLVGTTSWGRNRVKXXXXXXXXXXXXXXXXXPVERRGCELALAALDR 303
+P AT+AA+ V + RV ++ E ALA LD
Sbjct: 270 APICPQATKAAM-VATYHLASSDERVAARVASTGLVPTLIEALVDADKSVSEKALAVLDA 328
Query: 304 MCGCAEGRAALVSHGAGVAVVGRKVLRVSEVASEKAVRVL-------RSVARHAATAAVV 356
M EGRA+ H + + +K+ RVS+VA+E AV + S AA +
Sbjct: 329 MLASEEGRASARGHALAMPALVKKMFRVSDVATELAVSAMWRLGCKASSGDEEAAATGCL 388
Query: 357 QEMGQTGAVEKLCVVAQ 373
E + GA +KL ++ Q
Sbjct: 389 VEALRVGAFQKLLLLLQ 405
>Os02g0738200 U box domain containing protein
Length = 456
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 160/371 (43%), Gaps = 22/371 (5%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTA-GTCPLTKQPVPPDCDPTPNHTL 72
P +F+CPISL +MRDPVT PTGITYDRDG+E WL TCP+T +P+ P+ + PNH
Sbjct: 44 PDHFLCPISLDMMRDPVTAPTGITYDRDGVEVWLERGRPTCPVTGRPLRPE-ELVPNHAT 102
Query: 73 RRLIQSWCALHADHGVDLVPTPKPP---ADRARVADXXXXXXXXXXXXXXXXXXXXXXXX 129
RR+IQ WC + GV+ VPTP+ P AD + +
Sbjct: 103 RRMIQEWCVANRALGVERVPTPRVPVSAADAREILEGVAAAARRGDAAACGRMVARARAL 162
Query: 130 XXESERNRKXXXXXXXXXXXXXXXXXXSCRDAKAACDEALEI-VCSLELSERCLARLVER 188
ESERNR+ R A A+ D+ E C+LE L
Sbjct: 163 GKESERNRRCLASAGAERALALAFS----RLAAASTDQQAEARACALEEILAALVVFFPL 218
Query: 189 NEE---------LVDALVATLQRTNTTSRAHAALLLEAVTAVMPSNRL--VSLPEEVFGE 237
+EE +DALV+ L +R A ++L + + + L +S ++
Sbjct: 219 DEESRRCIASPPSLDALVSILSHGEQVTRVSAVVVLREIASSCDNQCLEAMSKANAMYDA 278
Query: 238 AVQLLRDRVSSPATRAALHVLVGTTSWGRNRVKXXXXXXXXXXXXXXXXXPVERRGCELA 297
V L+ VS AT+AAL ++ E A
Sbjct: 279 LVNLVAKPVSPQATKAALVTAYYLVKNDIEHAASRLVDLGTVELLVELLADADKGTTEKA 338
Query: 298 LAALDRMCGCAEGRAALVSHGAGVAVVGRKVLRVSEVASEKAVRVLRSVARHA-ATAAVV 356
LA LD + A+ R +H V V+ +K + VS++A+E AV L + +++ A
Sbjct: 339 LAVLDTVLVAAKARDRAYAHALAVPVLAKKTMHVSDMATEFAVSALWRLCKNSPADGGCK 398
Query: 357 QEMGQTGAVEK 367
E Q GA +K
Sbjct: 399 AEALQVGAFQK 409
>Os02g0548700 U box domain containing protein
Length = 417
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAGT-CPLTKQPVPPDCDPTPNHTL 72
P YF CPISL++MRDPVT+ TG TYDR IE W+ T T CP+T+ P+ PNHTL
Sbjct: 19 PWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRSPLDRAFTLIPNHTL 78
Query: 73 RRLIQSWCALHADHGVDLVPTPKPPAD 99
RRLIQ WC H GV+ +PTPK PAD
Sbjct: 79 RRLIQDWCVAHRSLGVERIPTPKQPAD 105
>Os06g0248500 U box domain containing protein
Length = 449
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTA-GTCPLTKQPVPPDCDPTPNHTL 72
P+ FVCPISL++MRDPVT PTGITYDR+ +E WL TCP+T +PV D PNH
Sbjct: 39 PANFVCPISLEMMRDPVTAPTGITYDRESVEGWLARGHDTCPVTGRPVRL-ADLVPNHAT 97
Query: 73 RRLIQSWCALHADHGVDLVPTPKPP 97
RR+IQ WC + GV+ VPTP+ P
Sbjct: 98 RRMIQDWCVANRARGVERVPTPRVP 122
>Os12g0161100 U box domain containing protein
Length = 437
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 122/264 (46%), Gaps = 20/264 (7%)
Query: 166 DEALEIVCSLELSERCLARLVERNEELVDAL---VATLQRTN---TTSRAHAALLLEAVT 219
D L + +L++S L LV +LVDA+ +ATL+ + T +R A LLEAVT
Sbjct: 174 DACLALFHALDVSADELRPLVADGHDLVDAVTRVMATLEAGDANATRARESAVRLLEAVT 233
Query: 220 AVMPSNRLVSLPEEVFGEAVQLLRDRVS-SPATRAALHVLVG------TTSWGRNRVKXX 272
+ L L E F A ++RDR + SP A + + RNR
Sbjct: 234 EAADAPVLERLSPEFFSAATAVVRDRGAVSPGAARAAVRALANACRARASGACRNRALAV 293
Query: 273 XXXXXXXXXX------XXXXXPVERRGCELALAALDRMCGCAEGRAALVSHGAGVAVVGR 326
P RR E +A L +C CAEGRAA+ SH AG+ VV R
Sbjct: 294 DAGAAREAIELELDAWSSPQAPGGRRATEAVMALLAELCACAEGRAAVASHPAGITVVAR 353
Query: 327 KVLRVSEVASEKAVRVLRSVARHAATAAVVQEMGQTGAVEKLCVVAQSEQCGXXXXXXXX 386
+VLRVS A AVRVL +VA AA+ V++EM + GAV KLC V Q+E C
Sbjct: 354 RVLRVSAAADACAVRVLAAVAGRAASPEVLREMARVGAVGKLCCVLQAE-CDAGVKEAAR 412
Query: 387 XXXXXXXXXWRNSPCLQPHLQALY 410
W SPC+ +L + Y
Sbjct: 413 AVLRMHSGVWSGSPCVSAYLLSRY 436
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTA-GTCPLTKQPVPPDCDPTPNHTL 72
P +F+CPISLQ M+DPVT PTGI+YDR I RWL +CP+T P+ D TPN TL
Sbjct: 6 PQHFMCPISLQPMQDPVTSPTGISYDRRAIHRWLAAGHSSCPVTGHPLSLS-DLTPNLTL 64
Query: 73 RRLIQSWCALHADHGVDLVP------TPKPP 97
RRLI SW H P TP PP
Sbjct: 65 RRLIHSW------HHSTTTPFPVERSTPSPP 89
>Os10g0123100
Length = 460
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 10/93 (10%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLL---------TAGTCPLTKQPVPPDC 64
P F CPISL++MRDPV PTGITYDR GIE WLL + TCP+TK + D
Sbjct: 22 PPEFRCPISLELMRDPVVGPTGITYDRAGIEAWLLAAGAGKTAAASSTCPVTKGDLRAD- 80
Query: 65 DPTPNHTLRRLIQSWCALHADHGVDLVPTPKPP 97
D PNH LRR+IQ+WC + GV+ +PTP+ P
Sbjct: 81 DLVPNHALRRVIQAWCVANRCRGVERIPTPRVP 113
>Os02g0690600 U box domain containing protein
Length = 425
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG--TCPLTKQPVPPDCDPTPNHT 71
P F+CPIS+++M DPVT+ TG+TYDR IE WL G TCP T QP+ + D TPNHT
Sbjct: 8 PQLFLCPISMELMEDPVTVSTGVTYDRRSIEEWLFVYGRTTCPATMQPL-SNFDLTPNHT 66
Query: 72 LRRLIQSWC 80
L+R+I SW
Sbjct: 67 LKRVISSWL 75
>Os07g0177900
Length = 428
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 247 SSPATRAALHVLVGTTSWGRNRVKXXXXXXXXXXXXXXXXXPV--ERRGCELALAALDRM 304
S+ A + ALHVL W RNRVK +RR CELA+ A+D +
Sbjct: 226 SAKAVKVALHVLCRLCPWSRNRVKAVDVGAVSALVHLLLNEGCGGDRRACELAVMAIDHI 285
Query: 305 CGCAEGRAALVSHGAGVAVVGRKVLRVSEVASEKAVRVLRSVARHAATAAVVQEMGQTGA 364
CGCAEG ALV+H G+A V R+S +E A+R L VA H AT+AV+QEM G
Sbjct: 286 CGCAEGHLALVAHPTGLAAVACAATRLSTAGTESAMRALHVVATHTATSAVLQEMLAVGV 345
Query: 365 VEKLCVVAQSEQCG 378
+L + Q G
Sbjct: 346 GARLFFLVQVGASG 359
>Os04g0589700 U box domain containing protein
Length = 421
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG--TCPLTKQPVPPDCDPTPNHT 71
P F+CPIS+++M DPVT+ TG+TYDR IERW G TCP T Q + D TPNHT
Sbjct: 6 PPLFLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKTTCPATMQRL-ASFDFTPNHT 64
Query: 72 LRRLIQSW 79
L+R+I SW
Sbjct: 65 LKRVISSW 72
>Os02g0540700 Similar to Arm repeat-containing protein
Length = 505
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG-TCPLTKQPVPPDCDPTPNHTL 72
P++F CPISL +MR PV+L TG+TYDR I+RW+ + TCP T P+ P D PN TL
Sbjct: 76 PTFFRCPISLDVMRSPVSLCTGVTYDRASIQRWIDSGNTTCPATMLPL-PSTDLVPNLTL 134
Query: 73 RRLIQSW 79
RRLI W
Sbjct: 135 RRLIALW 141
>Os04g0437300 U box domain containing protein
Length = 426
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG--TCPLTKQPVPPDCDPTPNHT 71
P F CPISL I DPVTL TG TYDR IERW L AG TCP+T QP+ PN T
Sbjct: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERW-LAAGHRTCPVTMQPLGDATALVPNRT 62
Query: 72 LRRLIQSWCALHADHGVDL 90
LR LI+ W + H L
Sbjct: 63 LRHLIERWLSTDQHHNHHL 81
>Os03g0275900 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 726
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG--TCPLTKQPVPPDCDPTPNHT 71
P F CPISL +M+DPV + TG TY+R IERW L AG TCP T+Q + P+ TPN+
Sbjct: 295 PDDFRCPISLDLMKDPVIVATGQTYERGCIERW-LEAGHDTCPKTQQKL-PNKSLTPNYV 352
Query: 72 LRRLIQSWC 80
LR LI WC
Sbjct: 353 LRSLIAQWC 361
>Os02g0488701 U box domain containing protein
Length = 423
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG--TCPLTKQPVPPDCDPTPNHT 71
P F+CPIS +IMRDPV L +G TYDR I+ W L+AG TCP T+Q V + PNH
Sbjct: 40 PEQFLCPISSEIMRDPVVLASGQTYDRRFIQEW-LSAGNRTCPQTQQ-VLSNTILIPNHL 97
Query: 72 LRRLIQSWCALHADHGVDLVPTPKPPAD 99
+R +I WC ++G+ L P D
Sbjct: 98 VRSMIAQWC---TENGIALSPLENQEED 122
>Os04g0418500 U box domain containing protein
Length = 451
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG-TCPLTKQPVPPDCDPTPNHTL 72
PS+F CPISL +MR PV+L TG+TYDR I+RWL + TCP T P+ P D PN TL
Sbjct: 38 PSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPL-PSTDLVPNLTL 96
Query: 73 R 73
R
Sbjct: 97 R 97
>Os01g0823900 Arm repeat protein
Length = 680
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTA-GTCPLTKQPVPPDCDPTPNHTL 72
PS F CPISL +MRDPV + +G TYDR+ I+RW + TCP T Q V + + N L
Sbjct: 275 PSDFRCPISLDLMRDPVVVASGQTYDRESIDRWFSSGKSTCPKTGQ-VLANLELVSNKAL 333
Query: 73 RRLIQSWC 80
+ LI WC
Sbjct: 334 KNLISKWC 341
>Os03g0232600 U box domain containing protein
Length = 459
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWL-LTAGTCPLTKQPVPPDCDPTPNHTL 72
P+ F+CPISL+ M DPVTL TG TY+ I RWL L TCP T Q + D P PN TL
Sbjct: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQEL-WDVTPIPNTTL 124
Query: 73 RRLIQSW 79
R+LI +W
Sbjct: 125 RQLIAAW 131
>Os12g0570000 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 637
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTA-GTCPLTKQPVPPDCDPTPNHTL 72
P F CPISL++M+DPV + TG TY+R IE+W+ + TCP T+Q + TPN+ L
Sbjct: 217 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSA-LTPNYVL 275
Query: 73 RRLIQSWC 80
R LI WC
Sbjct: 276 RSLISQWC 283
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTA-GTCPLTKQPVPPDCDPTPNHTL 72
P F CPISL++M+DPV + +G TY+R I++WL + TCP T+QP+ TPN L
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPL-SHTSLTPNFVL 287
Query: 73 RRLIQSWC 80
+ LI WC
Sbjct: 288 KSLISQWC 295
>Os01g0229700 U box domain containing protein
Length = 1392
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG-TCPLTKQPVPPDCDPTPNHTL 72
P FVCPI+ Q+ DPVTL TG TY+R I+ WL TCP+T+ + P+ N+ L
Sbjct: 425 PKDFVCPITSQVFDDPVTLETGQTYERRAIQEWLDRGNATCPITRHRLHGAHLPSTNYVL 484
Query: 73 RRLIQSW 79
+RLI +W
Sbjct: 485 KRLIAAW 491
>Os05g0439400 Similar to Arm repeat containing protein
Length = 452
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG-TCPLTKQPVPPDCDPTPN 69
P+ F CPISL++MR PV+LPTG TYDR I+RWL T TCP T+ P+ D PN
Sbjct: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPL-ASTDLVPN 84
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,869,081
Number of extensions: 403323
Number of successful extensions: 1481
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 1463
Number of HSP's successfully gapped: 30
Length of query: 413
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 310
Effective length of database: 11,657,759
Effective search space: 3613905290
Effective search space used: 3613905290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)