BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0504900 Os02g0504900|AK065386
(385 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0504900 Cyclin-like F-box domain containing protein 799 0.0
Os04g0380300 Cyclin-like F-box domain containing protein 574 e-164
Os10g0409900 Cyclin-like F-box domain containing protein 116 3e-26
Os07g0153400 Cyclin-like F-box domain containing protein 115 6e-26
Os03g0167800 Cyclin-like F-box domain containing protein 113 2e-25
Os02g0202900 Cyclin-like F-box domain containing protein 112 4e-25
Os10g0388200 Cyclin-like F-box domain containing protein 110 2e-24
Os02g0114600 Cyclin-like F-box domain containing protein 103 2e-22
Os04g0619300 Cyclin-like F-box domain containing protein 100 3e-21
Os10g0363600 Cyclin-like F-box domain containing protein 98 1e-20
Os02g0748300 Similar to VMP3 protein 91 1e-18
Os03g0171600 Cyclin-like F-box domain containing protein 91 2e-18
Os11g0602800 Galactose oxidase, central domain containing p... 91 2e-18
Os06g0594400 Cyclin-like F-box domain containing protein 82 7e-16
Os02g0316200 Cyclin-like F-box domain containing protein 70 2e-12
Os01g0165200 STAT protein family protein 68 1e-11
Os11g0138700 Cyclin-like F-box domain containing protein 66 5e-11
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/385 (100%), Positives = 385/385 (100%)
Query: 1 MLTLVGTRDSFAQSQAQLCAGMQLKAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKIC 60
MLTLVGTRDSFAQSQAQLCAGMQLKAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKIC
Sbjct: 1 MLTLVGTRDSFAQSQAQLCAGMQLKAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKIC 60
Query: 61 LALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLG 120
LALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLG
Sbjct: 61 LALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLG 120
Query: 121 CSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVE 180
CSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVE
Sbjct: 121 CSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVE 180
Query: 181 LSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCF 240
LSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCF
Sbjct: 181 LSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCF 240
Query: 241 ACSFEGKLYVMGGRSRFTIGNTRFVDVYNPNDNSWGEVKNGCVMVTAHAVLDKKLFCIEW 300
ACSFEGKLYVMGGRSRFTIGNTRFVDVYNPNDNSWGEVKNGCVMVTAHAVLDKKLFCIEW
Sbjct: 241 ACSFEGKLYVMGGRSRFTIGNTRFVDVYNPNDNSWGEVKNGCVMVTAHAVLDKKLFCIEW 300
Query: 301 KNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYDPAA 360
KNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYDPAA
Sbjct: 301 KNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYDPAA 360
Query: 361 PTGSEWFTSELKPPGLCLCSVTIRA 385
PTGSEWFTSELKPPGLCLCSVTIRA
Sbjct: 361 PTGSEWFTSELKPPGLCLCSVTIRA 385
>Os04g0380300 Cyclin-like F-box domain containing protein
Length = 375
Score = 574 bits (1479), Expect = e-164, Method: Compositional matrix adjust.
Identities = 274/385 (71%), Positives = 316/385 (82%), Gaps = 10/385 (2%)
Query: 1 MLTLVGTRDSFAQSQAQLCAGMQLKAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKIC 60
MLTLVG R+ F ++Q L A MQLK PTR + D+Y ALIPGLPEDLAK+C
Sbjct: 1 MLTLVGAREPFVKAQTNLPATMQLKFPTRT----------QGDSYGALIPGLPEDLAKVC 50
Query: 61 LALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLG 120
LALVPRS FPVMG+VSK WMSF+ SKEFIAVRKEVG+LEE +Y L G KG +WEVLG
Sbjct: 51 LALVPRSYFPVMGAVSKSWMSFIGSKEFIAVRKEVGRLEERIYALITGDGGKGPYWEVLG 110
Query: 121 CSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVE 180
Q++ LPPMPG TKAGF VVVLDGKL V+AGY D+GKECVSDEVY+YD+ LNRW
Sbjct: 111 SLEQQNRMLPPMPGLTKAGFSVVVLDGKLLVMAGYGVDYGKECVSDEVYQYDARLNRWAA 170
Query: 181 LSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCF 240
L+KMNVAR DFACAEVNG +YVAGGFG +GD LSSVEVYD ++NKWT+IESLRRPRWG F
Sbjct: 171 LAKMNVARRDFACAEVNGAVYVAGGFGSDGDGLSSVEVYDPQRNKWTIIESLRRPRWGSF 230
Query: 241 ACSFEGKLYVMGGRSRFTIGNTRFVDVYNPNDNSWGEVKNGCVMVTAHAVLDKKLFCIEW 300
ACSF GKLY+MGGRS FTIGN+RF+DVY+P +SW E+K GCVMVT+HAV++K+LFCIEW
Sbjct: 231 ACSFNGKLYIMGGRSSFTIGNSRFIDVYDPILHSWTEIKKGCVMVTSHAVINKRLFCIEW 290
Query: 301 KNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYDPAA 360
KNQRSLA+FNP+D+SWQK+PVPLTGSS+T F G+ DGKLLLFS +EEP Y+TLMYDP A
Sbjct: 291 KNQRSLAIFNPSDSSWQKIPVPLTGSSATLFSLGVLDGKLLLFSQEEEPGYQTLMYDPTA 350
Query: 361 PTGSEWFTSELKPPGLCLCSVTIRA 385
P GSEW TS LKP GLCLCSVTI +
Sbjct: 351 PAGSEWHTSTLKPSGLCLCSVTIES 375
>Os10g0409900 Cyclin-like F-box domain containing protein
Length = 442
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 127/288 (44%), Gaps = 22/288 (7%)
Query: 41 ESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEE 100
S L+PGLP+DLA CL VPR + P + V KRW L + ++RK G EE
Sbjct: 75 RSRTQAPLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYSLRKRNGMAEE 134
Query: 101 WVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKA--GFGVVVLDGKLFVIAGYAAD 158
WVYV D K S W Q LPP+P GFG VL G + G
Sbjct: 135 WVYVFKRDREGKIS-WHAFDPLHQLWKSLPPVPAEYSEALGFGCAVLSGCYLYLFG---- 189
Query: 159 HGKECVSDEVYR---YDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPN-GDSLS 214
GK+ + + R Y++ N+W M R F +N +YVAGG +L
Sbjct: 190 -GKDPLRGSMRRVVFYNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLP 248
Query: 215 SVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGGRSRFTIGNTRFVDVYNPNDNS 274
S EVYD +N+W + + ++GK ++ G S + + +VY P+ N
Sbjct: 249 SAEVYDPNRNRWACVAEMNNGMVPFIGVVYDGKWFLKGLDSHRQVTS----EVYLPSSNL 304
Query: 275 WGEVKNGCVMVTA----HAVLDKKLFCIEWKNQRSLAVFNPADNSWQK 318
W + + MVT + KL+ + ++ L V++P +W K
Sbjct: 305 WSTIDDE--MVTGWRNPSITFNGKLYSSDCRDGCKLRVYDPNTGTWAK 350
>Os07g0153400 Cyclin-like F-box domain containing protein
Length = 406
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 137/320 (42%), Gaps = 11/320 (3%)
Query: 11 FAQSQAQLCAGMQLKAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKICLALVPRSQFP 70
SQ +L +L + S + ++ LIPGLP+D A CL +P
Sbjct: 16 LGDSQMKLTPKFRLATTSALPSSMPASDLEQASWETPLIPGLPDDAALNCLLRLPVETHE 75
Query: 71 VMGSVSKRWMSFLESK-EFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPL 129
V +RW L K F RK +G ++ L + W+VL + +
Sbjct: 76 ACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLAFHRCTGKIQWKVLDLNYLTWHTI 135
Query: 130 PPMPGPTKA---GFGVVVL--DGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVELSKM 184
P MP +A GFG V + DG L V G +D +C V +YD NRW +++M
Sbjct: 136 PAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSD--MDCPLHLVLKYDVYKNRWTVMTRM 193
Query: 185 NVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSF 244
AR FA ++G +YVAGG+ + L+S EV D + W + S+ +
Sbjct: 194 LAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLDPVKGVWQPVASMGMNMASSDSAVI 253
Query: 245 EGKLYVMGGRSRFTIGNTRFVDVYNPNDNSWGEVKNGCV--MVTAHAVLDKKLFCIEWKN 302
G+LYV G + + R VY+P + W + G V+DK LF I
Sbjct: 254 SGRLYVTEGCAWPFFSSPRG-QVYDPKIDRWEVMPVGMREGWTGLSVVIDKHLFVISEYE 312
Query: 303 QRSLAVFNPADNSWQKVPVP 322
+ + V++P +SW V P
Sbjct: 313 RMKVKVYDPETDSWDSVKGP 332
>Os03g0167800 Cyclin-like F-box domain containing protein
Length = 438
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 136/313 (43%), Gaps = 25/313 (7%)
Query: 16 AQLCAGMQLKAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSV 75
A+LC +K P + K + A L+PGLP+DLA CL VPR + + V
Sbjct: 49 AKLCMQPDIK-PNKRKSRSSHKERCRTQA--PLLPGLPDDLAITCLMRVPRLEHTNLRLV 105
Query: 76 SKRWMSFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPG- 134
KRW L + ++RK++G EEWV+V D K S W Q LPP+P
Sbjct: 106 CKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKIS-WHAFDPVHQVWKSLPPVPAE 164
Query: 135 -PTKAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYR---YDSCLNRWVELSKMNVARCD 190
GFG VL G + G GK+ V + R Y++ +N+W+ M R
Sbjct: 165 YSEAVGFGCAVLSGCYLYLFG-----GKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHC 219
Query: 191 FACAEVNGMIYVAGGFGPN-GDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLY 249
F +N +YVAGG +L S E YD +N+W+ I + ++GK +
Sbjct: 220 FGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWF 279
Query: 250 VMGGRSRFTIGNTRFVDVYNPNDNSWGEVKNGCVMVTA----HAVLDKKLFCIEWKNQRS 305
+ G S + +VY P N W + MVT + +L+ E ++
Sbjct: 280 LKGLDSHRQV----VSEVYMPTSNVWSVTADE--MVTGWRNPSICFNGRLYSAECRDGCK 333
Query: 306 LAVFNPADNSWQK 318
L V++ SW +
Sbjct: 334 LRVYDRDTRSWTR 346
>Os02g0202900 Cyclin-like F-box domain containing protein
Length = 436
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 127/285 (44%), Gaps = 24/285 (8%)
Query: 46 CALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVL 105
C LIPGLP+DLA CL VPR + V +RW L F +R+ +G E+WVY +
Sbjct: 74 CPLIPGLPDDLAVACLIRVPRGDHWKLRLVCRRWSRLLAGNYFYGLRRRLGLAEQWVYAV 133
Query: 106 TADAGSKGSHWEVLGCSGQKHSPLPPMPG--PTKAGFGVVVLDG-KLFVIAGYAADHGKE 162
D + S W+VL + LPP+PG AGFG VL G L+++ G G
Sbjct: 134 KRDGEGRVS-WDVLDPARLAWRALPPVPGEYAGAAGFGCAVLGGCHLYLLGGSDPRRGP- 191
Query: 163 CVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVA-----GGFGPNGDSLSSVE 217
V Y + NRW M R F C + +YVA G G G L SVE
Sbjct: 192 --MRRVVFYSARSNRWHRAPDMLRRRHGFGCCVMGNRLYVAGGEGCGVGGGGGGGLRSVE 249
Query: 218 VYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGGRSRFTIGNTRFV--DVYNPNDNSW 275
V+D +N+W+ + + + G+ YV G +G R V VY+P ++W
Sbjct: 250 VFDPAKNRWSFVSDMAASLMPFVSAVHGGRWYVKG------LGAQRQVMSQVYSPEADAW 303
Query: 276 GEVKNGCVMVTA----HAVLDKKLFCIEWKNQRSLAVFNPADNSW 316
MVT A L +L+ + K+ L ++ A +W
Sbjct: 304 SAAHELDAMVTGWRSPSASLGGRLYAADCKDGCRLRAYDEAAGAW 348
>Os10g0388200 Cyclin-like F-box domain containing protein
Length = 347
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 47 ALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLT 106
LI GLP ++A CLA VP PV+ V W + + + E VR ++ E+ + VL
Sbjct: 4 TLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL- 62
Query: 107 ADAGSKGSHWEVLGCSGQKHSPLPPMPGPTK--AGFGVVVLDGKLFVIAG-------YAA 157
A + W++ K LP MP + A FGV + GKL+VI G
Sbjct: 63 --AFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG 120
Query: 158 DHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVE 217
DH + S+EV+ YD WV+ + M VAR FAC ++G I VAGGF S+S E
Sbjct: 121 DHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAE 180
Query: 218 VYDAEQNKWTLIESLRRPR-WGCFACSFEGKLYVM 251
+Y+ E + W + LR+ C +GK++V+
Sbjct: 181 IYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVL 215
>Os02g0114600 Cyclin-like F-box domain containing protein
Length = 360
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 23/282 (8%)
Query: 45 YCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYV 104
+ +LI GLP+++A +CLA VPR + VSKRW + L S+E+ + RK E WVYV
Sbjct: 22 HTSLIHGLPDEIAILCLARVPRRYHNALRCVSKRWRALLSSEEWHSCRKRNNLDEPWVYV 81
Query: 105 LTADAGSKGSHWEVLGCSGQKHSPLPPM-----PGPTKAGFGVVVLDGKLFVIAG--YAA 157
+ G K VL S L M P ++ G + LD +LF++ G +
Sbjct: 82 ICRSTGIKCY---VLAPDPTTRS-LKIMQVIEPPCSSREGISIETLDKRLFLLGGCSWLK 137
Query: 158 DHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVE 217
D +DEV+ YD+ N W ++ M ARC F A ++ +Y+ GG G S +S +
Sbjct: 138 D-----ANDEVFCYDASSNCWSSVAPMPTARCYFVSAALDKKLYITGGLGLTDKSPNSWD 192
Query: 218 VYDAEQNKWTLIES-LRRPRWGCFACSFEGKLYVMGGRSRFTIGNTRFVDVYNPNDNSWG 276
+YD N W + ++ + P F + +G+L + + F +Y+P +W
Sbjct: 193 IYDPVTNSWCVHKNPMLTPDIVKFV-ALDGELVTV---HKAAWNRMYFAGIYDPLCRTWR 248
Query: 277 EVKNGCVMV--TAHAVLDKKLFCIEWKNQRSLAVFNPADNSW 316
+N + + V+D L+ +E L ++ W
Sbjct: 249 GTENEIALCWSGSTVVMDGTLYMLEQSLGTKLMMWQKETKEW 290
>Os04g0619300 Cyclin-like F-box domain containing protein
Length = 455
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 31/321 (9%)
Query: 22 MQLKAPTRAKYSQGFMPI-GESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWM 80
++L+ P S+G G +D + PGL +DLA+ CLA RS +P + ++K++
Sbjct: 89 LKLQKPVVKTQSKGDSSASGSNDCF---FPGLHDDLAQDCLAWASRSDYPSLSCLNKKFN 145
Query: 81 SFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAGF 140
+ S +R++ G +E WVY+ + WE S ++ LP MP F
Sbjct: 146 LLINSGYLYRLRRKYGIVEHWVYLACSLM-----PWEAFDPSRKRWMRLPRMP--CDECF 198
Query: 141 GVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMI 200
D + + G+E ++ Y+ W + MN+ RC FA +
Sbjct: 199 SCA--DKESLAVGTQLLVFGREYTGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIA 256
Query: 201 YVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGG----RSR 256
VAGG NG L S E+Y++E W + + PR +GK YV+GG R
Sbjct: 257 IVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDS 316
Query: 257 FTIGNTRFVDVYNPNDNSWGEVKNGCVMVTAH-------AVLDKKLFCIEWKNQRSLAVF 309
T G + YN +W + + T+ AV++ +L+ + + + +
Sbjct: 317 LTCG-----EEYNLETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAAD-QATNVVKKY 370
Query: 310 NPADNSWQKV-PVPLTGSSST 329
+ +N+W V P+P+ SS
Sbjct: 371 DKGNNTWNIVKPLPVRADSSN 391
>Os10g0363600 Cyclin-like F-box domain containing protein
Length = 475
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 165/431 (38%), Gaps = 97/431 (22%)
Query: 25 KAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLE 84
KA + K P+ + LIPGLP++++ LA +PR + VS+ W + +
Sbjct: 22 KADSSKKLRMSAPPLSGGYDHPGLIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAIT 81
Query: 85 SKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAG----- 139
E VRKE+G EEW+Y+LT K W + LP MPG + G
Sbjct: 82 GVELYRVRKELGVSEEWLYMLTKSDDGK-LVWNAFDPVCGQWQRLPLMPGISHGGECKRG 140
Query: 140 -----------FGVVVLD--------------------------GKLFVIAGYAADHGKE 162
G+ V D G ++V+ G++ +
Sbjct: 141 IPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAIGTVNGCIYVLGGFSRGSAMK 200
Query: 163 CVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGF--GPNGDS-LSSVEVY 219
C V+RYD +N W E+S M+ R + +N +YV GG G NG + L S EV+
Sbjct: 201 C----VWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVF 256
Query: 220 DAEQNKWT----------------LIESLRRPRWGCFACSFEGKLYVMGGRSRFTIGNTR 263
D W + L +P SF GKLYV +
Sbjct: 257 DPRTGIWVEVPDIPFSKAQALPTAFLAELLKPI-ATGMTSFGGKLYVPQSLYSWPF---- 311
Query: 264 FVDV----YNPNDNSWGEVKNGC--------VMVTAHAVLDKKLFCIE---WKNQRSLAV 308
FVDV ++P NSW E+ G AV+D L+ +E ++ + +
Sbjct: 312 FVDVGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYALEPSTSSDRGKIKI 371
Query: 309 FNPADNSWQ----KVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYDPAAPTGS 364
++P +++W+ +VPV S + GKL L D + + D P
Sbjct: 372 YDPQEDAWKVAIGQVPVGDFAESECPYLLAGFLGKLNLIIKDVDSKINIMQTDVLKPV-- 429
Query: 365 EWFTSELKPPG 375
EL PG
Sbjct: 430 -----ELSAPG 435
>Os02g0748300 Similar to VMP3 protein
Length = 426
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 120/296 (40%), Gaps = 25/296 (8%)
Query: 34 QGFMPIGESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRK 93
QG G SD+ LI + D + CLA RS + + SV++ + S + S E R+
Sbjct: 74 QGSNDQGFSDS-STLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERR 132
Query: 94 EVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIA 153
++G E WVY WE + LP MP + D + +
Sbjct: 133 QLGIAEHWVYF-----SCNVQEWEAYDPYRSRWMTLPKMPHNE----CFMCSDKESLAVG 183
Query: 154 GYAADHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSL 213
GKE +S V Y N W MN RC F A VAGG G L
Sbjct: 184 TELLVFGKEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVL 243
Query: 214 SSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGGRSRFTIGNTRFV---DVYNP 270
S E+Y++E +W + + + R C GK YV+GG + NT + + Y+
Sbjct: 244 RSAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMA----SNTEVLTCGEEYDL 299
Query: 271 NDNSWGEVKNGCVMVTAH-------AVLDKKLFCIEWKNQRSLAVFNPADNSWQKV 319
+W ++N + AV++ +L+ ++ + + +N DN+W +
Sbjct: 300 EKGTWRVIENMSEGLNGASGAPPLVAVVENELYAAQYAG-KLVRKYNIKDNTWTTL 354
>Os03g0171600 Cyclin-like F-box domain containing protein
Length = 431
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 35/284 (12%)
Query: 47 ALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLT 106
+LI + DL CL + RS + + S++K + S + + E +R++ G E WVY
Sbjct: 94 SLIGAIGRDLTINCLLRLSRSDYGSVASLNKDFRSLVRNGEIYRLRRQSGVAEHWVYF-- 151
Query: 107 ADAGSKGSHWEVLGCSGQKHSPLPPMPGPTK----AGFGVVVLDGKLFVIAGYAADHGKE 162
W+ ++ +P MP P + + + + +L V A
Sbjct: 152 ---SCNVLEWDAYDPYRERWIQVPKMP-PDECFMCSDKESLAVGTELLVFA--------- 198
Query: 163 CVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAE 222
++ V+RY N W M RC F V YVAGG +G LSS E+YD+E
Sbjct: 199 -MAHIVFRYSILTNSWTRADPMISPRCLFGSTSVGAKAYVAGGTDSSGRILSSAEMYDSE 257
Query: 223 QNKWTLIESLRRPRWGCFACSFEGKLYVMGGRSRFTIGNTRFV---DVYNPNDNSWGEVK 279
+ WT + S+ R R C +GK YV+GG N + + + Y+ SW ++
Sbjct: 258 THSWTPLPSMNRARKMCSGVFMDGKFYVVGG----VASNNKVLTCGEEYDLKRRSWRVIE 313
Query: 280 N---GCVMVTAH----AVLDKKLFCIEWKNQRSLAVFNPADNSW 316
N G VT AV++ +L+ ++ +++ + ++ +N W
Sbjct: 314 NMSEGLNGVTGAPPLIAVVNNELYAADY-SEKDVKKYDKQNNKW 356
>Os11g0602800 Galactose oxidase, central domain containing protein
Length = 432
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 48 LIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTA 107
LI + +LA CL PRS + ++ +++ + S + S + +R+E +E +Y
Sbjct: 93 LIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIY---- 148
Query: 108 DAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAADHGKECVSDE 167
W+ Q+ +P MP P + + D + + GK+ +
Sbjct: 149 -CSCNVLEWDGFDPCRQRWFNIPSMP-PIEC---FTLADKESLAVGTNILVFGKKVEAHV 203
Query: 168 VYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAEQNKWT 227
V RY N W MN RC F A VAGG G NG +LSS E+YD+E WT
Sbjct: 204 VLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGDNG-TLSSAELYDSEAKTWT 262
Query: 228 LIESLRRPRWGCFACSFEGKLYVMGGRS 255
+ S+ R R C +GK YV+GG++
Sbjct: 263 TLPSMNRARKMCSGFFMDGKFYVIGGKA 290
>Os06g0594400 Cyclin-like F-box domain containing protein
Length = 381
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 141/342 (41%), Gaps = 45/342 (13%)
Query: 45 YCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYV 104
Y LIPGLPE++A+ CL V Q P + +S++W + +ES + +RK G + +
Sbjct: 3 YNELIPGLPEEVARECLIRVGFDQLPAVRRISRQWKAEVESPAYNRLRKAEGLARPALAL 62
Query: 105 LTAD----------------AGSKGSHWE--VLGCSGQKHSPLPPMPGPTKA---GFGVV 143
+ A G G+ + +L + + +PLP + G + + V
Sbjct: 63 VQARRELAEAGPAADKQSSAGGVPGNSYRMVLLDPAEGRWTPLPEVGGASGSLPLFCQVA 122
Query: 144 VLDG------KLFVIAGYAADHGKECVSDEVYRYDSCLNRWVELSKM-NVARCDFACAEV 196
+DG +L V+ G+ D +D V YD W + M R FACA V
Sbjct: 123 AVDGGVEGRKRLVVVGGW--DPETWAPTDSVLVYDFLTGAWRRGAAMPGPRRSFFACAAV 180
Query: 197 NGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGGRSR 256
G ++VAGG ++L S YD + + W + + R +GK V+GG
Sbjct: 181 GGKVFVAGGHDEEKNALRSALAYDPDADAWAALPDMAEERDEPRGLCVDGKFLVVGGYP- 239
Query: 257 FTIGNTRFV---DVYNPNDNSWGEVKNGCV--------MVTAHAVLDKKLFCIEWKNQRS 305
T RFV + ++P ++W V+ G V A D+ +
Sbjct: 240 -TPAQGRFVGSAEWFDPATSTWSAVQEGFVDDGACPRTCSAAPEAGDRMYMLRDGHLVAR 298
Query: 306 LAVFNPADNSWQKV-PVPLTGSSSTRFCFGIHDGKLLLFSLD 346
+ A +W+ V PVP ++ I DG++++ D
Sbjct: 299 HGAISSAPAAWRPVAPVPEDARTAAAVSV-IPDGRVVVIGSD 339
>Os02g0316200 Cyclin-like F-box domain containing protein
Length = 424
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 105/249 (42%), Gaps = 26/249 (10%)
Query: 46 CALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVL 105
++IPGLP+D+A + L L+ + + S+ W L + + +R+ + + L
Sbjct: 26 ASIIPGLPDDVAAVILCLLTFPDQSRLRATSRAWRLLLSAATLLPLRRSLRLPRRHLLCL 85
Query: 106 TADAGSKGSHWEVLGCSGQKHSPLPPMPGPTK----AGFGVVVLDGKLFVIAGYAADH-- 159
S S + + LPP+P + A F V + G+++V+ G D
Sbjct: 86 FPTDPSLASPILLDPAAPTAWWSLPPIPCSPQHYGLANFAAVAVGGQIYVLGGSRFDARS 145
Query: 160 ---GKECVSDEVYRYDSCL--NRWVELSKMNVARCDFACAEV-NGMIYVAGG------FG 207
S YR D L +RW L M V R FACA +G + VAGG F
Sbjct: 146 YPLDNPSPSAAAYRLDLALSRHRWERLPDMRVPRGSFACAPAPSGGVIVAGGGSRHPTFP 205
Query: 208 PNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSFEG-------KLYVMGGRSRF-TI 259
G S VE+YDA W + ++ R R GC G + +VMGG + T+
Sbjct: 206 SYGSRTSGVELYDAAARAWRVTAAMPRDRAGCVGFVAHGAGDGREDEFWVMGGYDGYTTV 265
Query: 260 GNTRFVDVY 268
G DVY
Sbjct: 266 GGVVPSDVY 274
>Os01g0165200 STAT protein family protein
Length = 700
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 137 KAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEV 196
K L+GK+F I G G + S EV +D + +W+ M RC A AE+
Sbjct: 503 KGHLAGATLNGKIFAIGG---GDGSQSFS-EVEMFDPAVGKWIYSLSMQQPRCAPAAAEL 558
Query: 197 NGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGGRSR 256
NG++YV GG+ N L S E YD + WT + +R R L+ +GG +R
Sbjct: 559 NGVLYVIGGYDGNM-YLQSAERYDPREGFWTQLPRMRTRRGSHSVVVLGDSLHALGGLNR 617
Query: 257 FTIGNTRF--VDVYNPNDNSW 275
NT F V++++ NSW
Sbjct: 618 ----NTTFSSVEIFDTRANSW 634
>Os11g0138700 Cyclin-like F-box domain containing protein
Length = 415
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 86/220 (39%), Gaps = 42/220 (19%)
Query: 52 LPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTADAGS 111
LP+DL CLA VPR+ P + +VS+R+ + L S F+ +R+ L + L+
Sbjct: 53 LPDDLLLECLARVPRASLPPLPAVSRRFATLLASDAFLHLRRAHAHLRPSLLALSVSDN- 111
Query: 112 KGSHWEVLGCSGQK----HSPLPPMP--------------GPTKAGFGVVVLDGKLFVIA 153
GC Q S +P + G A VVL +F+I
Sbjct: 112 --------GCVPQALLRFESSVPVLEVAPLPLPPTLLHCGGSVFAHARAVVLGRDVFLIG 163
Query: 154 GYAADHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSL 213
A R D+ + R FA A V IYVAGG
Sbjct: 164 RGA-----------TLRVDALTGAARACAPTLFPRKKFAAAAVGDRIYVAGGSA----RT 208
Query: 214 SSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGG 253
++VE YD E + W ++ R R+GC S G YV GG
Sbjct: 209 AAVEEYDPEVDAWRVVGEAPRRRYGCAGASAGGVFYVAGG 248
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,382,696
Number of extensions: 701056
Number of successful extensions: 1688
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 1635
Number of HSP's successfully gapped: 19
Length of query: 385
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 282
Effective length of database: 11,657,759
Effective search space: 3287488038
Effective search space used: 3287488038
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)