Os02g0574900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0574900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.67 | 0.219 | 9 | 1.23 | 0.766 | 0.672 | -0.376 | -0.0159 | 0.214 | 7.51 | 29.44 | 110 | -- | -- |
| 21.63 | 0.217 | 9 | 1.21 | 0.749 | 0.672 | -0.376 | -- | 0.209 | 7.52 | 29.5 | 133 | -- | -- |
| 21.98 | 0.218 | 9 | 1.23 | 0.74 | 0.68 | -- | -0.0431 | 0.221 | 7.48 | 29.3 | 174 | -- | -- |
| 21.98 | 0.218 | 9 | 1.22 | 0.739 | 0.678 | -- | -- | 0.218 | 7.48 | 29.3 | 174 | -- | -- |
| 42.72 | 0.304 | 9 | 1.41 | -- | 1.26 | -- | -0.279 | 0.316 | -- | 31.64 | 402 | -- | -- |
| 27.79 | 0.247 | 9.03 | 1.06 | 0.873 | -- | -0.398 | -- | 0.0785 | 6.65 | -- | -- | -- | -- |
| 28.19 | 0.249 | 9.03 | 1.05 | 0.872 | -- | -- | -- | 0.0798 | 6.67 | -- | -- | -- | -- |
| 42.75 | 0.305 | 9 | 1.35 | -- | 1.24 | -- | -- | 0.31 | -- | 31.21 | 407 | -- | -- |
| 56.96 | 0.353 | 9.05 | -- | 0.869 | 0.13 | -- | -- | -0.0146 | 6.78 | 29.3 | 174 | -- | -- |
| 67.83 | 0.385 | 9.05 | 1.07 | -- | -- | -- | -- | 0.0972 | -- | -- | -- | -- | -- |
| 57.22 | 0.354 | 9.06 | -- | 0.885 | -- | -- | -- | -0.0371 | 6.6 | -- | -- | -- | -- |
| 87.14 | 0.435 | 9.05 | -- | -- | 0.82 | -- | -- | 0.0736 | -- | 39.62 | 388 | -- | -- |
| 98.03 | 0.462 | 9.08 | -- | -- | -- | -- | -- | -0.0215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.72 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 8 | 20.40 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 47 | 20.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 48 | 20.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 49 | 20.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 52 | 20.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 65 | 21.11 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 66 | 21.12 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 92 | 21.35 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 102 | 21.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 120 | 21.47 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 128 | 21.52 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 160 | 21.71 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 173 | 21.76 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 177 | 21.78 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 197 | 21.82 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 209 | 21.84 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 218 | 21.87 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 219 | 21.87 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 262 | 21.97 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 266 | 21.99 | temperature | 30.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 275 | 22.01 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 279 | 22.03 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 319 | 22.10 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 329 | 22.13 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 365 | 22.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 378 | 22.25 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 379 | 22.25 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 386 | 22.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 399 | 22.28 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 407 | 22.30 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 425 | 22.32 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 610 | 22.62 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 628 | 22.64 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 691 | 22.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 700 | 22.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 703 | 22.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 715 | 22.73 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 725 | 22.74 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 755 | 22.77 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 765 | 22.78 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 779 | 22.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 810 | 22.82 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 817 | 22.82 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 18 |
| 827 | 22.83 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 833 | 22.83 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 842 | 22.84 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 882 | 22.87 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 884 | 22.87 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 937 | 22.90 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 938 | 22.90 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 958 | 22.91 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 11 |
| 961 | 22.91 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 965 | 22.91 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 981 | 22.91 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 985 | 22.92 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 16 |