BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0167800 Os03g0167800|AK121310
(438 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0167800 Cyclin-like F-box domain containing protein 854 0.0
Os10g0409900 Cyclin-like F-box domain containing protein 716 0.0
Os02g0202900 Cyclin-like F-box domain containing protein 422 e-118
Os10g0363600 Cyclin-like F-box domain containing protein 117 2e-26
Os02g0574900 Cyclin-like F-box domain containing protein 117 2e-26
Os02g0114600 Cyclin-like F-box domain containing protein 115 8e-26
Os07g0153400 Cyclin-like F-box domain containing protein 114 1e-25
Os02g0504900 Cyclin-like F-box domain containing protein 96 6e-20
Os03g0171600 Cyclin-like F-box domain containing protein 94 2e-19
Os10g0388200 Cyclin-like F-box domain containing protein 89 8e-18
Os04g0380300 Cyclin-like F-box domain containing protein 87 2e-17
Os02g0748300 Similar to VMP3 protein 84 2e-16
Os04g0619300 Cyclin-like F-box domain containing protein 82 6e-16
Os11g0602800 Galactose oxidase, central domain containing p... 79 6e-15
>Os03g0167800 Cyclin-like F-box domain containing protein
Length = 438
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/438 (94%), Positives = 415/438 (94%)
Query: 1 MDXXXXXXXXXXXXXIRVRVPLVESVSCYCRVDGGLKTVVSARKFVPGAKLCMQPDIKPN 60
MD IRVRVPLVESVSCYCRVDGGLKTVVSARKFVPGAKLCMQPDIKPN
Sbjct: 1 MDAAAGGAPPRPAAGIRVRVPLVESVSCYCRVDGGLKTVVSARKFVPGAKLCMQPDIKPN 60
Query: 61 KRKSRSSHKERCRTQAXXXXXXXXXXAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYS 120
KRKSRSSHKERCRTQA AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYS
Sbjct: 61 KRKSRSSHKERCRTQAPLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYS 120
Query: 121 LRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCY 180
LRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCY
Sbjct: 121 LRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCY 180
Query: 181 LYLFGGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQ 240
LYLFGGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQ
Sbjct: 181 LYLFGGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQ 240
Query: 241 RTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWFLKGLDSHRQVVSEVYMPTSNV 300
RTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWFLKGLDSHRQVVSEVYMPTSNV
Sbjct: 241 RTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWFLKGLDSHRQVVSEVYMPTSNV 300
Query: 301 WSVTADEMVTGWRNPSICFNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHLGNSRAF 360
WSVTADEMVTGWRNPSICFNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHLGNSRAF
Sbjct: 301 WSVTADEMVTGWRNPSICFNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHLGNSRAF 360
Query: 361 EAAALVSLNGKICIIRNNMSITLVDVSNTPTVIEINNAHMWDVFARKGQHRSFIANLWFT 420
EAAALVSLNGKICIIRNNMSITLVDVSNTPTVIEINNAHMWDVFARKGQHRSFIANLWFT
Sbjct: 361 EAAALVSLNGKICIIRNNMSITLVDVSNTPTVIEINNAHMWDVFARKGQHRSFIANLWFT 420
Query: 421 IAGRNFKTHIIHCQVLQV 438
IAGRNFKTHIIHCQVLQV
Sbjct: 421 IAGRNFKTHIIHCQVLQV 438
>Os10g0409900 Cyclin-like F-box domain containing protein
Length = 442
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/423 (79%), Positives = 375/423 (88%)
Query: 16 IRVRVPLVESVSCYCRVDGGLKTVVSARKFVPGAKLCMQPDIKPNKRKSRSSHKERCRTQ 75
+RVR PLVESVSCYCR+D GLKTVV ARKFVPGAK+CMQPD+KPNK KSR S KER RTQ
Sbjct: 20 VRVRAPLVESVSCYCRLDTGLKTVVDARKFVPGAKMCMQPDVKPNKCKSRGSRKERSRTQ 79
Query: 76 AXXXXXXXXXXAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVF 135
A AI CL+RVPR+EH NLR+VCKRWNRLLSGNYYYSLRK+ GMAEEWV+VF
Sbjct: 80 APLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYSLRKRNGMAEEWVYVF 139
Query: 136 KRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFGGKDPVRGSMR 195
KRDR+ KISWHAFDP+HQ+WKSLPPVPAEYSEA+GFGCAVLSGCYLYLFGGKDP+RGSMR
Sbjct: 140 KRDREGKISWHAFDPLHQLWKSLPPVPAEYSEALGFGCAVLSGCYLYLFGGKDPLRGSMR 199
Query: 196 RVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNR 255
RVVFYNAR NKW RAPDML+KRH FGSCVINN LYVAGGECEGIQRTL SAE YDPNRNR
Sbjct: 200 RVVFYNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLPSAEVYDPNRNR 259
Query: 256 WSYISEMSTGMVPFIGVVYDGKWFLKGLDSHRQVVSEVYMPTSNVWSVTADEMVTGWRNP 315
W+ ++EM+ GMVPFIGVVYDGKWFLKGLDSHRQV SEVY+P+SN+WS DEMVTGWRNP
Sbjct: 260 WACVAEMNNGMVPFIGVVYDGKWFLKGLDSHRQVTSEVYLPSSNLWSTIDDEMVTGWRNP 319
Query: 316 SICFNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHLGNSRAFEAAALVSLNGKICII 375
SI FNG+LYS++CRDGCKLRVYD +T +W +FMDS+ HLG+SRAFEAAALV+LNGK+CI+
Sbjct: 320 SITFNGKLYSSDCRDGCKLRVYDPNTGTWAKFMDSKHHLGSSRAFEAAALVTLNGKLCIV 379
Query: 376 RNNMSITLVDVSNTPTVIEINNAHMWDVFARKGQHRSFIANLWFTIAGRNFKTHIIHCQV 435
RNNMSITLVD+S+ IE ++A MW+ ARKGQHRSF+ANLW TIAGRN K+HIIHCQV
Sbjct: 380 RNNMSITLVDISDPTMSIETDSARMWETVARKGQHRSFVANLWSTIAGRNLKSHIIHCQV 439
Query: 436 LQV 438
LQV
Sbjct: 440 LQV 442
>Os02g0202900 Cyclin-like F-box domain containing protein
Length = 436
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/442 (46%), Positives = 286/442 (64%), Gaps = 29/442 (6%)
Query: 17 RVRVPLVESVSCYCRVDGGLKTVVSARKFVPGAKLCMQPDIK----PNKRKSRSSHKERC 72
R + P V+S +C CRV+ + +AR +P AK C QP ++ P K K R
Sbjct: 4 RNQAPPVDSSACLCRVERSVAGAAAAR-LMPRAKACAQPSLRASIHPLKPKRSPGRDHRG 62
Query: 73 RT--------QAXXXXXXXXXXAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKK 124
Q A+ CL+RVPR +H LRLVC+RW+RLL+GNY+Y LR++
Sbjct: 63 GGGAGGGGGRQCPLIPGLPDDLAVACLIRVPRGDHWKLRLVCRRWSRLLAGNYFYGLRRR 122
Query: 125 LGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLF 184
LG+AE+WV+ KRD + ++SW DP W++LPPVP EY+ A GFGCAVL GC+LYL
Sbjct: 123 LGLAEQWVYAVKRDGEGRVSWDVLDPARLAWRALPPVPGEYAGAAGFGCAVLGGCHLYLL 182
Query: 185 GGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVA----GGECEGIQ 240
GG DP RG MRRVVFY+AR N+W RAPDML++RH FG CV+ NRLYVA G G
Sbjct: 183 GGSDPRRGPMRRVVFYSARSNRWHRAPDMLRRRHGFGCCVMGNRLYVAGGEGCGVGGGGG 242
Query: 241 RTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWFLKGLDSHRQVVSEVYMPTSNV 300
LRS E +DP +NRWS++S+M+ ++PF+ V+ G+W++KGL + RQV+S+VY P ++
Sbjct: 243 GGLRSVEVFDPAKNRWSFVSDMAASLMPFVSAVHGGRWYVKGLGAQRQVMSQVYSPEADA 302
Query: 301 WSVT--ADEMVTGWRNPSICFNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHLGNSR 358
WS D MVTGWR+PS GRLY+A+C+DGC+LR YD +W+ +D +H G+S
Sbjct: 303 WSAAHELDAMVTGWRSPSASLGGRLYAADCKDGCRLRAYDEAAGAWSGRVDGGQHAGSSH 362
Query: 359 AFEAAALVSLNGKICIIRNNMSITLVDVSNTPTVIEINNAHMWDVFARKGQHRSFIANLW 418
A EAAA+V+L+GK+C++RN+MS+++VDV+ + W+ KGQ ++F+ANL
Sbjct: 363 AVEAAAMVALHGKLCVVRNDMSVSVVDVAAA--------SPRWETVVGKGQMKAFVANLL 414
Query: 419 FTIAG--RNFKTHIIHCQVLQV 438
IAG K ++HCQVL+
Sbjct: 415 SAIAGGRGRAKNRVLHCQVLEA 436
>Os10g0363600 Cyclin-like F-box domain containing protein
Length = 475
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 182/430 (42%), Gaps = 86/430 (20%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWH 146
++ L R+PR+ + N ++V + W ++G Y +RK+LG++EEW+++ + D K+ W+
Sbjct: 54 SLQILARMPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTKSDDGKLVWN 113
Query: 147 AFDPVHQVWKSLPPVPA-------------------------------------EYSEAV 169
AFDPV W+ LP +P + + +
Sbjct: 114 AFDPVCGQWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRL 173
Query: 170 GF-GCAV--LSGCYLYLFGGKDPVRGSMRRVVF-YNARINKWLRAPDMLQKRHCFGSCVI 225
F GCA+ ++GC +Y+ GG RGS + V+ Y+ +N W M R + ++
Sbjct: 174 PFCGCAIGTVNGC-IYVLGGFS--RGSAMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLL 230
Query: 226 NNRLYVAGGECEGIQ--RTLRSAEFYDPNRNRW----------------SYISEM----S 263
NN+LYV GG +G L+SAE +DP W ++++E+ +
Sbjct: 231 NNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALPTAFLAELLKPIA 290
Query: 264 TGMVPFIGVVYDGKWFLKGLDSHRQVVSEVYMPTSNVWSVTADEMVTGW------RNPSI 317
TGM F G +Y + L V E++ P +N W+ M GW S
Sbjct: 291 TGMTSFGGKLYVPQ-SLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSA 349
Query: 318 CFNGRLYSAE---CRDGCKLRVYDRDTRSWTRFMDSRRHLGNSRAFE-----AAALVSLN 369
+G LY+ E D K+++YD +W + + +G+ E A L LN
Sbjct: 350 VIDGDLYALEPSTSSDRGKIKIYDPQEDAW-KVAIGQVPVGDFAESECPYLLAGFLGKLN 408
Query: 370 GKICIIRNNMSITLVDVSNTPTVIEINNAHMWDVFARKGQHRSFIANLWFTIAGRNF-KT 428
I + + ++I DV +E++ + NLW I +N
Sbjct: 409 LIIKDVDSKINIMQTDVLKP---VELSAPGNGPTCQNQQLSSEQETNLWKVIVSKNLAAA 465
Query: 429 HIIHCQVLQV 438
++ CQVL +
Sbjct: 466 ELVSCQVLNI 475
>Os02g0574900 Cyclin-like F-box domain containing protein
Length = 460
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 180/462 (38%), Gaps = 110/462 (23%)
Query: 60 NKRKSRSSHKERCRTQAXXXXXXXXXXAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYY 119
NKR S+++ C + + L R+PRL + L+LV + W ++ +
Sbjct: 26 NKRVKISTYE--CDSFQRIIPTLPDELSFQILARLPRLYYLKLKLVSQAWKAAITSSELS 83
Query: 120 SLRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPAEYSE------------ 167
LR++LG+ EEW++V + K+ +A DP+ + W+ LPP+P+ SE
Sbjct: 84 QLRRELGLTEEWLYVLTKLEPNKLDCYALDPLFRKWQRLPPMPSFVSEEESTGRTQSSWF 143
Query: 168 ----AVGF------------------------GCA--VLSGCYLYLFGGKDPVRGSMRRV 197
VG GC+ V GC LY+FGG R
Sbjct: 144 QTWNVVGSSIRIADFIKGWFRRRYGLDQMPFCGCSVGVADGC-LYVFGGFS--RAVALNC 200
Query: 198 VF-YNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQ--RTLRSAEFYDPNRN 254
VF YN +N W M+ R + ++ ++LYV GG G LRS E +DP
Sbjct: 201 VFRYNPCLNVWQEVSPMISGRAFSKAALLQSKLYVVGGVSRGRNGLLPLRSGEVFDPKTG 260
Query: 255 RWSYISEM--------------------STGMVPFIGVVYDGKWFLKGLDSHRQVVSEVY 294
WS + EM +TGM + G +Y + L + E+Y
Sbjct: 261 IWSELPEMPFMKAQVLPTAFLADVLKPIATGMASYKGKLYVPQ-SLYSWPFFFDIGGEIY 319
Query: 295 MPTSNVWSVTADEMVTGW------RNPSICFNGRLYSAE---CRDGCKLRVYDRDTRSWT 345
P N W AD + GW I N LY+ E D +++ YD + +W
Sbjct: 320 DPELNSWETMADGLGDGWPARQAGTKLGIVVNEELYTLEPSSSLDSGQIKRYDSEQDTWK 379
Query: 346 RFMDSRRHLGNSRAFEAAALVSLNGKICII----RNNMSITLV----DVSNTPTVIEINN 397
+ + A L L+GK+ +I NN+ + ++ N+P+ I
Sbjct: 380 TIVPQVPVHDFTDAEAPFLLAGLHGKVHVITKEANNNLQVMQAVLQNNIENSPSEENI-- 437
Query: 398 AHMWDVFARKGQHRSFIANLWFTIAGRNFKT-HIIHCQVLQV 438
+W +A +NF + ++ CQVL V
Sbjct: 438 -------------------IWNILASKNFGSAELVSCQVLDV 460
>Os02g0114600 Cyclin-like F-box domain containing protein
Length = 360
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 131/310 (42%), Gaps = 21/310 (6%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWH 146
AI CL RVPR H LR V KRW LLS ++S RK+ + E WV+V R K
Sbjct: 34 AILCLARVPRRYHNALRCVSKRWRALLSSEEWHSCRKRNNLDEPWVYVICRSTGIKCYVL 93
Query: 147 AFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFGGKDPVRGSMRRVVFYNARINK 206
A DP + K + + S G L L+L GG ++ + V Y+A N
Sbjct: 94 APDPTTRSLKIMQVIEPPCSSREGISIETLDK-RLFLLGGCSWLKDANDEVFCYDASSNC 152
Query: 207 WLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYISE--MST 264
W M R F S ++ +LY+ GG ++ S + YDP N W ++
Sbjct: 153 WSSVAPMPTARCYFVSAALDKKLYITGG-LGLTDKSPNSWDIYDPVTNSWCVHKNPMLTP 211
Query: 265 GMVPFIGV------VYDGKWFLKGLDSHRQVVSEVYMPTSNVWSVTADEMVTGWRNPSIC 318
+V F+ + V+ W +R + +Y P W T +E+ W ++
Sbjct: 212 DIVKFVALDGELVTVHKAAW-------NRMYFAGIYDPLCRTWRGTENEIALCWSGSTVV 264
Query: 319 FNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHLGNSRAFEAAALVSLNGKICIIRNN 378
+G LY E G KL ++ ++T+ W L + LV + KI II
Sbjct: 265 MDGTLYMLEQSLGTKLMMWQKETKEWIML----GRLSDKLTRPPCELVGIGRKIYIIGRG 320
Query: 379 MSITLVDVSN 388
+SI +D+
Sbjct: 321 LSIVTIDLDT 330
>Os07g0153400 Cyclin-like F-box domain containing protein
Length = 406
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 133/315 (42%), Gaps = 18/315 (5%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNY-YYSLRKKLGMAEEWVFVFKRDR-DRKIS 144
A+ CL+R+P H RLVC+RW+ LL+ ++ RK +G +F R KI
Sbjct: 62 ALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLAFHRCTGKIQ 121
Query: 145 WHAFDPVHQVWKSLPPVPA-EYSEAVGFGCAVL--SGCYLYLFGGKDPVRGSMRRVVFYN 201
W D + W ++P +P + + GFGC + G L G + + V+ Y+
Sbjct: 122 WKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSDMDCPLHLVLKYD 181
Query: 202 ARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYISE 261
N+W ML R F VI+ R+YVAGG Q L SAE DP + W ++
Sbjct: 182 VYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTD-QFELNSAEVLDPVKGVWQPVAS 240
Query: 262 MSTGMVPFIGVVYDGKWFLKG------LDSHRQVVSEVYMPTSNVWSVTADEMVTGWRNP 315
M M V G+ ++ S R +VY P + W V M GW
Sbjct: 241 MGMNMASSDSAVISGRLYVTEGCAWPFFSSPR---GQVYDPKIDRWEVMPVGMREGWTGL 297
Query: 316 SICFNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHLGNSRAFEAAALVSLNGKICII 375
S+ + L+ + K++VYD +T SW R + ++ L KI ++
Sbjct: 298 SVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPM---PERIMKPFSVSCLENKIVVV 354
Query: 376 RNNMSITLVDVSNTP 390
+ + + V P
Sbjct: 355 GRGLHVAIGHVKKQP 369
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 117/272 (43%), Gaps = 22/272 (8%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKIS-W 145
A CL VPR + + V KRW L + ++RK++G EEWV+V D K S W
Sbjct: 57 AKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHW 116
Query: 146 HAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFG-----GKDPVRGSMRRVVFY 200
Q LPP+P GFG VL G + G GK+ V + R Y
Sbjct: 117 EVLGCSGQKHSPLPPMPG--PTKAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYR---Y 171
Query: 201 NARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYIS 260
++ +N+W+ M R F +N +YVAGG +L S E YD +N+W+ I
Sbjct: 172 DSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPN-GDSLSSVEVYDAEQNKWTLIE 230
Query: 261 EMSTGMVPFIGVVYDGKWFLKGLDSHRQVVS----EVYMPTSNVWSVTADE--MVTGWRN 314
+ ++GK ++ G S + + +VY P N W + MVT
Sbjct: 231 SLRRPRWGCFACSFEGKLYVMGGRSRFTIGNTRFVDVYNPNDNSWGEVKNGCVMVTA--- 287
Query: 315 PSICFNGRLYSAECRDGCKLRVYDRDTRSWTR 346
+ +L+ E ++ L V++ SW +
Sbjct: 288 -HAVLDKKLFCIEWKNQRSLAVFNPADNSWQK 318
>Os03g0171600 Cyclin-like F-box domain containing protein
Length = 431
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 134/316 (42%), Gaps = 27/316 (8%)
Query: 42 ARKFVPGAKLCMQPDIKPNKRKSR----SSHKERCRTQAXXXXXXXXXXAITCLMRVPRL 97
++ P + PDI SR S E + I CL+R+ R
Sbjct: 55 GKRSKPPSPQPHTPDISEGHGSSRHVAASGGGEEHGNGSSLIGAIGRDLTINCLLRLSRS 114
Query: 98 EHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKS 157
++ ++ + K + L+ Y LR++ G+AE WV+ + W A+DP + W
Sbjct: 115 DYGSVASLNKDFRSLVRNGEIYRLRRQSGVAEHWVYF----SCNVLEWDAYDPYRERWIQ 170
Query: 158 LPPVPAEYSEAVGFGCAVLSGCYLYLFGGKDPVRGSMRRVVF-YNARINKWLRAPDMLQK 216
+P +P + ++ G L +F +M +VF Y+ N W RA M+
Sbjct: 171 VPKMPPDECFMCSDKESLAVGTELLVF--------AMAHIVFRYSILTNSWTRADPMISP 222
Query: 217 RHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDG 276
R FGS + + YVAGG + R L SAE YD + W+ + M+ GV DG
Sbjct: 223 RCLFGSTSVGAKAYVAGG-TDSSGRILSSAEMYDSETHSWTPLPSMNRARKMCSGVFMDG 281
Query: 277 KWF-LKGLDSHRQVVS--EVYMPTSNVWSVTAD-----EMVTGWRNPSICFNGRLYSAEC 328
K++ + G+ S+ +V++ E Y W V + VTG N LY+A+
Sbjct: 282 KFYVVGGVASNNKVLTCGEEYDLKRRSWRVIENMSEGLNGVTGAPPLIAVVNNELYAADY 341
Query: 329 RDGCKLRVYDRDTRSW 344
+ ++ YD+ W
Sbjct: 342 SEK-DVKKYDKQNNKW 356
>Os10g0388200 Cyclin-like F-box domain containing protein
Length = 347
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 22/249 (8%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWH 146
A+ CL RVP L H L++VC W + +R ++ E+ + V + + W
Sbjct: 14 ALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAFEPENM--WQ 71
Query: 147 AFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFGGK----DPVRGSMRRVVF--- 199
+DP+ W +LP +P++ FG A ++G LY+ GG DP+ G R+
Sbjct: 72 LYDPLRDKWITLPVMPSQIRNIARFGVASVAG-KLYVIGGGSDRVDPLTGDHDRIFASNE 130
Query: 200 ---YNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRW 256
Y+ W++ ML R F C ++ + VAGG ++++ AE Y+P + W
Sbjct: 131 VWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGG-FTNCRKSISKAEIYNPEADTW 189
Query: 257 SYISEMSTGMVPFI-GVVYDGKWFLKGLDSHRQVVSEVYMPTSNVWSVTADEMVTGWRNP 315
+ ++ G+V GK + H+ + + + N W+V E + + P
Sbjct: 190 EPLPDLRQAHSSACSGLVIKGKMHVL----HKGLPTVQILEDGNAWAV---EDYSWLQGP 242
Query: 316 SICFNGRLY 324
G LY
Sbjct: 243 MAMVRGELY 251
>Os04g0380300 Cyclin-like F-box domain containing protein
Length = 375
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 22/273 (8%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVF-VFKRDRDRKISW 145
A CL VPR + V K W + + ++RK++G EE ++ + D + W
Sbjct: 47 AKVCLALVPRSYFPVMGAVSKSWMSFIGSKEFIAVRKEVGRLEERIYALITGDGGKGPYW 106
Query: 146 HAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFG-GKDPVRGSMRRVVF-YNAR 203
+ Q + LPP+P GF VL G L + G G D + + V+ Y+AR
Sbjct: 107 EVLGSLEQQNRMLPPMPG--LTKAGFSVVVLDGKLLVMAGYGVDYGKECVSDEVYQYDAR 164
Query: 204 INKWLRAPDMLQKRHCFGSCVINNRLYVAGG---ECEGIQRTLRSAEFYDPNRNRWSYIS 260
+N+W M R F +N +YVAGG + +G L S E YDP RN+W+ I
Sbjct: 165 LNRWAALAKMNVARRDFACAEVNGAVYVAGGFGSDGDG----LSSVEVYDPQRNKWTIIE 220
Query: 261 EMSTGMVPFIGVVYDGKWFLKGLDSHRQVVS----EVYMPTSNVWSVTADE--MVTGWRN 314
+ ++GK ++ G S + + +VY P + W+ MVT
Sbjct: 221 SLRRPRWGSFACSFNGKLYIMGGRSSFTIGNSRFIDVYDPILHSWTEIKKGCVMVTS--- 277
Query: 315 PSICFNGRLYSAECRDGCKLRVYDRDTRSWTRF 347
N RL+ E ++ L +++ SW +
Sbjct: 278 -HAVINKRLFCIEWKNQRSLAIFNPSDSSWQKI 309
>Os02g0748300 Similar to VMP3 protein
Length = 426
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 20/270 (7%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWH 146
+I+CL R R ++ ++ V + ++ L+ Y R++LG+AE WV+ ++ W
Sbjct: 96 SISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQLGIAEHWVYFSCNVQE----WE 151
Query: 147 AFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFGGKDPVRGSMRRVVFYNARINK 206
A+DP W +LP +P ++ G L +F GK+ + V+ Y+ N
Sbjct: 152 AYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVF-GKEILS---HIVLSYSILTNS 207
Query: 207 WLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYISEMSTGM 266
W DM R FGS + VAGG + R LRSAE Y+ RW + M+
Sbjct: 208 WSPGVDMNAPRCLFGSASFGEKAIVAGG-MDAQGRVLRSAELYNSETKRWITLPCMNKAR 266
Query: 267 VPFIGVVYDGKWF-LKGLDSHRQVVS--EVYMPTSNVWSVTADEMVTGWRNPS------I 317
GV +GK++ + G+ S+ +V++ E Y W V + M G S
Sbjct: 267 RMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVI-ENMSEGLNGASGAPPLVA 325
Query: 318 CFNGRLYSAECRDGCKLRVYDRDTRSWTRF 347
LY+A+ G +R Y+ +WT
Sbjct: 326 VVENELYAAQ-YAGKLVRKYNIKDNTWTTL 354
>Os04g0619300 Cyclin-like F-box domain containing protein
Length = 455
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 18/267 (6%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWH 146
A CL R ++ +L + K++N L++ Y Y LR+K G+ E WV++ + W
Sbjct: 122 AQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLAC----SLMPWE 177
Query: 147 AFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFGGKDPVRGSMRRVVFYNARINK 206
AFDP + W LP +P + + ++ G L +FG + + + YN
Sbjct: 178 AFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGRE----YTGLAIWMYNLLARG 233
Query: 207 WLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYISEMSTGM 266
W R M R F S VAGG C+ + L+SAE Y+ W + +M+
Sbjct: 234 WSRCTPMNLPRCLFASGSFGEIAIVAGG-CDKNGQVLKSAELYNSETGHWETLPDMNLPR 292
Query: 267 VPFIGVVYDGKWF-LKGLDSHRQVVS--EVYMPTSNVWSVTADEMVTGW---RNPSI--C 318
G DGK++ + G+ S R ++ E Y + W D G ++P +
Sbjct: 293 RLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDMYPGGTSASQSPPLVAV 352
Query: 319 FNGRLYSAECRDGCKLRVYDRDTRSWT 345
N +LY+A+ ++ YD+ +W
Sbjct: 353 VNNQLYAADQATNV-VKKYDKGNNTWN 378
>Os11g0602800 Galactose oxidase, central domain containing protein
Length = 432
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 22/268 (8%)
Query: 87 AITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWH 146
AITCL+ PR + + + + + L+ Y LR++ + E ++ + W
Sbjct: 102 AITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYC----SCNVLEWD 157
Query: 147 AFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFGGKDPVRGSMRRVVFYNARINK 206
FDP Q W ++P +P + ++ G + +FG K +R Y+ N
Sbjct: 158 GFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFGKKVEAHVVLR----YSLLSNS 213
Query: 207 WLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYISEMSTGM 266
W M R FGS + VAGG G TL SAE YD W+ + M+
Sbjct: 214 WTTGDMMNSPRCLFGSASFGEKAIVAGGI--GDNGTLSSAELYDSEAKTWTTLPSMNRAR 271
Query: 267 VPFIGVVYDGKWFLKG--LDSHRQVVS--EVYMPTSNVWSVTADEMVTGWRNPS------ 316
G DGK+++ G D+H ++++ E + W + D M +G S
Sbjct: 272 KMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRLIPD-MASGLNGGSGAPPLV 330
Query: 317 ICFNGRLYSAECRDGCKLRVYDRDTRSW 344
N LY+A+ + ++R YD+ +W
Sbjct: 331 AVVNNELYAADYAEK-EVRRYDKVNNAW 357
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.138 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,132,940
Number of extensions: 623470
Number of successful extensions: 1774
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1721
Number of HSP's successfully gapped: 17
Length of query: 438
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 334
Effective length of database: 11,605,545
Effective search space: 3876252030
Effective search space used: 3876252030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 157 (65.1 bits)