BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0169600 Os03g0169600|AK099490
(440 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0169600 Zinc finger, Dof-type family protein 836 0.0
Os01g0263900 Zinc finger, Dof-type family protein 160 2e-39
Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-bi... 156 2e-38
Os07g0685000 Similar to Dof3 gene (Fragment) 151 8e-37
Os01g0277500 Similar to Dof3 gene (Fragment) 136 3e-32
Os01g0758200 Similar to Dof2 (Fragment) 115 6e-26
Os07g0236700 Similar to Dof2 (Fragment) 102 5e-22
Os03g0764900 Similar to Zn finger protein (Fragment) 101 1e-21
Os08g0490100 Similar to PBF protein 101 1e-21
Os03g0276300 100 2e-21
Os03g0821200 Similar to Zn finger protein (Fragment) 100 2e-21
Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-bi... 100 2e-21
Os07g0508900 Zinc finger, Dof-type family protein 98 1e-20
Os03g0585600 98 1e-20
Os09g0475800 Similar to Zn finger protein (Fragment) 98 1e-20
Os02g0707200 Similar to Zn finger protein (Fragment) 98 1e-20
Os02g0252400 Similar to Zn finger protein (Fragment) 97 2e-20
Os05g0112200 Similar to Zn finger protein (Fragment) 97 3e-20
Os01g0193300 97 3e-20
Os12g0590700 94 2e-19
Os06g0284500 Zinc finger, Dof-type family protein 94 3e-19
Os02g0673700 Zinc finger, Dof-type family protein 94 3e-19
Os05g0440000 Zinc finger, Dof-type family protein 94 3e-19
Os12g0569900 Similar to Zn finger protein (Fragment) 94 3e-19
Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-bi... 94 3e-19
AB028133 92 1e-18
Os03g0619100 Zinc finger, Dof-type family protein 92 1e-18
Os01g0673700 88 2e-17
Os04g0678400 Zinc finger, Dof-type family protein 80 2e-15
Os10g0496000 Zinc finger, Dof-type family protein 78 1e-14
>Os03g0169600 Zinc finger, Dof-type family protein
Length = 440
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/440 (92%), Positives = 406/440 (92%)
Query: 1 MGECKVXXXXXXXDCLIKLFGKTIPVPEPGACAAGDVDKDLQHSGSSTTEPKTQENTVQD 60
MGECKV DCLIKLFGKTIPVPEPGACAAGDVDKDLQHSGSSTTEPKTQENTVQD
Sbjct: 1 MGECKVGGGGGGGDCLIKLFGKTIPVPEPGACAAGDVDKDLQHSGSSTTEPKTQENTVQD 60
Query: 61 STSPPPQPEVVDTEDSSADKNSSENQQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCY 120
STSPPPQPEVVDTEDSSADKNSSENQQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCY
Sbjct: 61 STSPPPQPEVVDTEDSSADKNSSENQQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCY 120
Query: 121 YNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSVSAASHFLQRVRAALPGDPP 180
YNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSVSAASHFLQRVRAALPGDPP
Sbjct: 121 YNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSVSAASHFLQRVRAALPGDPP 180
Query: 181 LYAPVKTNGTVLSFGSDLSTLDLTEQMKHLKDKFIPTTGIKNTDEMPVGLCAEGLSKTEE 240
LYAPVKTNGTVLSFGSDLSTLDLTEQMKHLKDKFIPTTGIKNTDEMPVGLCAEGLSKTEE
Sbjct: 181 LYAPVKTNGTVLSFGSDLSTLDLTEQMKHLKDKFIPTTGIKNTDEMPVGLCAEGLSKTEE 240
Query: 241 SNQTNLKEKVSADRSPNVAQHPCMNGGAMWPFGVAPPPAYYTSSIAIPFYPXXXXXXXXY 300
SNQTNLKEKVSADRSPNVAQHPCMNGGAMWPFGVAPPPAYYTSSIAIPFYP Y
Sbjct: 241 SNQTNLKEKVSADRSPNVAQHPCMNGGAMWPFGVAPPPAYYTSSIAIPFYPAAAAAVAAY 300
Query: 301 WGCMVPGAWNAPWXXXXXXXXXXXXXXXXXXXTMTNCFRLGKHPRDGDEELDSKGNGKVW 360
WGCMVPGAWNAPW TMTNCFRLGKHPRDGDEELDSKGNGKVW
Sbjct: 301 WGCMVPGAWNAPWPPQSQSQSVSSSSAASPVSTMTNCFRLGKHPRDGDEELDSKGNGKVW 360
Query: 361 VPKTVRIDDVDEVARSSIWSLIGIKGDKVGADHGRGCKLAKVFESKDEAKASTHTAISSL 420
VPKTVRIDDVDEVARSSIWSLIGIKGDKVGADHGRGCKLAKVFESKDEAKASTHTAISSL
Sbjct: 361 VPKTVRIDDVDEVARSSIWSLIGIKGDKVGADHGRGCKLAKVFESKDEAKASTHTAISSL 420
Query: 421 PFMQGNPAALTRSVTFQEGS 440
PFMQGNPAALTRSVTFQEGS
Sbjct: 421 PFMQGNPAALTRSVTFQEGS 440
>Os01g0263900 Zinc finger, Dof-type family protein
Length = 496
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 126/232 (54%), Gaps = 30/232 (12%)
Query: 67 QPEVVDTEDSSADKNSSENQQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCYYNNYNI 126
Q ++ + E+ +A + EN++ D + Q + LKKPDKILPCPRC+SMDTKFCYYNNYN+
Sbjct: 66 QGQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYYNNYNV 125
Query: 127 NQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSVSAA-SHFLQ--------RVRAALPG 177
NQPRHFCKNCQRYWTAGG MRNVPVGAGRRKSKS S H L RV +
Sbjct: 126 NQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLMAPDCMMGSRVEISKSM 185
Query: 178 DPPLYA--------PVKTNGTVLSFGSDLSTLDLTEQMKHLKDKFIPTTGIKNTDEMPVG 229
+P +A P+ N TVL FG ++ L E M + + I N +P G
Sbjct: 186 NPEAFASAHSTPIQPIGRNETVLKFGPEVP---LCESMASVLN--IQEQNGTNAAAVPTG 240
Query: 230 LCAEGLSKTEESNQTNLKEKVSADRSPNVAQHPCMNGGAMWPFGVAPPPAYY 281
+ +E N + S + P A N ++ GV P P YY
Sbjct: 241 -------ENQEDNSC-ISSITSHNVLPENAAQVDKNSTPVYCNGVGPVPQYY 284
>Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 194
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 101/158 (63%), Gaps = 19/158 (12%)
Query: 1 MGECKVXXXXXXXDCLIKLFGKTIPVPEPGACAAGDVDKDLQHSGSSTTEPK---TQENT 57
MGEC+ LIKLFGKTIPV +P A KD+Q S++ QE
Sbjct: 1 MGECRGGGGGGDG--LIKLFGKTIPV-QPDA-------KDVQQHSGSSSSSTESDVQETA 50
Query: 58 VQDSTSPPPQPEVVDTEDSSADKNSSENQQQQGDTANQKE-KLKKPDKILPCPRCSSMDT 116
P P+ EVVD E + + QQQ QKE KLKKPDKILPCPRCSSMDT
Sbjct: 51 AVAVADPSPRSEVVDGESPPQPGGEAASHQQQ-----QKEMKLKKPDKILPCPRCSSMDT 105
Query: 117 KFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAG 154
KFCY+NNYN+NQPRHFCK+CQRYWTAGGAMRNVPVGAG
Sbjct: 106 KFCYFNNYNVNQPRHFCKHCQRYWTAGGAMRNVPVGAG 143
>Os07g0685000 Similar to Dof3 gene (Fragment)
Length = 476
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 103/151 (68%), Gaps = 13/151 (8%)
Query: 74 EDSSADKNSSENQQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFC 133
++ + ++ SE Q +G +++++ LKKPDKILPCPRC+SMDTKFCYYNNYNINQPRHFC
Sbjct: 76 DEMTGSESKSEAAQTEGGGSSEEKVLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFC 135
Query: 134 KNCQRYWTAGGAMRNVPVGAGRRKSKSVSA--ASHFLQRVRAALP-GDPPLYA-PVKTN- 188
K+CQRYWTAGG+MRN+PVGAGRRKSKS +A S + A P GD PLY +K +
Sbjct: 136 KSCQRYWTAGGSMRNLPVGAGRRKSKSSTANYRSILITGSNLAAPAGDAPLYQLSIKGDQ 195
Query: 189 -GTVLSFGSD-------LSTLDLTEQMKHLK 211
T + F D S L + EQ K+ K
Sbjct: 196 TATAVKFAPDSPLCNSMASVLKIGEQSKNAK 226
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 13/100 (13%)
Query: 340 LGKHPRDGDEELDSKGNGKVWVPKTVRIDDVDEVARSSIWSLIGIK-GDKVGADHGRGCK 398
LGKH RD + D K +W+PKT+RIDD DE A+SSIW+ +GI+ GD+
Sbjct: 387 LGKHSRDSKPQGDDKAEKNLWIPKTLRIDDPDEAAKSSIWTTLGIEPGDR---------S 437
Query: 399 LAKVFESKDEAKASTHTAISSLPFMQGNPAALTRSVTFQE 438
+ + F+SK E++ A L Q NPAAL+RS +FQE
Sbjct: 438 MFRSFQSKPESREQISGAARVL---QANPAALSRSQSFQE 474
>Os01g0277500 Similar to Dof3 gene (Fragment)
Length = 490
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 104/172 (60%), Gaps = 15/172 (8%)
Query: 83 SENQQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTA 142
+E+ + + D + ++ LKKPDKILPCPRC+SM+TKFCY+NNYN++QPRHFC+NCQRYWTA
Sbjct: 91 TEDVKTEPDGSVPEKILKKPDKILPCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTA 150
Query: 143 GGAMRNVPVGAGRRKSKSVSAASHFLQRVRAAL-PGDPPLYAPVKTNGTVLSFGSDLSTL 201
GGAMRNVPVGAGRR++K VS + + PGD + V++ GS L L
Sbjct: 151 GGAMRNVPVGAGRRRNKHVSKYCQAMMTCNNTVAPGD----VSDVVHHQVITHGSSL--L 204
Query: 202 DLTEQMKHLKDKFIPTTGIKNTDEMPVGLCAEGLSKTEESNQTNLKEKVSAD 253
T LK+ PT I E+P + + E N T+L S D
Sbjct: 205 PAT-----LKENETPTEFI---SEVPPCKSSASILDIGEPNDTDLVPLASGD 248
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 340 LGKHPRDGDEELDSKGNGKVWVPKTVRIDDVDEVARSSIWSLIGIKGDKVGADHGRGCKL 399
LGKH R+ + + K +WVPKT+RIDD E A+SSIW+ +GIK D G
Sbjct: 401 LGKHSREESLQEEEKTRNYLWVPKTLRIDDPAEAAKSSIWATLGIKPDDKG--------- 451
Query: 400 AKVFESKDEAKASTHTAISSLPFMQGNPAALTRSVTFQE 438
+F+S A TA S +Q NPAA +RS +FQE
Sbjct: 452 --IFKSFQPNVAKNGTAPESPQALQANPAAFSRSQSFQE 488
>Os01g0758200 Similar to Dof2 (Fragment)
Length = 211
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 10/94 (10%)
Query: 77 SADKNSSENQQQQGDTANQKEKLKKPDKI---------LPCPRCSSMDTKFCYYNNYNIN 127
+AD++ E +Q GD A Q + + D LPCPRC S DTKFCY+NNYN+N
Sbjct: 72 AADRDE-EQRQGGGDAAGQPTQRRLQDSAEARAAAAAPLPCPRCRSRDTKFCYFNNYNVN 130
Query: 128 QPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSV 161
QPRHFCK C RYWTAGGA+RNVPVGAGRRK++ +
Sbjct: 131 QPRHFCKACHRYWTAGGALRNVPVGAGRRKNRPL 164
>Os07g0236700 Similar to Dof2 (Fragment)
Length = 332
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 52/65 (80%)
Query: 95 QKEKLKKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAG 154
+ K+ +P+ L CPRC S +TKFCY+NNY++ QPRHFCK C+RYWT GGA+RNVPVG G
Sbjct: 42 RMAKIPQPEPGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRNVPVGGG 101
Query: 155 RRKSK 159
R++K
Sbjct: 102 FRRNK 106
>Os03g0764900 Similar to Zn finger protein (Fragment)
Length = 359
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%)
Query: 106 LPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSVSA 163
L CPRC+S +TKFCYYNNYN+ QPRHFCK C+RYWT GGA+RNVP+G G RK + + A
Sbjct: 79 LRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRPMPA 136
>Os08g0490100 Similar to PBF protein
Length = 276
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 43/51 (84%)
Query: 107 PCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRK 157
PCPRC S DTKFCYYNNYN +QPRHFCK C+RYWT GG +RNVPVG G RK
Sbjct: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
>Os03g0276300
Length = 403
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 98 KLKKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRK 157
+ +P+ L CPRC S +TKFCYYNNY+++QPRHFCK C+RYWT GG++RNVPVG G R+
Sbjct: 83 RAPQPEPALKCPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRR 142
Query: 158 SK 159
+K
Sbjct: 143 NK 144
>Os03g0821200 Similar to Zn finger protein (Fragment)
Length = 414
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 52/62 (83%)
Query: 98 KLKKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRK 157
K+ +P+ L CPRC S +TKFCY+NNY+++QPRHFCK C+RYWT GGA+RNVPVG G R+
Sbjct: 110 KIPQPEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRR 169
Query: 158 SK 159
+K
Sbjct: 170 NK 171
>Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 282
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Query: 86 QQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGA 145
Q QQG A++ + P+ + CPRC S +TKFCYYNNYN++QPRHFCK+C+RYWT GG
Sbjct: 27 QAQQG-PASRCGGIPSPEAV-KCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGV 84
Query: 146 MRNVPVGAGRRKSK 159
+RNVPVG G RK+K
Sbjct: 85 LRNVPVGGGCRKTK 98
>Os07g0508900 Zinc finger, Dof-type family protein
Length = 359
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 47/56 (83%)
Query: 104 KILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSK 159
+ L CPRC S +TKFCYYNNY+++QPRHFCK C+RYWT GG +RNVPVG G RK+K
Sbjct: 47 EALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNK 102
>Os03g0585600
Length = 371
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 47/54 (87%)
Query: 106 LPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSK 159
L CPRC S +TKFCYYNNY+++QPRHFCK C+RYWT GGA+RNVPVG G RK+K
Sbjct: 48 LRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNK 101
>Os09g0475800 Similar to Zn finger protein (Fragment)
Length = 230
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 107 PCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRR 156
PCPRC S DTKFCYYNNYN +QPRHFCK+C+RYWT GG++RNVPVG G R
Sbjct: 43 PCPRCESRDTKFCYYNNYNTSQPRHFCKSCRRYWTKGGSLRNVPVGGGSR 92
>Os02g0707200 Similar to Zn finger protein (Fragment)
Length = 281
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 48/57 (84%)
Query: 103 DKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSK 159
D+ L CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G RK+K
Sbjct: 34 DQPLKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNVPVGGGCRKNK 90
>Os02g0252400 Similar to Zn finger protein (Fragment)
Length = 373
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 11/95 (11%)
Query: 67 QPEVVDTEDSSADKNSSENQQQQGDTA--NQKEKLKKPDKILPCPRCSSMDTKFCYYNNY 124
+P VV T +E +++ A + E +KK CPRC+S+ TKFCYYNNY
Sbjct: 13 KPTVVKT-------TKAEQHEEEAAVAVKSAAEMMKKSSPC--CPRCNSIKTKFCYYNNY 63
Query: 125 NINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSK 159
++ QPR+FC+ C+RYWT GG++RNVPVG G RKSK
Sbjct: 64 SMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSK 98
>Os05g0112200 Similar to Zn finger protein (Fragment)
Length = 290
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 98 KLKKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRK 157
++ P+ L CPRC S +TKFCY+NNY+++QPRHFC+ C+RYWT GGA+RNVPVG G R+
Sbjct: 32 RIPLPEPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRR 91
>Os01g0193300
Length = 215
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 106 LPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRR 156
L CPRC S +TKFCYYNNYN+ QPRHFCK C+RYWT GGA+RNVPVG G R
Sbjct: 30 LACPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTRGGALRNVPVGGGTR 80
>Os12g0590700
Length = 265
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 42/50 (84%)
Query: 108 CPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRK 157
CPRC+S DTKFCYYNNYN QPRHFC+ C+RYWT GG++RNVP+G RK
Sbjct: 53 CPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPIGGSTRK 102
>Os06g0284500 Zinc finger, Dof-type family protein
Length = 289
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 41/47 (87%)
Query: 108 CPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAG 154
CPRC S +TKFCYYNNYN++QPRHFCK C+RYWT GG +RNVPVG G
Sbjct: 32 CPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGG 78
>Os02g0673700 Zinc finger, Dof-type family protein
Length = 375
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%), Gaps = 2/60 (3%)
Query: 97 EKLKKP--DKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAG 154
E+ +P +K L CPRC+S +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G
Sbjct: 63 ERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGG 122
>Os05g0440000 Zinc finger, Dof-type family protein
Length = 327
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 46/52 (88%)
Query: 108 CPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSK 159
CPRC S +TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G RK++
Sbjct: 40 CPRCESPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNR 91
>Os12g0569900 Similar to Zn finger protein (Fragment)
Length = 348
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 46/53 (86%)
Query: 106 LPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKS 158
L CPRC S +TKFCY+NNY+++QPRHFCK C+RYWT GGA+RNVPVG G R++
Sbjct: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
>Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 320
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 46/52 (88%)
Query: 108 CPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSK 159
CPRC S +TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G RK++
Sbjct: 27 CPRCDSPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNR 78
>AB028133
Length = 235
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 50/77 (64%), Gaps = 10/77 (12%)
Query: 77 SADKNSSENQQQQGDTANQKEKLKKPDKI---------LPCPRCSSMDTKFCYYNNYNIN 127
+AD++ E +Q GD A Q + + D LPCPRC S DTKFCY+NNYN+N
Sbjct: 79 AADRDE-EQRQGGGDAAGQPTQRRLQDSAEARAAAAAPLPCPRCRSRDTKFCYFNNYNVN 137
Query: 128 QPRHFCKNCQRYWTAGG 144
QPRHFCK C RYWTAGG
Sbjct: 138 QPRHFCKACHRYWTAGG 154
>Os03g0619100 Zinc finger, Dof-type family protein
Length = 202
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 108 CPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVG 152
CPRC+S DTKFCYYNNYN +QPRHFC+ C+RYWT GG++RNVP+G
Sbjct: 51 CPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIG 95
>Os01g0673700
Length = 175
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 39/44 (88%)
Query: 106 LPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNV 149
LPCPRC S +TKFCY+NNYN+ QPRH C++C+RYWTAGGA+R V
Sbjct: 84 LPCPRCGSRETKFCYFNNYNVRQPRHLCRSCRRYWTAGGALRRV 127
>Os04g0678400 Zinc finger, Dof-type family protein
Length = 207
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 108 CPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPV 151
CPRC S +TKFCYYNNY+ +QPRHFC+ C+RYWT GG +R+VPV
Sbjct: 52 CPRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPV 95
>Os10g0496000 Zinc finger, Dof-type family protein
Length = 247
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 111 CSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSK 159
C S +TKFCYYNNY+ QPR+ CK C+R+WT GG +R+VPVG GR+ SK
Sbjct: 83 CGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKNSK 131
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.130 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,461,084
Number of extensions: 728240
Number of successful extensions: 2520
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 2514
Number of HSP's successfully gapped: 32
Length of query: 440
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 336
Effective length of database: 11,605,545
Effective search space: 3899463120
Effective search space used: 3899463120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 157 (65.1 bits)