BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0644400 Os04g0644400|AK071989
(182 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0644400 Similar to Proline-rich-like protein 176 1e-44
Os06g0168700 Similar to Prolin rich protein 94 5e-20
AK059170 94 5e-20
Os06g0643500 Similar to ADR11 protein (Fragment) 80 6e-16
Os04g0554800 Similar to RCc3 protein 74 8e-14
Os03g0103300 Plant lipid transfer/seed storage/trypsin-alph... 74 8e-14
Os04g0612300 Similar to Cell wall-plasma membrane linker pr... 72 2e-13
Os10g0349900 Similar to NT16 polypeptide 70 1e-12
Os06g0104800 69 2e-12
Os10g0552100 Similar to NT16 polypeptide 69 2e-12
Os02g0662000 RCc3 protein 69 3e-12
Os10g0552200 Plant lipid transfer/seed storage/trypsin-alph... 68 3e-12
Os04g0554600 Similar to RCc3 protein 68 3e-12
Os10g0554800 Similar to ExtA 68 4e-12
Os02g0662100 Similar to Tfm5 protein 68 4e-12
Os10g0349400 68 4e-12
Os04g0554500 Similar to RCc3 protein 68 4e-12
Os10g0349800 66 1e-11
Os03g0103200 Similar to Physical impedance induced protein 65 3e-11
Os10g0551900 Plant lipid transfer/seed storage/trypsin-alph... 64 5e-11
Os03g0103100 Similar to Physical impedance induced protein 64 6e-11
Os10g0552300 Similar to Root-specific protein (RCc2 protein) 64 8e-11
Os10g0349300 Similar to Root-specific protein (RCc2 protein) 63 1e-10
>Os04g0644400 Similar to Proline-rich-like protein
Length = 182
Score = 176 bits (445), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 91/107 (85%)
Query: 76 KRHGGRKACXXXXXXXXXXXXXXXXDTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVK 135
KRHGGRKAC DTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVK
Sbjct: 76 KRHGGRKACPPSPTPTPSTPTPSSSDTCPIDALKLGVCVDLLGNEVHIGDAHVTCCPLVK 135
Query: 136 DIAGLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPPGYTCA 182
DIAGLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPPGYTCA
Sbjct: 136 DIAGLSAAACLCTAIKAKVLDISIYIPIALKLLVNCGCDVPPGYTCA 182
>Os06g0168700 Similar to Prolin rich protein
Length = 246
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 102 TCPIDALKLGVCVDLLGNEVHI---GDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDIS 158
TCPIDALKL CVD+LG +H+ A CCPLV+ +A L AA CLCT I+A++L+I+
Sbjct: 158 TCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLLNIN 217
Query: 159 IYIPIALKLLVNCGCDVPPGYTC 181
IY+P+AL+LL+ CG PPG+ C
Sbjct: 218 IYLPVALELLITCGKHPPPGFKC 240
>AK059170
Length = 246
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 102 TCPIDALKLGVCVDLLGNEVHI---GDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDIS 158
TCPIDALKL CVD+LG +H+ A CCPLV+ +A L AA CLCT I+A++L+I+
Sbjct: 158 TCPIDALKLNACVDVLGGLIHLVIGQKARAKCCPLVQGVADLDAALCLCTTIRARLLNIN 217
Query: 159 IYIPIALKLLVNCGCDVPPGYTC 181
IY+P+AL+LL+ CG PPG+ C
Sbjct: 218 IYLPVALELLITCGKHPPPGFKC 240
>Os06g0643500 Similar to ADR11 protein (Fragment)
Length = 255
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Query: 103 CPIDALKLGVCVDLLGNEVH--IGDAHVT-CCPLVKDIAGLSAAACLCTAIKAKVLDISI 159
CP+D+LK+G CVDLLG VH IGD V CCPL++ + L AA CLCT I+ K+L+I+I
Sbjct: 172 CPVDSLKIGACVDLLGGLVHVGIGDPVVNKCCPLLEGLVELEAAVCLCTTIRLKLLNINI 231
Query: 160 YIPIALKLLVNCGCDVPPGYTCA 182
Y+P+AL+LL+ CG + PPGYTC+
Sbjct: 232 YLPLALQLLLTCGKNPPPGYTCS 254
>Os04g0554800 Similar to RCc3 protein
Length = 137
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 101 DTCPIDALKLGVCVDLLG---NEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDI 157
+ CP++ LK G C D+LG EV A CC L+ +A L AA CLCTAIKA VL +
Sbjct: 53 NKCPVNTLKFGACADVLGAISGEVGQVPAQ-PCCSLISGLADLEAAVCLCTAIKANVLGV 111
Query: 158 SIYIPIALKLLVN-CGCDVPPGYTCA 182
+ IP+ L LLVN CG VP GYTCA
Sbjct: 112 VVNIPVKLSLLVNYCGKCVPSGYTCA 137
>Os03g0103300 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
domain containing protein
Length = 184
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 103 CPIDALKLGVCVDLLGNEVHIG---DAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISI 159
CPID LKLGVC ++L +++ CC L++ +A L AA CLCTA++A +L I++
Sbjct: 100 CPIDTLKLGVCANVLNGLINVQLGTPPRQPCCSLIQGLADLEAAVCLCTALRANILGINL 159
Query: 160 YIPIALKLLVN-CGCDVPPGYTCA 182
+PI L LLVN CG VP G+ C+
Sbjct: 160 NLPINLSLLVNYCGRSVPSGFQCS 183
>Os04g0612300 Similar to Cell wall-plasma membrane linker protein homolog
Length = 202
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 103 CPIDALKLGVCVDLLGNEVHI---GDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISI 159
CP+D LKL CVD L VH A TCCPL+ +A L AA CLCTAIKAK L +S+
Sbjct: 112 CPVDTLKLLACVDALNGLVHAVVGATAGDTCCPLLSGVADLDAALCLCTAIKAKALGLSL 171
Query: 160 YIPIALKLLVN-CGCDVPPGYTC 181
+P+A+ +LVN CG VP + C
Sbjct: 172 VLPVAISVLVNDCGKYVPSDFQC 194
>Os10g0349900 Similar to NT16 polypeptide
Length = 126
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Query: 103 CPIDALKLGVCVDLLGN--EVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLD-ISI 159
CPIDALKL VC +LL V IG CCPL+ IA L AA CLCTA+KA VL I++
Sbjct: 44 CPIDALKLRVCANLLNGLIGVKIGRGPDDCCPLLAGIADLDAAVCLCTALKANVLGLINL 103
Query: 160 YIPIALKLLVN-CGCDVPPGYTC 181
+P+ L +++N CG + P G+TC
Sbjct: 104 NLPVDLSIILNKCGKNYPSGFTC 126
>Os06g0104800
Length = 122
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 103 CPIDALKLGVCVDLLGNEVHIGDA-HVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIYI 161
CPI+ +KLGVC D+L +H CCPL+ +A L AA C+C AI A +L +++ +
Sbjct: 41 CPINTVKLGVCADVLDGLIHASTPPKEPCCPLIAGLADLDAAVCVCLAINANLLGLNLDV 100
Query: 162 PIALKLLVN-CGCDVPPGYTCA 182
P+ L LL+N CGC +P G+ CA
Sbjct: 101 PVDLSLLLNYCGCKLPAGFKCA 122
>Os10g0552100 Similar to NT16 polypeptide
Length = 131
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 103 CPIDALKLGVCVDLLGN--EVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 160
CPIDALKL VC ++L V IG CC L++ IA L AA CLCTA+KA VL I++
Sbjct: 50 CPIDALKLRVCANVLNGLVGVKIGAGPNECCSLLQGIADLDAAVCLCTAVKANVLGINLN 109
Query: 161 IPIALKLLVN-CGCDVPPGYTC 181
+P+ L L++N C P G+TC
Sbjct: 110 LPVDLSLILNKCNKIYPSGFTC 131
>Os02g0662000 RCc3 protein
Length = 133
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Query: 103 CPIDALKLGVCVDLLG---NEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISI 159
CP DALKLGVC ++LG +V + A CCPL++ + L AA CLCTAI+ +L I++
Sbjct: 52 CPRDALKLGVCANVLGLIKAKVGVPPAE-PCCPLLEGLVDLEAAVCLCTAIRGNILGINL 110
Query: 160 YIPIALKLLVN-CGCDVPPGYTC 181
+PI L L++N CG VP G+ C
Sbjct: 111 NLPIDLSLILNYCGKTVPTGFKC 133
>Os10g0552200 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
domain containing protein
Length = 131
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 103 CPIDALKLGVCVDLLGN--EVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 160
CPIDALKL VC ++L V IG CC L++ IA L AA CLCTA+KA VL I++
Sbjct: 50 CPIDALKLRVCANVLNGLVGVKIGAGPNECCSLLQGIADLDAAVCLCTAVKANVLGINLN 109
Query: 161 IPIALKLLVN-CGCDVPPGYTC 181
+P+ L L++N C P G+TC
Sbjct: 110 LPVDLSLILNKCSKIYPSGFTC 131
>Os04g0554600 Similar to RCc3 protein
Length = 131
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Query: 103 CPIDALKLGVCVDLLG---NEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISI 159
CP DALKLGVC ++LG +V + A CCPL++ + L AA CLCTAIK +L I++
Sbjct: 49 CPRDALKLGVCANVLGLIKAKVGVPPAE-PCCPLLEGLVDLEAAVCLCTAIKGNILGINL 107
Query: 160 YIPIALKLLVN-CGCDVPPGYTC 181
+P+ L L++N CG VP G+ C
Sbjct: 108 NLPVDLSLILNYCGKRVPTGFKC 130
>Os10g0554800 Similar to ExtA
Length = 167
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 103 CPIDALKLGVC---VDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISI 159
CP DALKLGVC +DL+ + + A CCPL+ + L AA CLCTAIKA VL I++
Sbjct: 85 CPTDALKLGVCANVLDLIKAKAGV-PATEPCCPLLNGLVDLEAAVCLCTAIKANVLGINL 143
Query: 160 YIPIALKLLVN-CGCDVPPGYTCA 182
+PI L L++N CG VP G+ C+
Sbjct: 144 NLPIHLSLILNFCGKGVPTGFMCS 167
>Os02g0662100 Similar to Tfm5 protein
Length = 128
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 103 CPIDALKLGVCVDLLG-NEVHIGDA-HVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 160
CP +ALK C D+LG +G + CC ++ +A L AA CLCTAIKA VL I++
Sbjct: 46 CPKNALKFAACADVLGLVSAEVGQPPYEPCCGVLGGLADLEAAVCLCTAIKANVLGITLD 105
Query: 161 IPIALKLLVN-CGCDVPPGYTCA 182
IP+ L LLVN CG +VP G+ CA
Sbjct: 106 IPVKLSLLVNYCGKNVPSGFICA 128
>Os10g0349400
Length = 137
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 103 CPIDALKLGVCVDLLGN--EVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 160
CPI+ALKL VC ++L +V IG CC L+ IA L AA CLCTA+KA VL I +
Sbjct: 56 CPINALKLRVCANVLNRLVDVKIGHGPDDCCSLLSGIADLDAAVCLCTAVKANVLGIRVN 115
Query: 161 IPIALKLLVN-CGCDVPPGYTC 181
+P+ L L++N CG P +TC
Sbjct: 116 LPVDLSLILNKCGKSCPSDFTC 137
>Os04g0554500 Similar to RCc3 protein
Length = 130
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Query: 103 CPIDALKLGVCVDLLG---NEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISI 159
CP DALKLGVC ++LG +V + A CCPL++ + L AA CLCTAI+ +L I++
Sbjct: 49 CPRDALKLGVCANVLGLIKAKVGVPPAE-PCCPLLEGLVDLEAAVCLCTAIRGNILGINL 107
Query: 160 YIPIALKLLVN-CGCDVPPGYTC 181
+P+ L L++N CG VP G+ C
Sbjct: 108 NLPVDLSLILNYCGKRVPTGFKC 130
>Os10g0349800
Length = 130
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 103 CPIDALKLGVCVDLLGN--EVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 160
CP+DALKL VC ++L +V IG CC L+ IA + AA CLCTA+KA VL I +
Sbjct: 49 CPMDALKLRVCANVLKGLVDVEIGHGPDDCCSLLSGIADIDAAVCLCTAVKANVLGIRVN 108
Query: 161 IPIALKLLVN-CGCDVPPGYTC 181
+P+ L L++N CG P +TC
Sbjct: 109 LPVDLSLILNKCGKTCPSDFTC 130
>Os03g0103200 Similar to Physical impedance induced protein
Length = 141
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 101 DTCPIDALKLGVCVDLLGN-EVHIG-DAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDIS 158
+ CPIDALKLGVC ++L ++ +G A CCPL+ + L AA CLCTAIKA VL I+
Sbjct: 55 NKCPIDALKLGVCANVLNLLKLKVGVPASEECCPLLGGLVDLDAAVCLCTAIKANVLGIN 114
Query: 159 IYIPIALKLLVN-CGCDVPPGYTC 181
I +P+ L LL+N C P ++C
Sbjct: 115 INVPVDLVLLLNYCHKTCPSDFSC 138
>Os10g0551900 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
domain containing protein
Length = 142
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 103 CPIDALKLGVCVDLLGN--EVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLD-ISI 159
CPIDALKL VC ++L V IG CCPL+ +A L AA CLCTAIKA VL I++
Sbjct: 60 CPIDALKLRVCANVLNGLVGVKIGAGPDDCCPLLSGLADLDAAVCLCTAIKANVLGIINL 119
Query: 160 YIPIALKLLV-NCGCDVPPGYTC 181
IP+ L L++ NCG P +TC
Sbjct: 120 NIPVDLSLILNNCGKICPSDFTC 142
>Os03g0103100 Similar to Physical impedance induced protein
Length = 138
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 101 DTCPIDALKLGVC---VDLLGNEVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDI 157
+ CPIDALKL VC ++LL ++ + ++ CCPL+ + L AA CLCTAIKA +L I
Sbjct: 53 NKCPIDALKLSVCANVLNLLKLKIGVPESE-QCCPLLGGLVDLDAAVCLCTAIKANILGI 111
Query: 158 SIYIPIALKLLVN-CGCDVPPGYTC 181
++ IP+ L LL+N C P +TC
Sbjct: 112 NLNIPVDLSLLLNYCHKTCPSDFTC 136
>Os10g0552300 Similar to Root-specific protein (RCc2 protein)
Length = 136
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 103 CPIDALKLGVCVDLLGN--EVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 160
CPIDALKL VC ++L V IG CCPL+ +A L AA CLCTA+KA VL + +
Sbjct: 55 CPIDALKLRVCTNVLNGLVGVKIGAGPDDCCPLLSGLADLDAAVCLCTAVKANVLGMKLN 114
Query: 161 IPIALKLLVN-CGCDVPPGYTC 181
+ + L L++N CG P +TC
Sbjct: 115 LAVDLSLILNKCGKICPSDFTC 136
>Os10g0349300 Similar to Root-specific protein (RCc2 protein)
Length = 137
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 103 CPIDALKLGVCVDLLGN--EVHIGDAHVTCCPLVKDIAGLSAAACLCTAIKAKVLDISIY 160
CPI+ LKL VC ++L + IG CC L+ IA L AA CLCTA+KA VL I +
Sbjct: 56 CPINTLKLRVCANVLNGLVDAKIGHGTDDCCSLLSGIADLDAAVCLCTAVKANVLGIRVN 115
Query: 161 IPIALKLLVN-CGCDVPPGYTC 181
+P+ L +++N CG P +TC
Sbjct: 116 LPVDLSIMLNKCGKTCPSDFTC 137
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,709,049
Number of extensions: 107447
Number of successful extensions: 325
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 295
Number of HSP's successfully gapped: 28
Length of query: 182
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 87
Effective length of database: 12,075,471
Effective search space: 1050565977
Effective search space used: 1050565977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 153 (63.5 bits)