Os02g0504900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0504900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.89 | 0.308 | 12.4 | -1.01 | 0.721 | 1.13 | 0.0255 | -1.01 | -0.0636 | 9.1 | 21.39 | 683 | -- | -- |
| 43.75 | 0.308 | 12.4 | -0.873 | 0.711 | 1.08 | 0.266 | -- | -0.03 | 8.97 | 20.85 | 660 | -- | -- |
| 42.89 | 0.305 | 12.4 | -1.01 | 0.721 | 1.13 | -- | -1.03 | -0.0645 | 9.08 | 21.4 | 679 | -- | -- |
| 43.56 | 0.307 | 12.4 | -0.784 | 0.689 | 1.02 | -- | -- | 0.00908 | 9.43 | 21.37 | 737 | -- | -- |
| 54.81 | 0.345 | 12.4 | -0.848 | -- | 0.909 | -- | 0.0447 | -0.0134 | -- | 17.68 | 1521 | -- | -- |
| 65.86 | 0.38 | 12.3 | -0.516 | 0.381 | -- | -0.0104 | -- | 0.184 | 10.3 | -- | -- | -- | -- |
| 65.86 | 0.38 | 12.3 | -0.517 | 0.381 | -- | -- | -- | 0.184 | 10.3 | -- | -- | -- | -- |
| 53.83 | 0.342 | 12.4 | -0.808 | -- | 0.768 | -- | -- | 0.00619 | -- | 21.53 | 1521 | -- | -- |
| 58.42 | 0.356 | 12.3 | -- | 0.633 | 0.798 | -- | -- | 0.13 | 9.42 | 22.08 | 711 | -- | -- |
| 74.67 | 0.404 | 12.4 | -0.522 | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
| 72.89 | 0.399 | 12.3 | -- | 0.383 | -- | -- | -- | 0.242 | 10.4 | -- | -- | -- | -- |
| 69.19 | 0.387 | 12.4 | -- | -- | 0.555 | -- | -- | 0.136 | -- | 22.3 | 1512 | -- | -- |
| 81.87 | 0.422 | 12.3 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 2 | 40.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 3 | 40.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 19 |
| 9 | 40.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 19 | 41.52 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 20 | 41.53 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 22 | 41.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 32 | 41.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 36 | 42.07 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 19 |
| 98 | 42.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 168 | 43.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 170 | 43.35 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 172 | 43.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 178 | 43.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 206 | 43.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 207 | 43.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 278 | 43.77 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 312 | 43.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 14 |
| 560 | 44.13 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 666 | 44.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 14 |
| 797 | 44.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 988 | 44.47 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |