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Os03g0167800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0114) R2 : 0.00709
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0432 (0.0239) R2dN8 : 0.00915 R2N8 : 0.00709
σ : 0.214
deviance : 21.02
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.29 0.171 10.1 0.0817 0.23 0.326 0.115 0.149 -0.00398 8.77 1014 8441 -- --
13.31 0.17 10.1 0.0521 0.231 0.301 0.128 -- -0.0104 8.76 1014 8696 -- --
13.33 0.17 10.1 0.0846 0.23 0.326 -- 0.149 -0.00406 8.76 1014 8457 -- --
13.35 0.17 10.1 0.0675 0.231 0.288 -- -- -0.0104 8.75 1014 8726 -- --
16.31 0.188 10.1 0.0737 -- 0.306 -- 0.094 -0.00856 -- 1014 8260 -- --
17.16 0.194 10.1 0.17 0.232 -- 0.102 -- 0.0605 8.72 -- -- -- --
17.19 0.194 10.1 0.173 0.231 -- -- -- 0.0605 8.71 -- -- -- --
16.28 0.188 10.1 0.059 -- 0.313 -- -- -0.00818 -- 1014 6861 -- --
13.44 0.171 10.1 -- 0.224 0.307 -- -- -0.0181 8.72 1014 8261 -- --
20.22 0.21 10.1 0.174 -- -- -- -- 0.0624 -- -- -- -- --
17.98 0.198 10.1 -- 0.232 -- -- -- 0.0412 8.66 -- -- -- --
16.32 0.188 10.1 -- -- 0.326 -- -- -0.0182 -- 1015 6869 -- --
21.02 0.214 10.1 -- -- -- -- -- 0.0432 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.07 wind 1.0 14400 < th dose dependent rect. 7 4
12 13.27 wind 1.0 14400 < th dose independent rect. 6 7
13 13.28 wind 1.0 14400 > th dose independent rect. 6 6
16 13.29 wind 1.0 14400 > th dose independent rect. 7 4
17 13.29 wind 1.0 14400 < th dose independent rect. 7 4
26 13.35 wind 3.0 14400 > th dose independent rect. 6 1
30 13.36 temperature 20.0 4320 < th dose dependent rect. 1 14
35 13.37 wind 3.0 14400 < th dose independent rect. 5 2
36 13.37 humidity 90.0 14400 < th dose dependent rect. 3 1
70 13.40 temperature 20.0 4320 < th dose dependent sin 3 NA
84 13.41 wind 1.0 14400 > th dose independent rect. 8 1
89 13.41 temperature 20.0 4320 < th dose dependent rect. 3 8
101 13.42 temperature 20.0 4320 < th dose dependent rect. 4 3
103 13.42 temperature 20.0 4320 < th dose dependent rect. 4 6
134 13.44 temperature 20.0 4320 < th dose dependent rect. 9 22
147 13.45 wind 1.0 14400 < th dose dependent rect. 6 17
149 13.45 temperature 20.0 4320 < th dose dependent rect. 12 19
175 13.47 wind 1.0 43200 < th dose dependent rect. 12 1
196 13.48 precipitation 0.1 14400 > th dose independent rect. 7 1
198 13.48 temperature 20.0 4320 < th dose dependent no NA NA
201 13.48 precipitation 0.1 14400 > th dose dependent rect. 7 1
219 13.48 temperature 20.0 4320 < th dose dependent rect. 18 21
233 13.48 temperature 20.0 4320 < th dose dependent rect. 15 23
276 13.50 wind 1.0 14400 < th dose dependent rect. 6 14
283 13.50 temperature 20.0 4320 < th dose dependent rect. 17 17
296 13.50 temperature 20.0 4320 < th dose dependent rect. 4 23
298 13.51 humidity 60.0 43200 < th dose independent rect. 23 11
330 13.52 precipitation 0.1 14400 < th dose independent rect. 7 1
333 13.52 precipitation 0.1 14400 < th dose dependent rect. 7 1
334 13.52 wind 1.0 14400 > th dose dependent rect. 5 2
357 13.52 wind 1.0 14400 < th dose dependent rect. 6 21
363 13.53 wind 1.0 14400 < th dose dependent sin 2 NA
365 13.53 temperature 20.0 4320 < th dose dependent rect. 1 1
410 13.55 wind 1.0 14400 < th dose dependent rect. 16 21
458 13.58 wind 1.0 14400 < th dose dependent rect. 18 19
495 13.61 wind 1.0 14400 > th dose independent rect. 4 12
524 13.62 atmosphere 1015.0 4320 > th dose dependent rect. 11 16
527 13.62 wind 3.0 14400 < th dose dependent rect. 22 18
553 13.64 wind 1.0 14400 > th dose independent sin 2 NA
559 13.64 atmosphere 1015.0 4320 > th dose dependent sin 17 NA
572 13.64 atmosphere 1015.0 4320 > th dose dependent rect. 11 14
585 13.64 humidity 50.0 14400 < th dose dependent rect. 16 22
592 13.65 wind 3.0 14400 < th dose independent rect. 3 11
600 13.65 humidity 50.0 14400 < th dose dependent rect. 10 4
601 13.65 precipitation 0.1 14400 > th dose dependent rect. 5 5
606 13.65 wind 1.0 14400 < th dose dependent rect. 24 13
620 13.66 precipitation 0.1 14400 > th dose independent rect. 5 5
628 13.66 humidity 50.0 14400 < th dose dependent rect. 8 5
682 13.67 humidity 60.0 43200 > th dose independent rect. 24 10
684 13.67 wind 1.0 14400 < th dose independent rect. 4 13
716 13.68 wind 1.0 14400 < th dose independent sin 2 NA
719 13.68 precipitation 0.1 14400 < th dose independent rect. 4 6
727 13.68 humidity 50.0 14400 < th dose dependent rect. 13 1
728 13.68 humidity 90.0 43200 < th dose dependent rect. 5 2
732 13.68 precipitation 0.1 14400 < th dose dependent rect. 4 6
747 13.68 wind 1.0 14400 < th dose dependent rect. 1 22
749 13.69 wind 3.0 14400 < th dose independent sin 5 NA
758 13.69 wind 1.0 14400 > th dose independent rect. 21 16
763 13.69 atmosphere 1015.0 4320 > th dose dependent rect. 12 11
802 13.70 atmosphere 1015.0 4320 > th dose dependent rect. 16 13
833 13.71 atmosphere 1015.0 4320 < th dose independent rect. 12 15
834 13.71 wind 1.0 14400 < th dose independent rect. 21 16
835 13.71 wind 1.0 14400 < th dose independent rect. 6 17
836 13.71 wind 1.0 14400 < th dose independent rect. 19 18
837 13.71 humidity 50.0 14400 < th dose dependent sin 6 NA
845 13.71 atmosphere 1015.0 4320 > th dose dependent rect. 23 4
884 13.72 humidity 50.0 14400 < th dose dependent sin 4 NA
894 13.72 atmosphere 1015.0 4320 > th dose dependent rect. 19 8
921 13.72 humidity 50.0 14400 < th dose dependent rect. 11 22
929 13.73 atmosphere 1015.0 4320 < th dose independent rect. 13 12
931 13.73 atmosphere 1015.0 4320 > th dose independent rect. 12 13
943 13.73 humidity 50.0 14400 < th dose dependent sin 2 NA
945 13.73 humidity 50.0 43200 > th dose dependent rect. 5 1
988 13.74 atmosphere 1015.0 4320 < th dose independent rect. 16 5
990 13.74 precipitation 0.1 14400 < th dose independent rect. 4 9