Os06g0643500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADR11 protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os06g0643500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to ADR11 protein (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.12 | 0.611 | 2.96 | -0.556 | 0.17 | 0.829 | -0.25 | -2.66 | -0.11 | 13.7 | 1 | 48 | -- | -- |
| 171.88 | 0.611 | 2.94 | -0.432 | 0.159 | 0.59 | -0.197 | -- | -0.0947 | 13 | 1.198 | 47 | -- | -- |
| 168.47 | 0.605 | 2.95 | -0.565 | 0.173 | 0.772 | -- | -2.32 | -0.111 | 13.3 | 1.1 | 48 | -- | -- |
| 171.65 | 0.61 | 2.93 | -0.466 | 0.16 | 0.545 | -- | -- | -0.0965 | 13.5 | 1.199 | 47 | -- | -- |
| 170.12 | 0.607 | 2.96 | -0.562 | -- | 0.673 | -- | -2.2 | -0.118 | -- | 1.198 | 46 | -- | -- |
| 176.79 | 0.623 | 2.94 | -0.393 | 0.127 | -- | -0.137 | -- | -0.125 | 9.33 | -- | -- | -- | -- |
| 176.85 | 0.623 | 2.94 | -0.398 | 0.128 | -- | -- | -- | -0.125 | 9.24 | -- | -- | -- | -- |
| 173.13 | 0.613 | 2.93 | -0.46 | -- | 0.462 | -- | -- | -0.105 | -- | 1.197 | 47 | -- | -- |
| 177.22 | 0.62 | 2.92 | -- | 0.155 | 0.459 | -- | -- | -0.0516 | 13.1 | 1.157 | 47 | -- | -- |
| 177.81 | 0.623 | 2.94 | -0.398 | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
| 181.02 | 0.629 | 2.93 | -- | 0.129 | -- | -- | -- | -0.0807 | 9.47 | -- | -- | -- | -- |
| 178.6 | 0.622 | 2.92 | -- | -- | 0.389 | -- | -- | -0.0578 | -- | 1.103 | 47 | -- | -- |
| 181.99 | 0.63 | 2.93 | -- | -- | -- | -- | -- | -0.0802 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.04 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 162.28 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 6 | 163.72 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 10 | 163.72 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 17 | 165.37 | wind | 1.0 | 90 | < th | dose independent | rect. | 13 | 3 |
| 19 | 165.48 | wind | 1.0 | 90 | < th | dose independent | rect. | 13 | 5 |
| 23 | 165.49 | wind | 3.0 | 10 | < th | dose dependent | rect. | 15 | 2 |
| 29 | 165.69 | wind | 1.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 48 | 166.16 | wind | 3.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 64 | 166.44 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 73 | 166.57 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 138 | 167.53 | wind | 1.0 | 30 | > th | dose independent | rect. | 16 | 23 |
| 140 | 167.62 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 150 | 167.85 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 157 | 167.85 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 182 | 168.08 | temperature | 25.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 216 | 168.55 | wind | 1.0 | 30 | < th | dose independent | rect. | 3 | 15 |
| 221 | 168.57 | wind | 1.0 | 30 | < th | dose independent | rect. | 3 | 13 |
| 254 | 168.99 | wind | 3.0 | 30 | < th | dose dependent | rect. | 15 | 17 |
| 269 | 169.28 | radiation | 10.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 271 | 169.31 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 297 | 169.54 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 313 | 169.61 | radiation | 1.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 331 | 169.70 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 363 | 169.89 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 380 | 169.92 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 406 | 170.06 | wind | 1.0 | 30 | < th | dose independent | rect. | 13 | 18 |
| 439 | 170.10 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 446 | 170.10 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 451 | 170.11 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 16 |
| 454 | 170.12 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 5 |
| 523 | 170.15 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 21 |
| 553 | 170.22 | wind | 3.0 | 30 | < th | dose dependent | rect. | 10 | 22 |
| 560 | 170.25 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 654 | 170.35 | precipitation | 0.1 | 10 | < th | dose independent | sin | 6 | NA |
| 656 | 170.35 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 6 | NA |
| 657 | 170.36 | wind | 3.0 | 30 | < th | dose dependent | rect. | 3 | 14 |
| 675 | 170.43 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 687 | 170.46 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 7 | NA |
| 690 | 170.47 | precipitation | 0.1 | 10 | > th | dose independent | sin | 7 | NA |
| 742 | 170.59 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 10 |
| 746 | 170.61 | wind | 9.0 | 30 | < th | dose independent | rect. | 16 | 23 |
| 747 | 170.61 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 23 |
| 749 | 170.61 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 23 |
| 768 | 170.67 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 787 | 170.71 | humidity | 80.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 805 | 170.74 | humidity | 90.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 813 | 170.76 | humidity | 50.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 821 | 170.76 | wind | 7.0 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 836 | 170.79 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 17 |
| 838 | 170.80 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 839 | 170.80 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 847 | 170.81 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 5 |
| 864 | 170.84 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 868 | 170.85 | wind | 1.0 | 30 | < th | dose independent | rect. | 23 | 17 |
| 886 | 170.86 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 1 |
| 892 | 170.86 | wind | 1.0 | 30 | > th | dose independent | rect. | 16 | 20 |
| 902 | 170.86 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 907 | 170.87 | wind | 1.0 | 30 | < th | dose independent | no | NA | NA |
| 913 | 170.87 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 23 |
| 936 | 170.91 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 13 |