Os11g0602800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galactose oxidase, central domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0602800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Galactose oxidase, central domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.17 | 0.323 | 11 | 0.349 | 1.09 | 0.644 | 0.27 | 0.434 | -0.808 | 7.95 | 75 | 1192 | -- | -- |
| 47.37 | 0.321 | 11 | 0.318 | 1.1 | 0.691 | 0.247 | -- | -0.813 | 7.97 | 74.79 | 1165 | -- | -- |
| 47.37 | 0.321 | 11 | 0.351 | 1.08 | 0.641 | -- | 0.382 | -0.81 | 7.92 | 75 | 1204 | -- | -- |
| 47.53 | 0.321 | 11 | 0.322 | 1.1 | 0.688 | -- | -- | -0.809 | 7.96 | 74.46 | 1166 | -- | -- |
| 106.73 | 0.481 | 11 | 0.419 | -- | 0.588 | -- | 0.573 | -0.808 | -- | 82 | 1391 | -- | -- |
| 57.77 | 0.356 | 11 | 0.444 | 1.06 | -- | 0.151 | -- | -0.859 | 7.51 | -- | -- | -- | -- |
| 57.83 | 0.356 | 11 | 0.448 | 1.06 | -- | -- | -- | -0.859 | 7.51 | -- | -- | -- | -- |
| 107.16 | 0.482 | 11 | 0.358 | -- | 0.645 | -- | -- | -0.823 | -- | 81.85 | 1386 | -- | -- |
| 50.24 | 0.33 | 11 | -- | 1.1 | 0.757 | -- | -- | -0.803 | 7.96 | 72.72 | 1168 | -- | -- |
| 117.41 | 0.506 | 11 | 0.464 | -- | -- | -- | -- | -0.843 | -- | -- | -- | -- | -- |
| 63.12 | 0.372 | 11 | -- | 1.06 | -- | -- | -- | -0.909 | 7.48 | -- | -- | -- | -- |
| 110.37 | 0.489 | 11 | -- | -- | 0.702 | -- | -- | -0.849 | -- | 79 | 1388 | -- | -- |
| 123.08 | 0.518 | 11.1 | -- | -- | -- | -- | -- | -0.894 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.38 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 14 | 40.07 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 19 | 40.18 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 21 | 40.21 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 23 | 40.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 31 | 40.35 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 32 | 40.36 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 34 | 40.39 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 53 | 40.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 64 | 40.78 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 76 | 40.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 77 | 40.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 94 | 40.95 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 12 |
| 101 | 40.98 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 2 | 9 |
| 199 | 41.38 | wind | 1.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 236 | 41.55 | wind | 9.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 443 | 42.34 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 498 | 42.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 500 | 42.53 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 507 | 42.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 508 | 42.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 544 | 42.68 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 548 | 42.70 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 14 |
| 554 | 42.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 558 | 42.73 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 563 | 42.74 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 587 | 42.82 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 590 | 42.83 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 618 | 42.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 621 | 42.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 626 | 42.92 | wind | 3.0 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 641 | 42.96 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 649 | 42.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 652 | 42.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 685 | 43.08 | wind | 3.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 722 | 43.16 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 728 | 43.18 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 746 | 43.23 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 767 | 43.30 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 812 | 43.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 832 | 43.47 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 846 | 43.49 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 856 | 43.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 868 | 43.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 871 | 43.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 878 | 43.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |