Os07g0153400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os07g0153400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.58 | 0.272 | 9.84 | -0.188 | 0.776 | -0.782 | 0.476 | -1.38 | 0.253 | 4.97 | 24.93 | 257 | -- | -- |
| 35.89 | 0.279 | 9.87 | -0.405 | 0.801 | -0.638 | 0.121 | -- | 0.206 | 4.99 | 25.95 | 246 | -- | -- |
| 34.08 | 0.272 | 9.85 | -0.225 | 0.771 | -0.76 | -- | -1.15 | 0.245 | 5 | 24.86 | 257 | -- | -- |
| 35.8 | 0.279 | 9.87 | -0.388 | 0.767 | -0.659 | -- | -- | 0.214 | 4.76 | 25.02 | 107 | -- | -- |
| 58.64 | 0.357 | 9.84 | -0.0972 | -- | -0.706 | -- | -1.57 | 0.29 | -- | 25.38 | 1243 | -- | -- |
| 42.14 | 0.304 | 9.84 | -0.235 | 0.677 | -- | 0.109 | -- | 0.339 | 5.19 | -- | -- | -- | -- |
| 42.17 | 0.304 | 9.84 | -0.235 | 0.677 | -- | -- | -- | 0.338 | 5.19 | -- | -- | -- | -- |
| 61.11 | 0.364 | 9.88 | -0.389 | -- | -0.58 | -- | -- | 0.224 | -- | 27.6 | 1228 | -- | -- |
| 39.57 | 0.293 | 9.86 | -- | 0.738 | -0.504 | -- | -- | 0.275 | 4.88 | 25 | 123 | -- | -- |
| 66.17 | 0.38 | 9.85 | -0.212 | -- | -- | -- | -- | 0.355 | -- | -- | -- | -- | -- |
| 43.63 | 0.309 | 9.84 | -- | 0.673 | -- | -- | -- | 0.364 | 5.2 | -- | -- | -- | -- |
| 64.53 | 0.374 | 9.86 | -- | -- | -0.401 | -- | -- | 0.301 | -- | 27.7 | 1224 | -- | -- |
| 67.35 | 0.383 | 9.84 | -- | -- | -- | -- | -- | 0.379 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.23 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 2 | 33.23 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 15 | 33.43 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 41 | 33.59 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 52 | 33.62 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 54 | 33.62 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 67 | 33.69 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 125 | 34.02 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 11 |
| 196 | 34.24 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 202 | 34.26 | temperature | 25 | 270 | < th | dose dependent | sin | 10 | NA |
| 226 | 34.34 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 23 |
| 246 | 34.41 | temperature | 20 | 90 | > th | dose dependent | rect. | 18 | 22 |
| 301 | 34.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 316 | 34.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 324 | 34.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 16 |
| 327 | 34.72 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |
| 328 | 34.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 350 | 34.77 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 426 | 34.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 436 | 34.97 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 492 | 35.05 | temperature | 20 | 10 | > th | dose independent | rect. | 10 | 19 |
| 493 | 35.05 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 20 |
| 555 | 35.17 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 23 |
| 614 | 35.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 634 | 35.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 638 | 35.31 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 685 | 35.37 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 5 | 22 |
| 715 | 35.43 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 23 |
| 759 | 35.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 818 | 35.57 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 840 | 35.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 14 | 16 |
| 842 | 35.60 | temperature | 20 | 270 | < th | dose dependent | sin | 22 | NA |
| 849 | 35.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 883 | 35.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 884 | 35.64 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 22 |
| 894 | 35.65 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 23 |
| 903 | 35.66 | temperature | 20 | 270 | < th | dose independent | rect. | 2 | 22 |
| 917 | 35.67 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 923 | 35.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 996 | 35.74 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |