BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0602800 Os11g0602800|AK070903
(432 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0602800 Galactose oxidase, central domain containing p... 808 0.0
Os03g0171600 Cyclin-like F-box domain containing protein 466 e-131
Os02g0748300 Similar to VMP3 protein 458 e-129
Os04g0619300 Cyclin-like F-box domain containing protein 363 e-100
Os02g0504900 Cyclin-like F-box domain containing protein 90 2e-18
Os10g0388200 Cyclin-like F-box domain containing protein 89 6e-18
Os10g0409900 Cyclin-like F-box domain containing protein 84 2e-16
Os03g0167800 Cyclin-like F-box domain containing protein 83 3e-16
Os04g0380300 Cyclin-like F-box domain containing protein 82 8e-16
Os10g0363600 Cyclin-like F-box domain containing protein 75 1e-13
Os07g0153400 Cyclin-like F-box domain containing protein 73 4e-13
Os06g0594400 Cyclin-like F-box domain containing protein 72 8e-13
Os11g0194000 68 1e-11
Os02g0208700 Galactose oxidase, central domain containing p... 65 8e-11
>Os11g0602800 Galactose oxidase, central domain containing protein
Length = 432
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/432 (91%), Positives = 396/432 (91%)
Query: 1 MLGDQRRKFLLXXXXXXXXXXXXXXXNLXXXXXXXXXXXXXXRKGXXXXXXXLLNRRSKK 60
MLGDQRRKFLL NL RKG LLNRRSKK
Sbjct: 1 MLGDQRRKFLLESASSSSEEVVSRSRNLAVESSAVAVTAAGVRKGEEVEEEELLNRRSKK 60
Query: 61 NKVASDSGNSGTGVWDSEMQDADQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACL 120
NKVASDSGNSGTGVWDSEMQDADQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACL
Sbjct: 61 NKVASDSGNSGTGVWDSEMQDADQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACL 120
Query: 121 NRSFCSLMRSGQLYRLRREARIVEHMIYCSCNVLEWDGFDPCRQRWFNIPSMPPIECFTL 180
NRSFCSLMRSGQLYRLRREARIVEHMIYCSCNVLEWDGFDPCRQRWFNIPSMPPIECFTL
Sbjct: 121 NRSFCSLMRSGQLYRLRREARIVEHMIYCSCNVLEWDGFDPCRQRWFNIPSMPPIECFTL 180
Query: 181 ADKESLAVGTNILVFGKKVEAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAG 240
ADKESLAVGTNILVFGKKVEAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAG
Sbjct: 181 ADKESLAVGTNILVFGKKVEAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAG 240
Query: 241 GIGDNGTLSSAELYDSEAKTWTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCG 300
GIGDNGTLSSAELYDSEAKTWTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCG
Sbjct: 241 GIGDNGTLSSAELYDSEAKTWTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCG 300
Query: 301 EEFDLEKGTWRLIPDMASGLNGGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITL 360
EEFDLEKGTWRLIPDMASGLNGGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITL
Sbjct: 301 EEFDLEKGTWRLIPDMASGLNGGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITL 360
Query: 361 GSLPEKYTSVNGWGLAFRGCGDKLIVIGGMSAPGGGVIEICSWIPNNGQPDWKIIGSRRS 420
GSLPEKYTSVNGWGLAFRGCGDKLIVIGGMSAPGGGVIEICSWIPNNGQPDWKIIGSRRS
Sbjct: 361 GSLPEKYTSVNGWGLAFRGCGDKLIVIGGMSAPGGGVIEICSWIPNNGQPDWKIIGSRRS 420
Query: 421 GSFVYNCAVMGC 432
GSFVYNCAVMGC
Sbjct: 421 GSFVYNCAVMGC 432
>Os03g0171600 Cyclin-like F-box domain containing protein
Length = 431
Score = 466 bits (1199), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/380 (60%), Positives = 278/380 (73%), Gaps = 7/380 (1%)
Query: 56 RRSKKNKVASDSGNSGTGVWDSEMQDADQNGE--ANTSELIGAIGRELAITCLLHTPRSY 113
+RSK + + G S A GE N S LIGAIGR+L I CLL RS
Sbjct: 56 KRSKPPSPQPHTPDISEGHGSSRHVAASGGGEEHGNGSSLIGAIGRDLTINCLLRLSRSD 115
Query: 114 YGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYCSCNVLEWDGFDPCRQRWFNIPSMP 173
YG +A LN+ F SL+R+G++YRLRR++ + EH +Y SCNVLEWD +DP R+RW +P MP
Sbjct: 116 YGSVASLNKDFRSLVRNGEIYRLRRQSGVAEHWVYFSCNVLEWDAYDPYRERWIQVPKMP 175
Query: 174 PIECFTLADKESLAVGTNILVFGKKVEAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFG 233
P ECF +DKESLAVGT +LVF AH+V RYS+L+NSWT D M SPRCLFGS S G
Sbjct: 176 PDECFMCSDKESLAVGTELLVFAM---AHIVFRYSILTNSWTRADPMISPRCLFGSTSVG 232
Query: 234 EKAIVAGGIGDNG-TLSSAELYDSEAKTWTTLPSMNRARKMCSGFFMDGKFYVIGGKADN 292
KA VAGG +G LSSAE+YDSE +WT LPSMNRARKMCSG FMDGKFYV+GG A N
Sbjct: 233 AKAYVAGGTDSSGRILSSAEMYDSETHSWTPLPSMNRARKMCSGVFMDGKFYVVGGVASN 292
Query: 293 HNEILNCGEEFDLEKGTWRLIPDMASGLNGGSGAPPLVAVVNNELYAADYAEKEVRRYDK 352
N++L CGEE+DL++ +WR+I +M+ GLNG +GAPPL+AVVNNELYAADY+EK+V++YDK
Sbjct: 293 -NKVLTCGEEYDLKRRSWRVIENMSEGLNGVTGAPPLIAVVNNELYAADYSEKDVKKYDK 351
Query: 353 VNNAWITLGSLPEKYTSVNGWGLAFRGCGDKLIVIGGMSAPGGGVIEICSWIPNNGQPDW 412
NN WITLG LPE+ S+NGWGLAFR CGD+LIVIGG GG IE+ SW P+ P W
Sbjct: 352 QNNKWITLGKLPERSVSMNGWGLAFRACGDRLIVIGGPRTSIGGTIELNSWTPDERPPVW 411
Query: 413 KIIGSRRSGSFVYNCAVMGC 432
+I R SG+FVYNCAVMGC
Sbjct: 412 NLIARRPSGNFVYNCAVMGC 431
>Os02g0748300 Similar to VMP3 protein
Length = 426
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/354 (62%), Positives = 274/354 (77%), Gaps = 2/354 (0%)
Query: 80 QDADQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRRE 139
Q ++ G +++S LI +IGR+ +I+CL RS YG IA +NR+F SL+RSG+LY+ RR+
Sbjct: 74 QGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQ 133
Query: 140 ARIVEHMIYCSCNVLEWDGFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFGKKV 199
I EH +Y SCNV EW+ +DP R RW +P MP ECF +DKESLAVGT +LVFGK++
Sbjct: 134 LGIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVFGKEI 193
Query: 200 EAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGDNG-TLSSAELYDSEA 258
+H+VL YS+L+NSW+ G MN+PRCLFGSASFGEKAIVAGG+ G L SAELY+SE
Sbjct: 194 LSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAELYNSET 253
Query: 259 KTWTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRLIPDMAS 318
K W TLP MN+AR+MCSG FM+GKFYVIGG A N E+L CGEE+DLEKGTWR+I +M+
Sbjct: 254 KRWITLPCMNKARRMCSGVFMNGKFYVIGGMASN-TEVLTCGEEYDLEKGTWRVIENMSE 312
Query: 319 GLNGGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITLGSLPEKYTSVNGWGLAFR 378
GLNG SGAPPLVAVV NELYAA YA K VR+Y+ +N W TLG LPE+ +VNGWG+AFR
Sbjct: 313 GLNGASGAPPLVAVVENELYAAQYAGKLVRKYNIKDNTWTTLGELPERPEAVNGWGIAFR 372
Query: 379 GCGDKLIVIGGMSAPGGGVIEICSWIPNNGQPDWKIIGSRRSGSFVYNCAVMGC 432
GCG++L+VIGG GGG+IE+ SWIP G W +IGS+ SG+FVYNCAVMGC
Sbjct: 373 GCGERLLVIGGPRVMGGGMIELHSWIPREGPLRWNMIGSKPSGNFVYNCAVMGC 426
>Os04g0619300 Cyclin-like F-box domain containing protein
Length = 455
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/354 (51%), Positives = 232/354 (65%), Gaps = 5/354 (1%)
Query: 83 DQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARI 142
D + + + +LA CL RS Y ++CLN+ F L+ SG LYRLRR+ I
Sbjct: 103 DSSASGSNDCFFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGI 162
Query: 143 VEHMIYCSCNVLEWDGFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFGKKVEAH 202
VEH +Y +C+++ W+ FDP R+RW +P MP ECF+ ADKESLAVGT +LVFG++
Sbjct: 163 VEHWVYLACSLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREYTGL 222
Query: 203 VVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGDNG-TLSSAELYDSEAKTW 261
+ Y+LL+ W+ MN PRCLF S SFGE AIVAGG NG L SAELY+SE W
Sbjct: 223 AIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHW 282
Query: 262 TTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRLIPDMASGLN 321
TLP MN R++ SGFFMDGKFYVIGG + + L CGEE++LE TWR I DM G
Sbjct: 283 ETLPDMNLPRRLSSGFFMDGKFYVIGG-VSSQRDSLTCGEEYNLETRTWRRIHDMYPGGT 341
Query: 322 GGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITLGSLPEKYTSVNGWGLAFRGCG 381
S +PPLVAVVNN+LYAAD A V++YDK NN W + LP + S NGWGLAF+ CG
Sbjct: 342 SASQSPPLVAVVNNQLYAADQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKACG 401
Query: 382 DKLIVIGGMSAPGGGVIEICSWIPN--NGQPDWKIIGSR-RSGSFVYNCAVMGC 432
D+L+VIGG P G VI + SW P NG DW+++ + R+G FVYNCA+MGC
Sbjct: 402 DRLLVIGGHRVPRGEVILLHSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC 455
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 93 LIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIY---- 148
LI + +LA CL PRS + ++ +++ + S + S + +R+E +E +Y
Sbjct: 48 LIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTA 107
Query: 149 -CSCNVLEWDGFDPCRQRWFNIPSMP-PIEC---FTLADKESLAVGTNILVFGKKVEAHV 203
W+ Q+ +P MP P + + D + + GK+ +
Sbjct: 108 DAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAADHGKECVSDE 167
Query: 204 VLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGDNG-TLSSAELYDSEAKTWT 262
V RY N W MN RC F A VAGG G NG +LSS E+YD+E WT
Sbjct: 168 VYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAEQNKWT 227
Query: 263 TLPSMNRARKMCSGFFMDGKFYVIGGKA 290
+ S+ R R C +GK YV+GG++
Sbjct: 228 LIESLRRPRWGCFACSFEGKLYVMGGRS 255
>Os10g0388200 Cyclin-like F-box domain containing protein
Length = 347
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 40/322 (12%)
Query: 91 SELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYCS 150
S LI + E+A+ CL P + ++ + S+ + +R+G+L ++R + E ++
Sbjct: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL 62
Query: 151 CNVLE--WDGFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFG------------ 196
E W +DP R +W +P MP + +A +V + V G
Sbjct: 63 AFEPENMWQLYDPLRDKWITLPVMPS-QIRNIARFGVASVAGKLYVIGGGSDRVDPLTGD 121
Query: 197 --KKVEAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGD-NGTLSSAEL 253
+ ++ V Y L W M R +F + IVAGG + ++S AE+
Sbjct: 122 HDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAEI 181
Query: 254 YDSEAKTWTTLPSMNRAR-KMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRL 312
Y+ EA TW LP + +A CSG + GK +V+ K +IL G + +E +W
Sbjct: 182 YNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVL-HKGLPTVQILEDGNAWAVEDYSWLQ 240
Query: 313 IPDMASGLNGGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITLGSLPEKYTSVNG 372
P +A+V ELY + +R + ++ S ++ S G
Sbjct: 241 GP---------------MAMVRGELYVLSNSCIMKQRGVNFPDKMVSCAS---EFQSRIG 282
Query: 373 WGLAFRGCGDKLIVIGGMSAPG 394
+G+ G GD + ++GG+ PG
Sbjct: 283 FGMI--GLGDNIYLVGGVIGPG 302
>Os10g0409900 Cyclin-like F-box domain containing protein
Length = 442
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 115/279 (41%), Gaps = 22/279 (7%)
Query: 91 SELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYCS 150
+ L+ + +LAI CL+ PR + + + + + L+ Y LR+ + E +Y
Sbjct: 80 APLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYSLRKRNGMAEEWVYVF 139
Query: 151 CNVLE----WDGFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFGKKVEAHVVLR 206
E W FDP Q W ++P +P L ++ G + +FG K +R
Sbjct: 140 KRDREGKISWHAFDPLHQLWKSLPPVPAEYSEALGFGCAVLSGCYLYLFGGKDPLRGSMR 199
Query: 207 ----YSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGI--GDNGTLSSAELYDSEAKT 260
Y+ +N W M R FGS VAGG G TL SAE+YD
Sbjct: 200 RVVFYNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLPSAEVYDPNRNR 259
Query: 261 WTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRLIPD-MASG 319
W + MN G DGK+++ G D+H ++ + E + W I D M +G
Sbjct: 260 WACVAEMNNGMVPFIGVVYDGKWFLKG--LDSHRQVTS--EVYLPSSNLWSTIDDEMVTG 315
Query: 320 LNGGSGAPPLVAVVNNELYAADYAEK-EVRRYDKVNNAW 357
S N +LY++D + ++R YD W
Sbjct: 316 WRNPS------ITFNGKLYSSDCRDGCKLRVYDPNTGTW 348
>Os03g0167800 Cyclin-like F-box domain containing protein
Length = 438
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 22/279 (7%)
Query: 91 SELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYC- 149
+ L+ + +LAITCL+ PR + + + + + L+ Y LR++ + E ++
Sbjct: 76 APLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVF 135
Query: 150 ---SCNVLEWDGFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFGKKVEAHVVLR 206
+ W FDP Q W ++P +P + ++ G + +FG K +R
Sbjct: 136 KRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFGGKDPVRGSMR 195
Query: 207 ----YSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGG--IGDNGTLSSAELYDSEAKT 260
Y+ N W M R FGS + VAGG G TL SAE YD
Sbjct: 196 RVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNR 255
Query: 261 WTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRLIPD-MASG 319
W+ + M+ G DGK+++ G D+H ++++ E + W + D M +G
Sbjct: 256 WSYISEMSTGMVPFIGVVYDGKWFLKG--LDSHRQVVS--EVYMPTSNVWSVTADEMVTG 311
Query: 320 LNGGSGAPPLVAVVNNELYAADYAEK-EVRRYDKVNNAW 357
S N LY+A+ + ++R YD+ +W
Sbjct: 312 WRNPS------ICFNGRLYSAECRDGCKLRVYDRDTRSW 344
>Os04g0380300 Cyclin-like F-box domain containing protein
Length = 375
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 93 LIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYCSCN 152
LI + +LA CL PRSY+ ++ +++S+ S + S + +R+E +E IY
Sbjct: 38 LIPGLPEDLAKVCLALVPRSYFPVMGAVSKSWMSFIGSKEFIAVRKEVGRLEERIYALIT 97
Query: 153 V-----LEWDGFDPCRQRWFNIPSMPPIE----CFTLADKESLAVGTNILVFGKKVEAHV 203
W+ Q+ +P MP + + D + L + + +GK+ +
Sbjct: 98 GDGGKGPYWEVLGSLEQQNRMLPPMPGLTKAGFSVVVLDGKLLVMAGYGVDYGKECVSDE 157
Query: 204 VLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGDNGT-LSSAELYDSEAKTWT 262
V +Y N W MN R F A VAGG G +G LSS E+YD + WT
Sbjct: 158 VYQYDARLNRWAALAKMNVARRDFACAEVNGAVYVAGGFGSDGDGLSSVEVYDPQRNKWT 217
Query: 263 TLPSMNRARKMCSGFFMDGKFYVIGGKA 290
+ S+ R R +GK Y++GG++
Sbjct: 218 IIESLRRPRWGSFACSFNGKLYIMGGRS 245
>Os10g0363600 Cyclin-like F-box domain containing protein
Length = 475
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 93/236 (39%), Gaps = 23/236 (9%)
Query: 93 LIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYCSCN 152
LI + E+++ L PR Y ++RS+ + + +LYR+R+E + E +Y
Sbjct: 45 LIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTK 104
Query: 153 V----LEWDGFDPCRQRWFNIPSMPPI----ECFTLADKESLAVGTNILVFGKKVEAHVV 204
L W+ FDP +W +P MP I EC G L G + A +
Sbjct: 105 SDDGKLVWNAFDPVCGQWQRLPLMPGISHGGEC---------KRGIPGLWLGDLLSAGI- 154
Query: 205 LRYSLLSNSW--TTGDMMNSPRCLFGSASFGEKAIVAGGIGDNGTLSSAELYDSEAKTWT 262
R S + W + P C + V GG + YD W
Sbjct: 155 -RVSDVIRGWLGQRDSLDRLPFCGCAIGTVNGCIYVLGGFSRGSAMKCVWRYDPFVNAWQ 213
Query: 263 TLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEI--LNCGEEFDLEKGTWRLIPDM 316
+ SM+ R C ++ K YV+GG + N + L E FD G W +PD+
Sbjct: 214 EVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVPDI 269
>Os07g0153400 Cyclin-like F-box domain containing protein
Length = 406
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 31/336 (9%)
Query: 72 TGVWDSEMQDADQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSG 131
T S M +D + + LI + + A+ CLL P + + R + L+
Sbjct: 32 TSALPSSMPASDLEQASWETPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADK 91
Query: 132 QLYRLRRE-----ARIVEHMIYCSCN-VLEWDGFDPCRQRWFNIPSMPPIE--------C 177
+ ++R+ + ++ + + C ++W D W IP+MP + C
Sbjct: 92 ARFFMQRKVMGFRSPLLFTLAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGC 151
Query: 178 FTLADKESLAVGTNILVFGKKVEAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAI 237
+ +L V LV H+VL+Y + N WT M + R F +
Sbjct: 152 VAIPSDGTLLVCGG-LVSDMDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVY 210
Query: 238 VAGGIG-DNGTLSSAELYDSEAKTWTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEI 296
VAGG D L+SAE+ D W + SM + G+ YV G A
Sbjct: 211 VAGGYSTDQFELNSAEVLDPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSS 270
Query: 297 LNCGEEFDLEKGTWRLIP-DMASGLNGGSGAPPLVAVVNNELYA-ADYAEKEVRRYDKVN 354
G+ +D + W ++P M G G L V++ L+ ++Y +V+ YD
Sbjct: 271 PR-GQVYDPKIDRWEVMPVGMREGWTG------LSVVIDKHLFVISEYERMKVKVYDPET 323
Query: 355 NAWITLG--SLPEKYTSVNGWGLAFRGCGDKLIVIG 388
++W ++ +PE+ + +K++V+G
Sbjct: 324 DSWDSVKGPPMPERIMK----PFSVSCLENKIVVVG 355
>Os06g0594400 Cyclin-like F-box domain containing protein
Length = 381
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 94/259 (36%), Gaps = 37/259 (14%)
Query: 92 ELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRRE---ARIVEHMIY 148
ELI + E+A CL+ + ++R + + + S RLR+ AR ++
Sbjct: 5 ELIPGLPEEVARECLIRVGFDQLPAVRRISRQWKAEVESPAYNRLRKAEGLARPALALVQ 64
Query: 149 CSCNVLEWDG--------------------FDPCRQRWFNIPSMP------PIECFTLAD 182
+ E DP RW +P + P+ C A
Sbjct: 65 ARRELAEAGPAADKQSSAGGVPGNSYRMVLLDPAEGRWTPLPEVGGASGSLPLFCQVAAV 124
Query: 183 KESLAVGTNILVFG-----KKVEAHVVLRYSLLSNSWTTGDMMNSPR-CLFGSASFGEKA 236
+ ++V G VL Y L+ +W G M PR F A+ G K
Sbjct: 125 DGGVEGRKRLVVVGGWDPETWAPTDSVLVYDFLTGAWRRGAAMPGPRRSFFACAAVGGKV 184
Query: 237 IVAGGIGD-NGTLSSAELYDSEAKTWTTLPSMNRARKMCSGFFMDGKFYVIGG-KADNHN 294
VAGG + L SA YD +A W LP M R G +DGKF V+GG
Sbjct: 185 FVAGGHDEEKNALRSALAYDPDADAWAALPDMAEERDEPRGLCVDGKFLVVGGYPTPAQG 244
Query: 295 EILNCGEEFDLEKGTWRLI 313
+ E FD TW +
Sbjct: 245 RFVGSAEWFDPATSTWSAV 263
>Os11g0194000
Length = 93
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 219 MMNSPRCLFGSASFGEKAIVAGGIGDNG-TLSSAELYDSEAKTWTTLPSMNRARKMCSGF 277
M P L G SFGE AIVAGG NG L SAELY+SE W TLP MN AR++ SGF
Sbjct: 5 MQVGPVWLDGQGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLARRLSSGF 64
Query: 278 FMD 280
F+D
Sbjct: 65 FLD 67
>Os02g0208700 Galactose oxidase, central domain containing protein
Length = 375
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 96/257 (37%), Gaps = 30/257 (11%)
Query: 160 DPCRQRWFNIPSMP-----PIECFTLA------DKESLAV--GTNILVFGKKVEAHVVLR 206
DP W +P +P P+ C A ++ L V G + + HV
Sbjct: 37 DPVAGGWAALPPLPGAGGLPLFCQLAAVAACGGERRRLVVVGGWDPETWAPTDAVHV--- 93
Query: 207 YSLLSNSWTTGDMMNSPR-CLFGSASFGEKAIVAGGIGD-NGTLSSAELYDSEAKTWTTL 264
Y LS SW G M PR F A+ G VAGG + L SA YD+EA W L
Sbjct: 94 YDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAVAYDAEADAWVPL 153
Query: 265 PSMNRARKMCSGFFMDGKFYVIGG-KADNHNEILNCGEEFDLEKGTWRLIPDMASGLNGG 323
P M R G + G+F +GG + E FD W P L+ G
Sbjct: 154 PDMAAERDEARGVCVGGRFVAVGGYPTEAQGRFAGSAEAFD--PAAWAWGPVQERVLDEG 211
Query: 324 SGAPPLVAVVNNELYAADYAEKE--VRRYDKVNN---AWITLGSLPEKYTSVNGWGLAFR 378
+ A A Y ++ + D NN AW + SLPE +V A
Sbjct: 212 TCPRTCCAAPAPAAGATMYMLRDGHLAARDATNNGGAAWRAVASLPEDGRAVT----ALA 267
Query: 379 GCGDKLIVIGGMSAPGG 395
GD +V G + GG
Sbjct: 268 AIGDGRVVAIGAGSHGG 284
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,548,627
Number of extensions: 699289
Number of successful extensions: 1640
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1596
Number of HSP's successfully gapped: 16
Length of query: 432
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 328
Effective length of database: 11,605,545
Effective search space: 3806618760
Effective search space used: 3806618760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)