BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0132200 Os03g0132200|AK099870
(279 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0132200 Expansin-like protein A 435 e-122
Os10g0542400 Expansin/Lol pI family protein 315 2e-86
Os07g0475400 Similar to Expansin-like protein A (Fragment) 252 2e-67
Os06g0725300 Expansin/Lol pI family protein 174 5e-44
Os03g0106900 Beta-expansin precursor (Beta-expansin 1) 82 3e-16
Os03g0106500 Beta-expansin precursor (Beta-expansin 1) 82 3e-16
Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10) 82 4e-16
Os10g0555900 Beta-expansin precursor 79 3e-15
Os02g0658800 Beta-expansin 77 1e-14
Os03g0102700 Beta-expansin precursor 75 4e-14
Os05g0246300 Expansin/Lol pI family protein 75 4e-14
Os04g0552000 Expansin/Lol pI family protein 75 7e-14
Os04g0552200 Beta-expansin 5 72 5e-13
Os10g0548600 Beta-expansin precursor 70 2e-12
Os10g0555700 Beta-expansin 70 2e-12
Os03g0102500 Similar to Beta-expansin precursor (Fragment) 67 1e-11
Os02g0658600 Similar to Beta-expansin (Fragment) 66 4e-11
Os10g0556100 beta-expansin EXPB4 [Oryza sativa (japonica cu... 65 5e-11
>Os03g0132200 Expansin-like protein A
Length = 279
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/279 (78%), Positives = 220/279 (78%)
Query: 1 MAVSVRCCFGXXXXXXXXXXXXXXXXXXXXXXXSGCDRCVRRSRAAYYTSSLTLTAGSCX 60
MAVSVRCCFG SGCDRCVRRSRAAYYTSSLTLTAGSC
Sbjct: 1 MAVSVRCCFGSSSLSHHARLLLVIVALLAPRLASGCDRCVRRSRAAYYTSSLTLTAGSCG 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRT 120
RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRT
Sbjct: 61 YGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRT 120
Query: 121 GLVLSSXXXXXXXXXXXXXSLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTIS 180
GLVLSS SLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTIS
Sbjct: 121 GLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTIS 180
Query: 181 FLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVW 240
FLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVW
Sbjct: 181 FLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVW 240
Query: 241 ADREVLPRRWRAGEVYDTGVQITDIAQEGCFPCDTHEWK 279
ADREVLPRRWRAGEVYDTGVQITDIAQEGCFPCDTHEWK
Sbjct: 241 ADREVLPRRWRAGEVYDTGVQITDIAQEGCFPCDTHEWK 279
>Os10g0542400 Expansin/Lol pI family protein
Length = 275
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/248 (65%), Positives = 180/248 (72%), Gaps = 3/248 (1%)
Query: 34 SGCDRCVRRSRAAYYTSSLTLTAGSCXXXXXXXXXXXXXXXXXXXXXXXRGGVGCGACYQ 93
SGCDRCVRRS+A + SS+ L AGSC RGGVGCGAC+Q
Sbjct: 29 SGCDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGGHLAAASPALF-RGGVGCGACFQ 87
Query: 94 VRCKDKKLCSNAGARVVVTDRAR-TNRTGLVLSSXXXXXXXXXXXXXSLTELAAVDVEYK 152
VRCKD KLCS AGA+VVVTD AR TNRT LVLS+ L AVDVEYK
Sbjct: 88 VRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMAAQLRTRRAVDVEYK 147
Query: 153 RVPCEYRH-RSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHG 211
RVPCEY R+LS+RV+E+SR P EL+I FLYQGGQTDIVAVDVA VGSS+WKFMTR++G
Sbjct: 148 RVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYG 207
Query: 212 PSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIAQEGCF 271
P+WS A AP GPLQ R+VVTGGYDGKWVWAD EVLPRRW AG VYD GVQI D+AQEGC+
Sbjct: 208 PAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIADVAQEGCY 267
Query: 272 PCDTHEWK 279
PCDT EWK
Sbjct: 268 PCDTQEWK 275
>Os07g0475400 Similar to Expansin-like protein A (Fragment)
Length = 276
Score = 252 bits (643), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 146/197 (74%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSXXXXXXXXXXXXXSLT 142
RGG+GCG C+Q+RC++ ++CSNAG RVV+TD R+N T +L L
Sbjct: 80 RGGLGCGRCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLK 139
Query: 143 ELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSS 202
+L A+ VEY+R+PC+Y+ ++LS+ V+E+S+ PN L I FLYQGGQTDI+AVDVAQVGSS
Sbjct: 140 KLDALSVEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSD 199
Query: 203 WKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQI 262
W+FMTR +GP WS+ AP GPLQ R VVTGGYDGKWVWADREVLP W+ G+VYDTG +I
Sbjct: 200 WRFMTRVYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLPANWQPGQVYDTGARI 259
Query: 263 TDIAQEGCFPCDTHEWK 279
D+A+E C C T +WK
Sbjct: 260 ADVARESCLDCATLDWK 276
>Os06g0725300 Expansin/Lol pI family protein
Length = 313
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 24/212 (11%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRAR-------TNRTG------LVLSSXXX 129
R G CGACYQ+RC+D++LC G +VVV D A+ NRT +
Sbjct: 82 RHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQEGEMNRTAGGSLQFRITEDAFA 141
Query: 130 XXXXXXXXXXSLTELAAVDVEYKRVPCEYRH-RSLSVRVDERSRGPNELTISFLYQGGQT 188
LT ++V+++R+PCEYR R L+VRV+E SR P L I FLYQGGQT
Sbjct: 142 AMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQT 201
Query: 189 DIVAVDVAQVGSSS--------WKFMTREHGPS--WSMANAPPGPLQMRLVVTGGYDGKW 238
DI AV++AQ ++ W++MTR G W+ + AP GPL++R+VVT G GKW
Sbjct: 202 DIAAVEIAQANATPPSSSYYSSWRYMTRRDGAPGVWTTSRAPVGPLRLRVVVTAGSGGKW 261
Query: 239 VWADREVLPRRWRAGEVYDTGVQITDIAQEGC 270
+ +D EVLP WR GEVYDTG+++TD+A C
Sbjct: 262 LRSDGEVLPADWRPGEVYDTGLRVTDVAVRSC 293
>Os03g0106900 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 8/183 (4%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTG--LVLSSXXXXXXXXXXXXXS 140
+ G GCG+C++++C + CS+ A + VTD LS
Sbjct: 87 KDGKGCGSCFEIKCSKPEACSDKPALIHVTDMNDEPIAAYHFDLSGLAFGAMAKDGKDEE 146
Query: 141 LTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGS 200
L + +D +++RV C+Y + E++ PN L + Y G D+V V++ + GS
Sbjct: 147 LRKAGIIDTQFRRVKCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGS 206
Query: 201 SSWKFMTREHGPSWSMANAPP--GPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDT 258
WK + G W + P GP +R+ GG K + D +P W+A VY +
Sbjct: 207 EEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGGE--KIIAED--AIPDGWKADSVYKS 262
Query: 259 GVQ 261
VQ
Sbjct: 263 NVQ 265
>Os03g0106500 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 8/183 (4%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTG--LVLSSXXXXXXXXXXXXXS 140
+ G GCG+C++++C + CS+ A + VTD LS
Sbjct: 87 KDGKGCGSCFEIKCSKPEACSDKPALIHVTDMNDEPIAAYHFDLSGLAFGAMAKDGKDEE 146
Query: 141 LTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGS 200
L + +D +++RV C+Y + E++ PN L + Y G D+V V++ + GS
Sbjct: 147 LRKAGIIDTQFRRVKCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGS 206
Query: 201 SSWKFMTREHGPSWSMANAPP--GPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDT 258
WK + G W + P GP +R+ GG K + D +P W+A VY +
Sbjct: 207 EEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGGE--KIIAED--AIPDGWKADSVYKS 262
Query: 259 GVQ 261
VQ
Sbjct: 263 NVQ 265
>Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10)
Length = 267
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTG--LVLSSXXXXXXXXXXXXXS 140
+ G GCG+C++V+C + CS+ + +TD LS
Sbjct: 87 KDGKGCGSCFEVKCSKPEACSDKPVIIHITDMNTEPIAAYHFDLSGHAFGAMAKEGKDEE 146
Query: 141 LTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGS 200
L + +D++++RV C+Y + E+ PN + Y GG D+V V++ + GS
Sbjct: 147 LRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGS 206
Query: 201 SSWKFMTREHGPSWSMANAPP--GPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDT 258
WK + G W + P GP +R VT D K V D V+P W+A +Y +
Sbjct: 207 EEWKPLNESWGAIWRIDTPKPLKGPFSLR--VTTESDQKLVAND--VIPDNWKANALYKS 262
Query: 259 GVQI 262
+Q+
Sbjct: 263 EIQV 266
>Os10g0555900 Beta-expansin precursor
Length = 268
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRAR--TNRTGLVLSSXXXXXXXXXXXXXS 140
+ G GCG+CYQ+RC + CS V++TD ++ LS
Sbjct: 88 KDGKGCGSCYQIRCVNHPACSGNPETVIITDMNYYPVSKYHFDLSGTAFGAMAKPGQNDQ 147
Query: 141 LTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGS 200
L +D+++KRVPC + ++ V+E S P + Y+ G D+V VD+ + S
Sbjct: 148 LRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSN-PVYFAVLVEYEDGDGDVVQVDLMEANS 206
Query: 201 SSWKFMTREHGPSWSMANAP--PGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDT 258
SW M G W + + P +R+ GK + A +V+P W VY +
Sbjct: 207 QSWTPMRESWGSIWRLDSNHRLTAPFSLRIT---NESGKQLVA-SQVIPANWAPMAVYRS 262
Query: 259 GVQIT 263
VQ +
Sbjct: 263 FVQYS 267
>Os02g0658800 Beta-expansin
Length = 292
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 15/183 (8%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRAR-----TNRTGLVLSSXXXXXXXXXXX 137
+GG GCGACY+V+C CS A VV+TD +S
Sbjct: 109 KGGKGCGACYEVKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGM 168
Query: 138 XXSLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQ 197
L + V+Y+RVPC+Y +++ RVD+ + P + ++ G D+ AVD+ +
Sbjct: 169 ADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGAN-PFYFEVLIEFEDGDGDLNAVDLME 227
Query: 198 VGSSSWKFMTREHGPSW----SMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAG 253
G W M + G W + A P +RL D V V+P W+ G
Sbjct: 228 AG-CGWTPMVQNWGALWRYNSNTGKALKAPFSLRLTS----DSGKVLVANNVIPASWKPG 282
Query: 254 EVY 256
Y
Sbjct: 283 VTY 285
>Os03g0102700 Beta-expansin precursor
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRA--RTNRTGLVLSSXXXXXXXXXXXXXS 140
+ G GCG+CYQ+RC CS V++TD + LS
Sbjct: 138 KDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVSLYHFDLSGTAFGAMAKDNRNDE 197
Query: 141 LTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGS 200
L +D++++RVPC+Y +++ V++ S P + I Y+ G D+V VD+ +
Sbjct: 198 LRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSN-PVYMAILVEYENGDGDVVQVDLMESRY 256
Query: 201 SS----------WKFMTREHGPSWSMANAPP--GPLQMRLVVTGGYDGKWVWADREVLPR 248
S+ W M G W + P GP +R+ GK + AD +V+P
Sbjct: 257 STGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQGPFSLRIT---NESGKTLIAD-QVIPA 312
Query: 249 RWRAGEVYDTGVQI 262
W+ VY + VQ
Sbjct: 313 DWQPNTVYSSIVQF 326
>Os05g0246300 Expansin/Lol pI family protein
Length = 264
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDR-----ARTNRTGLVLSSXXXXXXXXXXX 137
+ G+GCG+CYQV+C CS VV+TD + LS
Sbjct: 82 KSGLGCGSCYQVKCSGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQ 141
Query: 138 XXSLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQ 197
L + ++Y RVPC + L+ VD S P+ + Y+ G D+ +D+ Q
Sbjct: 142 ADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGSN-PSYFAVLVKYENGDGDLSGMDLMQ 200
Query: 198 VGS-SSWKFMTREHGPSW--SMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGE 254
G+ ++W M + G W S A PL +RL + GK + A V+P W+ G
Sbjct: 201 TGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSS---SGKTLVASN-VIPSGWKPGA 256
Query: 255 VYDTGVQ 261
Y + V
Sbjct: 257 SYTSTVN 263
>Os04g0552000 Expansin/Lol pI family protein
Length = 264
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDR-----ARTNRTGLVLSSXXXXXXXXXXX 137
+ G+GCG+CYQV+C CS VV+TD + LS
Sbjct: 82 KSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQ 141
Query: 138 XXSLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQ 197
L + ++Y RVPC + L+ VD S PN + Y+ G D+ V++ Q
Sbjct: 142 ADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGSN-PNYFAVLVKYENGDGDLSGVELMQ 200
Query: 198 VGS-SSWKFMTREHGPSWSM--ANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGE 254
G+ ++W M + G W + +A P +RL + GK + A V+P W+ G
Sbjct: 201 TGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSS---SGKTLVASN-VIPSGWKPGM 256
Query: 255 VYDTGVQI 262
Y + V
Sbjct: 257 SYISTVNF 264
>Os04g0552200 Beta-expansin 5
Length = 275
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDR-----ARTNRTGLVLSSXXXXXXXXXXX 137
+ G GCG+CYQ++C + CS VV+TD +S
Sbjct: 90 KNGKGCGSCYQIKCTGNRACSGRPVTVVITDSCPGGVCLNEAAHFDMSGTAFGAMANRGM 149
Query: 138 XXSLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQ 197
L + ++YKRVPC + +++ +VD S P L I Y G D+ AV + +
Sbjct: 150 GDRLRSAGVLKIQYKRVPCRF-AMNVAFKVDAGSN-PYYLAILVQYANGDGDLAAVHIME 207
Query: 198 V-GSSSWKFMTREHGPSWSMANAPPGPLQ--MRLVVTGGYDGKWVWADREVLPRRWRAGE 254
G WK M + G +W + + PL + +T G GK + A+ V+P W+AG
Sbjct: 208 ARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSG-SGKVLVAN-NVIPSGWQAGL 265
Query: 255 VYDTGVQ 261
Y + V
Sbjct: 266 TYRSTVN 272
>Os10g0548600 Beta-expansin precursor
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 8/184 (4%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTG--LVLSSXXXXXXXXXXXXXS 140
+ G GCG+CY+V+C+ CS V +TD + S
Sbjct: 89 KDGRGCGSCYEVKCEQPAACSKQPVTVFITDMNYEPISAYHFDFSGKAFGAMACPGKETE 148
Query: 141 LTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGS 200
L + +D++++RV C+Y E+ PN L + + D++ +D+ + G
Sbjct: 149 LRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGL 208
Query: 201 SSWKFMTREHGPSWSMANAPP--GPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDT 258
+W+ M G W M A P P +R+ GK + A ++V+P W +Y +
Sbjct: 209 PAWRPMKLSWGAIWRMDTATPLKAPFSIRVTTE---SGKSLIA-KDVIPVNWMPDAIYVS 264
Query: 259 GVQI 262
VQ
Sbjct: 265 NVQF 268
>Os10g0555700 Beta-expansin
Length = 261
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 85 GVGCGACYQVRCKDKKLCSNAGARVVVTDRAR--TNRTGLVLSSXXXXXXXXXXXXXSLT 142
G GCGACYQ+RC + CS V++TD R LS L
Sbjct: 79 GKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPVARYHFDLSGTAFGAMARPGLNDQLR 138
Query: 143 ELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTD--IVAVDVAQVGS 200
+D++++RVPC +R ++ V+ G N + ++ L + D +V +DV +
Sbjct: 139 HAGIIDIQFRRVPCYHRGLYVNFHVEA---GSNPVYLAVLVEFANKDGTVVQLDVMESLP 195
Query: 201 SS-----WKFMTREHGPSWSM-ANA-PPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAG 253
S W M R G W + AN GP +R+V G+ V A +V+P WRA
Sbjct: 196 SGKPTRVWTPMRRSWGSIWRLDANHRLQGPFSLRMVSE---SGQTVIA-HQVIPANWRAN 251
Query: 254 EVYDTGVQI 262
Y + VQ
Sbjct: 252 TNYGSKVQF 260
>Os03g0102500 Similar to Beta-expansin precursor (Fragment)
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 11/187 (5%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRAR--TNRTGLVLSSXXXXXXXXXXXXXS 140
+GG GCG+CY+VRC CS V +TD ++ LS
Sbjct: 94 KGGKGCGSCYRVRCNRNPACSGNAQTVAITDMNYFPLSQYHFDLSGIAFGRLAKPGRADD 153
Query: 141 LTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGS 200
L +DV++ RVPCE+ + V+E S P L + Y+ G D+ VD+ + G+
Sbjct: 154 LRRAGIIDVQFARVPCEFPGLKVGFHVEEGSS-PVYLAVLVEYENGDGDVAQVDLKEAGA 212
Query: 201 SS--WKFMTREHGPSWSMANAP--PGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVY 256
W M G W + + P +R+ G +V+P W Y
Sbjct: 213 GGGRWTPMRESWGSVWRLDSNHRLRAPFSIRIRSDSGK----TLVAPDVIPLNWTPNTFY 268
Query: 257 DTGVQIT 263
+ VQ +
Sbjct: 269 RSFVQYS 275
>Os02g0658600 Similar to Beta-expansin (Fragment)
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 19/185 (10%)
Query: 85 GVGCGACYQVRCKDKKLCSNAGARVVVTD-----RARTNRTGLVLSSXXXXXXXXXXXXX 139
G GCG+CYQV+C CS VV+TD LS
Sbjct: 85 GKGCGSCYQVKCSGNPSCSGKPVTVVLTDLCPGGACLEEPVHFDLSGTAFGAMAKPGQDD 144
Query: 140 SLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLY--QGGQTDIVAVDVAQ 197
L + V+Y RVPC+++ ++ RVD G N+ ++ L + G D+ AVD+ Q
Sbjct: 145 QLRNAGKLPVQYARVPCKWQGVDIAFRVDA---GSNQYYLAVLVEDEDGDGDLSAVDLMQ 201
Query: 198 ----VGSSSWKFMTREHGPSWSMANAPPGPLQ--MRLVVTGGYDGKWVWADREVLPRRWR 251
G SW M + G W N+ P PLQ M + +T G V ++ V+P W+
Sbjct: 202 SGGSGGGGSWAAMQQSWGAVWKY-NSGPAPLQAPMSIRLTSGSGRTLVASN--VIPAGWQ 258
Query: 252 AGEVY 256
G Y
Sbjct: 259 PGGTY 263
>Os10g0556100 beta-expansin EXPB4 [Oryza sativa (japonica cultivar-group)]
Length = 286
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 15/191 (7%)
Query: 83 RGGVGCGACYQVRCKDKKLCSNAGARVVVTDRAR--TNRTGLVLSSXXXXXXXXXXXXXS 140
+ G GCG+CY++RC + CS V++TD LS
Sbjct: 101 KDGKGCGSCYKIRCTKDQSCSGRSETVIITDMNYYPVAPFHFDLSGTAFGRLAKPGLNDK 160
Query: 141 LTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGS 200
L +D+E+ RVPCE+ + V+E S P + Y+ G D+V VD+ + +
Sbjct: 161 LRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSN-PVYFAVLVEYEDGDGDVVQVDLMESKT 219
Query: 201 SS------WKFMTREHGPSWSMANAP--PGPLQMRLVVTGGYDGKWVWADREVLPRRWRA 252
+ W M G W + P +R+ GK + A+ V+P WR
Sbjct: 220 AHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIR---NESGKTLVAN-NVIPANWRP 275
Query: 253 GEVYDTGVQIT 263
Y + VQ +
Sbjct: 276 NTFYRSFVQYS 286
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.134 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,164,188
Number of extensions: 305664
Number of successful extensions: 662
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 636
Number of HSP's successfully gapped: 18
Length of query: 279
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 179
Effective length of database: 11,814,401
Effective search space: 2114777779
Effective search space used: 2114777779
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)