BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0153400 Os07g0153400|AK069618
(406 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0153400 Cyclin-like F-box domain containing protein 840 0.0
Os06g0655500 Cyclin-like F-box domain containing protein 186 2e-47
Os10g0409900 Cyclin-like F-box domain containing protein 136 2e-32
Os03g0167800 Cyclin-like F-box domain containing protein 136 3e-32
Os10g0363600 Cyclin-like F-box domain containing protein 135 5e-32
Os02g0202900 Cyclin-like F-box domain containing protein 127 1e-29
Os04g0380300 Cyclin-like F-box domain containing protein 116 4e-26
Os02g0504900 Cyclin-like F-box domain containing protein 115 6e-26
Os02g0574900 Cyclin-like F-box domain containing protein 114 1e-25
Os02g0114600 Cyclin-like F-box domain containing protein 99 8e-21
Os03g0171600 Cyclin-like F-box domain containing protein 92 8e-19
Os10g0388200 Cyclin-like F-box domain containing protein 90 3e-18
Os02g0748300 Similar to VMP3 protein 75 6e-14
Os11g0602800 Galactose oxidase, central domain containing p... 73 4e-13
Os04g0619300 Cyclin-like F-box domain containing protein 67 3e-11
>Os07g0153400 Cyclin-like F-box domain containing protein
Length = 406
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/406 (100%), Positives = 406/406 (100%)
Query: 1 MRRVRVSSHQSPVHKLGDSQMKLTPKFRLATTSALPSSMPASDLEQASWETPLIPGLPDD 60
MRRVRVSSHQSPVHKLGDSQMKLTPKFRLATTSALPSSMPASDLEQASWETPLIPGLPDD
Sbjct: 1 MRRVRVSSHQSPVHKLGDSQMKLTPKFRLATTSALPSSMPASDLEQASWETPLIPGLPDD 60
Query: 61 AALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLAFHRCTGKI 120
AALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLAFHRCTGKI
Sbjct: 61 AALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLAFHRCTGKI 120
Query: 121 QWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSDMDCPLHLVLKY 180
QWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSDMDCPLHLVLKY
Sbjct: 121 QWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSDMDCPLHLVLKY 180
Query: 181 DVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLDPVKGVWQPVAS 240
DVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLDPVKGVWQPVAS
Sbjct: 181 DVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLDPVKGVWQPVAS 240
Query: 241 MGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDRWEVMPVGMREGWTGLSVV 300
MGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDRWEVMPVGMREGWTGLSVV
Sbjct: 241 MGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDRWEVMPVGMREGWTGLSVV 300
Query: 301 IDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPERIMKPFSVSCLENKIVVVGRGLHV 360
IDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPERIMKPFSVSCLENKIVVVGRGLHV
Sbjct: 301 IDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPERIMKPFSVSCLENKIVVVGRGLHV 360
Query: 361 AIGHVKKQPGSHPDSRSSSYLIQWQDVDVPREFGDLTPSNSQILYA 406
AIGHVKKQPGSHPDSRSSSYLIQWQDVDVPREFGDLTPSNSQILYA
Sbjct: 361 AIGHVKKQPGSHPDSRSSSYLIQWQDVDVPREFGDLTPSNSQILYA 406
>Os06g0655500 Cyclin-like F-box domain containing protein
Length = 384
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 173/367 (47%), Gaps = 26/367 (7%)
Query: 53 LIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLA-DKARF-FMQRKVMGFRSPLLFT 110
LIPGLP++ A CLL LP H R V W+ L A+F + P LF
Sbjct: 31 LIPGLPEEVAEKCLLHLPFLYHRLFRTVSSTWNRFLTVSPAKFPSAAAASVSLSLPFLFA 90
Query: 111 LAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSDM 170
AF + ++Q + LD W +P +P A V +P G + V GG+V
Sbjct: 91 FAFDPASRRLQCQALDPFSRRWLLLPPVPGGAAAAGSFA-VVGLPRRGEIYVIGGVVEGG 149
Query: 171 DCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLDP 230
D + V Y +N W M AR + A G + GR+ VAG E AEV DP
Sbjct: 150 DKAVRSVAVYSAARNGWEEAAGMGTARGYMAAGEVGGRLVVAG-------EDGEAEVFDP 202
Query: 231 VKGVWQPVASMGMNMASSDSAVISG-RLYVTEGCAWPFFSSPRGQVYDPKIDRWEVMPVG 289
+G W P A+ + A SG +LYVTEG AWPF +PRG VYD D W M G
Sbjct: 203 EEGRWAPAAARRGAAVARYDAAASGGKLYVTEGWAWPFERAPRGAVYDAASDSWSEMARG 262
Query: 290 MREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPERIMKPFSVSCL-- 347
MREGWTG V +++++EY ++K YD D W V G +P + +P VS
Sbjct: 263 MREGWTGSCAVAGGRMYIVAEYGEWRLKRYDEPRDEWRMVAGSGVPPEVRRPHVVSGEVE 322
Query: 348 ------ENKIVVVGRGLHVAIGHVKKQPGSH--PDSRSSSYLIQWQDVDVPREFGDLTPS 399
+I VVG GL VAIG V P H D R + W+ V P EF L P
Sbjct: 323 EVGSGGRRRIYVVGAGLDVAIGTVSPSPAIHGGDDER-----VDWEVVKGPAEFAGLAPC 377
Query: 400 NSQILYA 406
N+Q+LYA
Sbjct: 378 NAQVLYA 384
>Os10g0409900 Cyclin-like F-box domain containing protein
Length = 442
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 12/326 (3%)
Query: 41 ASDLEQASWETPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKV 100
S E++ + PL+PGLPDD A+ CL+R+P H R+VC+RW+ LL+ ++ RK
Sbjct: 70 GSRKERSRTQAPLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNY-YYSLRKR 128
Query: 101 MGFRSPLLFTLAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTL 160
G ++ R GKI W D + W ++P +P + + GFGC + G
Sbjct: 129 NGMAEEWVYVFKRDR-EGKISWHAFDPLHQLWKSLPPVPA-EYSEALGFGCAVL--SGCY 184
Query: 161 LVCGGLVSDMDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTD-Q 219
L G + + V+ Y+ N+W ML R FF VI+ +YVAGG Q
Sbjct: 185 LYLFGGKDPLRGSMRRVVFYNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQ 244
Query: 220 FELNSAEVLDPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPK 279
L SAEV DP + W VA M M V G+ ++ + +S +VY P
Sbjct: 245 RTLPSAEVYDPNRNRWACVAEMNNGMVPFIGVVYDGKWFLKGLDSHRQVTS---EVYLPS 301
Query: 280 IDRWEVMPVGMREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSWDSV---KGPPMPE 336
+ W + M GW S+ + L+ + K++VYDP T +W K
Sbjct: 302 SNLWSTIDDEMVTGWRNPSITFNGKLYSSDCRDGCKLRVYDPNTGTWAKFMDSKHHLGSS 361
Query: 337 RIMKPFSVSCLENKIVVVGRGLHVAI 362
R + ++ L K+ +V + + +
Sbjct: 362 RAFEAAALVTLNGKLCIVRNNMSITL 387
>Os03g0167800 Cyclin-like F-box domain containing protein
Length = 438
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 147/336 (43%), Gaps = 18/336 (5%)
Query: 41 ASDLEQASWETPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKV 100
+S E+ + PL+PGLPDD A+ CL+R+P H RLVC+RW+ LL+ ++ RK
Sbjct: 66 SSHKERCRTQAPLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWNRLLSGNY-YYSLRKK 124
Query: 101 MGFRSPLLFTLAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTL 160
+G +F R KI W D + W ++P +P + + GFGC + G
Sbjct: 125 LGMAEEWVFVFKRDR-DRKISWHAFDPVHQVWKSLPPVPA-EYSEAVGFGCAVL--SGCY 180
Query: 161 LVCGGLVSDMDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTD-Q 219
L G + + V+ Y+ N+W ML R F VI+ R+YVAGG Q
Sbjct: 181 LYLFGGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQ 240
Query: 220 FELNSAEVLDPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSSPR---GQVY 276
L SAE DP + W ++ M M V G+ ++ S R +VY
Sbjct: 241 RTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWFLKG------LDSHRQVVSEVY 294
Query: 277 DPKIDRWEVMPVGMREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPM-- 334
P + W V M GW S+ + L+ + K++VYD +T SW
Sbjct: 295 MPTSNVWSVTADEMVTGWRNPSICFNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHL 354
Query: 335 -PERIMKPFSVSCLENKIVVVGRGLHVAIGHVKKQP 369
R + ++ L KI ++ + + + V P
Sbjct: 355 GNSRAFEAAALVSLNGKICIIRNNMSITLVDVSNTP 390
>Os10g0363600 Cyclin-like F-box domain containing protein
Length = 475
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 145/346 (41%), Gaps = 73/346 (21%)
Query: 53 LIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLA 112
LIPGLPD+ +L L R+P + ++V R W + + RK +G L+ L
Sbjct: 45 LIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITG-VELYRVRKELGVSEEWLYMLT 103
Query: 113 FHRCTGKIQWKVLDLNYLTWHTIPAMP--CRDRACPRGF--------------------- 149
GK+ W D W +P MP C RG
Sbjct: 104 -KSDDGKLVWNAFDPVCGQWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRG 162
Query: 150 --------------GCVAIPSDGTLLVCGGLV--SDMDCPLHLVLKYDVYKNRWTVMTRM 193
GC +G + V GG S M C V +YD + N W ++ M
Sbjct: 163 WLGQRDSLDRLPFCGCAIGTVNGCIYVLGGFSRGSAMKC----VWRYDPFVNAWQEVSSM 218
Query: 194 LAARSFFAGGVIDGRVYVAGGYSTDQ---FELNSAEVLDPVKGVWQPVASMGMNMA---- 246
R+F +++ ++YV GG S + L SAEV DP G+W V + + A
Sbjct: 219 STGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALP 278
Query: 247 -----------SSDSAVISGRLYVTEGC-AWPFFSSPRGQVYDPKIDRWEVMPVGMREGW 294
++ G+LYV + +WPFF G+++DP+ + W MPVGM EGW
Sbjct: 279 TAFLAELLKPIATGMTSFGGKLYVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGW 338
Query: 295 ------TGLSVVIDKHLFVI---SEYERMKVKVYDPETDSWDSVKG 331
T LS VID L+ + + +R K+K+YDP+ D+W G
Sbjct: 339 PARQAGTKLSAVIDGDLYALEPSTSSDRGKIKIYDPQEDAWKVAIG 384
>Os02g0202900 Cyclin-like F-box domain containing protein
Length = 436
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 125/284 (44%), Gaps = 15/284 (5%)
Query: 50 ETPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLF 109
+ PLIPGLPDD A+ CL+R+P H RLVCRRW LLA F+ R+ +G ++
Sbjct: 73 QCPLIPGLPDDLAVACLIRVPRGDHWKLRLVCRRWSRLLAGNY-FYGLRRRLGLAEQWVY 131
Query: 110 TLAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSD 169
+ G++ W VLD L W +P +P + A GFGC + G L G
Sbjct: 132 AVK-RDGEGRVSWDVLDPARLAWRALPPVPG-EYAGAAGFGCAVL--GGCHLYLLGGSDP 187
Query: 170 MDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVA-----GGYSTDQFELNS 224
P+ V+ Y NRW ML R F V+ R+YVA G L S
Sbjct: 188 RRGPMRRVVFYSARSNRWHRAPDMLRRRHGFGCCVMGNRLYVAGGEGCGVGGGGGGGLRS 247
Query: 225 AEVLDPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDRWE 284
EV DP K W V+ M ++ SAV GR YV A S QVY P+ D W
Sbjct: 248 VEVFDPAKNRWSFVSDMAASLMPFVSAVHGGRWYVKGLGAQRQVMS---QVYSPEADAWS 304
Query: 285 VMPV--GMREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSW 326
M GW S + L+ + +++ YD +W
Sbjct: 305 AAHELDAMVTGWRSPSASLGGRLYAADCKDGCRLRAYDEAAGAW 348
>Os04g0380300 Cyclin-like F-box domain containing protein
Length = 375
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 135/304 (44%), Gaps = 12/304 (3%)
Query: 53 LIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLA 112
LIPGLP+D A CL +P V + W + K F RK +G ++ L
Sbjct: 38 LIPGLPEDLAKVCLALVPRSYFPVMGAVSKSWMSFIGSK-EFIAVRKEVGRLEERIYALI 96
Query: 113 FHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSDM-- 170
W+VL +P MP +A GF V + DG LLV G D
Sbjct: 97 TGDGGKGPYWEVLGSLEQQNRMLPPMPGLTKA---GFSVVVL--DGKLLVMAGYGVDYGK 151
Query: 171 DCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLDP 230
+C V +YD NRW + +M AR FA ++G VYVAGG+ +D L+S EV DP
Sbjct: 152 ECVSDEVYQYDARLNRWAALAKMNVARRDFACAEVNGAVYVAGGFGSDGDGLSSVEVYDP 211
Query: 231 VKGVWQPVASMGMNMASSDSAVISGRLYVTEG-CAWPFFSSPRGQVYDPKIDRWEVMPVG 289
+ W + S+ S + +G+LY+ G ++ +S VYDP + W + G
Sbjct: 212 QRNKWTIIESLRRPRWGSFACSFNGKLYIMGGRSSFTIGNSRFIDVYDPILHSWTEIKKG 271
Query: 290 MREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPERIMKPFSVSCLEN 349
VI+K LF I + + +++P SW + P+ FS+ L+
Sbjct: 272 CV--MVTSHAVINKRLFCIEWKNQRSLAIFNPSDSSWQKIP-VPLTGSSATLFSLGVLDG 328
Query: 350 KIVV 353
K+++
Sbjct: 329 KLLL 332
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 137/320 (42%), Gaps = 11/320 (3%)
Query: 16 LGDSQMKLTPKFRLATTSALPSSMPASDLEQASWETPLIPGLPDDAALNCLLRLPVETHE 75
SQ +L +L + S + ++ LIPGLP+D A CL +P
Sbjct: 11 FAQSQAQLCAGMQLKAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKICLALVPRSQFP 70
Query: 76 ACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLAFHRCTGKIQWKVLDLNYLTWHTI 135
V +RW L K F RK +G ++ L + W+VL + +
Sbjct: 71 VMGSVSKRWMSFLESK-EFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPL 129
Query: 136 PAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSD--MDCPLHLVLKYDVYKNRWTVMTRM 193
P MP +A GFG V + DG L V G +D +C V +YD NRW +++M
Sbjct: 130 PPMPGPTKA---GFGVVVL--DGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVELSKM 184
Query: 194 LAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLDPVKGVWQPVASMGMNMASSDSAVI 253
AR FA ++G +YVAGG+ + L+S EV D + W + S+ +
Sbjct: 185 NVARCDFACAEVNGMIYVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSF 244
Query: 254 SGRLYVTEGCAWPFFSSPRG-QVYDPKIDRWEVMPVGMREGWTGLSVVIDKHLFVISEYE 312
G+LYV G + + R VY+P + W + G V+DK LF I
Sbjct: 245 EGKLYVMGGRSRFTIGNTRFVDVYNPNDNSWGEVKNGCV--MVTAHAVLDKKLFCIEWKN 302
Query: 313 RMKVKVYDPETDSWDSVKGP 332
+ + V++P +SW V P
Sbjct: 303 QRSLAVFNPADNSWQKVPVP 322
>Os02g0574900 Cyclin-like F-box domain containing protein
Length = 460
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 175/423 (41%), Gaps = 77/423 (18%)
Query: 53 LIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLA 112
+IP LPD+ + L RLP + +LV + W + + R+ +G L+ L
Sbjct: 42 IIPTLPDELSFQILARLPRLYYLKLKLVSQAWKAAITS-SELSQLRRELGLTEEWLYVLT 100
Query: 113 FHRCTGKIQWKVLDLNYLTWHTIPAMPC--------------------------RDRACP 146
K+ LD + W +P MP R
Sbjct: 101 -KLEPNKLDCYALDPLFRKWQRLPPMPSFVSEEESTGRTQSSWFQTWNVVGSSIRIADFI 159
Query: 147 RGF-------------GCVAIPSDGTLLVCGGLVSDMDCPLHLVLKYDVYKNRWTVMTRM 193
+G+ GC +DG L V GG L+ V +Y+ N W ++ M
Sbjct: 160 KGWFRRRYGLDQMPFCGCSVGVADGCLYVFGGF--SRAVALNCVFRYNPCLNVWQEVSPM 217
Query: 194 LAARSFFAGGVIDGRVYVAGGYSTDQ---FELNSAEVLDPVKGVWQPVASMGMNMA---- 246
++ R+F ++ ++YV GG S + L S EV DP G+W + M A
Sbjct: 218 ISGRAFSKAALLQSKLYVVGGVSRGRNGLLPLRSGEVFDPKTGIWSELPEMPFMKAQVLP 277
Query: 247 -----------SSDSAVISGRLYVTEGC-AWPFFSSPRGQVYDPKIDRWEVMPVGMREGW 294
++ A G+LYV + +WPFF G++YDP+++ WE M G+ +GW
Sbjct: 278 TAFLADVLKPIATGMASYKGKLYVPQSLYSWPFFFDIGGEIYDPELNSWETMADGLGDGW 337
Query: 295 ------TGLSVVIDKHLFVI---SEYERMKVKVYDPETDSWDSVKGPPMP----ERIMKP 341
T L +V+++ L+ + S + ++K YD E D+W ++ P +P P
Sbjct: 338 PARQAGTKLGIVVNEELYTLEPSSSLDSGQIKRYDSEQDTWKTIV-PQVPVHDFTDAEAP 396
Query: 342 FSVSCLENKIVVVGRGLHVAIGHVKKQPGSHPDSRSSSYLIQWQDVDVPREFGDLTPSNS 401
F ++ L K+ V+ + + + ++ ++ ++ S I W ++ + FG +
Sbjct: 397 FLLAGLHGKVHVITKEANNNLQVMQAVLQNNIENSPSEENIIW-NILASKNFGSAELVSC 455
Query: 402 QIL 404
Q+L
Sbjct: 456 QVL 458
>Os02g0114600 Cyclin-like F-box domain containing protein
Length = 360
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 137/324 (42%), Gaps = 13/324 (4%)
Query: 39 MPASDLEQASWETPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQR 98
+ S ++ T LI GLPD+ A+ CL R+P H A R V +RW LL+ + + R
Sbjct: 11 LSCSGMDSDGPHTSLIHGLPDEIAILCLARVPRRYHNALRCVSKRWRALLSSE-EWHSCR 69
Query: 99 KVMGFRSPLLFTLAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDG 158
K P ++ + R TG I+ VL + T ++ M + C G D
Sbjct: 70 KRNNLDEPWVYVIC--RSTG-IKCYVLAPDPTT-RSLKIMQVIEPPCSSREGISIETLDK 125
Query: 159 TLLVCGGLVSDMDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTD 218
L + GG D V YD N W+ + M AR +F +D ++Y+ GG
Sbjct: 126 RLFLLGGCSWLKDANDE-VFCYDASSNCWSSVAPMPTARCYFVSAALDKKLYITGGLGLT 184
Query: 219 QFELNSAEVLDPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWP--FFSSPRGQVY 276
NS ++ DPV W + + + G L AW +F+ +Y
Sbjct: 185 DKSPNSWDIYDPVTNSWCVHKNPMLTPDIVKFVALDGELVTVHKAAWNRMYFAG----IY 240
Query: 277 DPKIDRWEVMPVGMREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPE 336
DP W + W+G +VV+D L+++ + K+ ++ ET W + G +
Sbjct: 241 DPLCRTWRGTENEIALCWSGSTVVMDGTLYMLEQSLGTKLMMWQKETKEWIML-GRLSDK 299
Query: 337 RIMKPFSVSCLENKIVVVGRGLHV 360
P + + KI ++GRGL +
Sbjct: 300 LTRPPCELVGIGRKIYIIGRGLSI 323
>Os03g0171600 Cyclin-like F-box domain containing protein
Length = 431
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 144/344 (41%), Gaps = 35/344 (10%)
Query: 45 EQASWETPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFR 104
E+ + LI + D +NCLLRL + + + + + L+ + + ++R+
Sbjct: 87 EEHGNGSSLIGAIGRDLTINCLLRLSRSDYGSVASLNKDFRSLVRNGEIYRLRRQ----- 141
Query: 105 SPLLFTLAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCG 164
S + + C ++W D W +P MP + C F C SD L G
Sbjct: 142 SGVAEHWVYFSCN-VLEWDAYDPYRERWIQVPKMPPDE--C---FMC----SDKESLAVG 191
Query: 165 G--LVSDMDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFEL 222
LV M H+V +Y + N WT M++ R F + + YVAGG + L
Sbjct: 192 TELLVFAM---AHIVFRYSILTNSWTRADPMISPRCLFGSTSVGAKAYVAGGTDSSGRIL 248
Query: 223 NSAEVLDPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDR 282
+SAE+ D W P+ SM + G+ YV G A G+ YD K
Sbjct: 249 SSAEMYDSETHSWTPLPSMNRARKMCSGVFMDGKFYVVGGVASNNKVLTCGEEYDLKRRS 308
Query: 283 WEVMPVGMREGWTGLS------VVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPE 336
W V+ M EG G++ V++ L+ ++Y VK YD + + W ++ +PE
Sbjct: 309 WRVIE-NMSEGLNGVTGAPPLIAVVNNELYA-ADYSEKDVKKYDKQNNKWITLG--KLPE 364
Query: 337 RIMK----PFSVSCLENKIVVVGRGLHVAIGHVKKQPGSHPDSR 376
R + + ++++V+G G +IG + PD R
Sbjct: 365 RSVSMNGWGLAFRACGDRLIVIG-GPRTSIGGTIELNSWTPDER 407
>Os10g0388200 Cyclin-like F-box domain containing protein
Length = 347
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 51 TPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFT 110
+ LI GLP++ AL CL R+P +H ++VC W + + R + LL
Sbjct: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRN-GELSKVRNQISATEDLLCV 61
Query: 111 LAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSDM 170
LAF + W++ D W T+P MP + R R FG ++ G L V GG +
Sbjct: 62 LAFEP---ENMWQLYDPLRDKWITLPVMPSQIRNIAR-FGVASVA--GKLYVIGGGSDRV 115
Query: 171 DCPL----------HLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQF 220
D PL + V YD W ML AR+ FA +DG + VAGG++ +
Sbjct: 116 D-PLTGDHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRK 174
Query: 221 ELNSAEVLDPVKGVWQPVASMGMNMASSDSA-VISGRLYV 259
++ AE+ +P W+P+ + +S+ S VI G+++V
Sbjct: 175 SISKAEIYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHV 214
>Os02g0748300 Similar to VMP3 protein
Length = 426
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 27/295 (9%)
Query: 51 TPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFT 110
+ LI + D +++CL R + + V R +H L+ + +R+ +G ++
Sbjct: 85 STLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRS-GELYKERRQLGIAEHWVY- 142
Query: 111 LAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGG--LVS 168
C + +W+ D W T+P MP + C F C SD L G LV
Sbjct: 143 ---FSCNVQ-EWEAYDPYRSRWMTLPKMPHNE--C---FMC----SDKESLAVGTELLVF 189
Query: 169 DMDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVL 228
+ H+VL Y + N W+ M A R F + VAGG L SAE+
Sbjct: 190 GKEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAELY 249
Query: 229 DPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDRWEVMPV 288
+ W + M ++G+ YV G A G+ YD + W V+
Sbjct: 250 NSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVIE- 308
Query: 289 GMREGWTGLS------VVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPER 337
M EG G S V++ L+ ++Y V+ Y+ + ++W ++ +PER
Sbjct: 309 NMSEGLNGASGAPPLVAVVENELYA-AQYAGKLVRKYNIKDNTWTTLG--ELPER 360
>Os11g0602800 Galactose oxidase, central domain containing protein
Length = 432
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 31/336 (9%)
Query: 32 TSALPSSMPASDLEQASWETPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADK 91
T S M +D + + LI + + A+ CLL P + + R + L+
Sbjct: 72 TGVWDSEMQDADQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSG 131
Query: 92 ARFFMQRKVMGFRSPLLFTLAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGC 151
+ ++R+ + ++ + + C ++W D W IP+MP + C
Sbjct: 132 QLYRLRRE-----ARIVEHMIYCSCN-VLEWDGFDPCRQRWFNIPSMPPIE--------C 177
Query: 152 VAIPSDGTLLVCGG-LVSDMDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVY 210
+ +L V LV H+VL+Y + N WT M + R F +
Sbjct: 178 FTLADKESLAVGTNILVFGKKVEAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAI 237
Query: 211 VAGGYSTDQFELNSAEVLDPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSS 270
VAGG D L+SAE+ D W + SM + G+ YV G A
Sbjct: 238 VAGGIG-DNGTLSSAELYDSEAKTWTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEI 296
Query: 271 PR-GQVYDPKIDRWEVMPVGMREGWTG------LSVVIDKHLFVISEYERMKVKVYDPET 323
G+ +D + W ++P M G G L V++ L+ ++Y +V+ YD
Sbjct: 297 LNCGEEFDLEKGTWRLIP-DMASGLNGGSGAPPLVAVVNNELYA-ADYAEKEVRRYDKVN 354
Query: 324 DSWDSVKGPPMPERIMK----PFSVSCLENKIVVVG 355
++W ++ +PE+ + +K++V+G
Sbjct: 355 NAWITLG--SLPEKYTSVNGWGLAFRGCGDKLIVIG 388
>Os04g0619300 Cyclin-like F-box domain containing protein
Length = 455
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 27/293 (9%)
Query: 53 LIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLA 112
PGL DD A +CL + + + ++++ L+ + ++RK ++
Sbjct: 113 FFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKY-----GIVEHWV 167
Query: 113 FHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCV---AIPSDGTLLVCGGLVSD 169
+ C+ + W+ D + W +P MPC + F C ++ LLV G +
Sbjct: 168 YLACS-LMPWEAFDPSRKRWMRLPRMPCDE-----CFSCADKESLAVGTQLLVFGREYTG 221
Query: 170 MDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLD 229
+ + Y++ W+ T M R FA G VAGG + L SAE+ +
Sbjct: 222 L-----AIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYN 276
Query: 230 PVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDRW----EV 285
G W+ + M + S + G+ YV G + S G+ Y+ + W ++
Sbjct: 277 SETGHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDM 336
Query: 286 MPVGMREGWT-GLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPER 337
P G + L V++ L+ + + VK YD ++W+ VK P+P R
Sbjct: 337 YPGGTSASQSPPLVAVVNNQLYAADQATNV-VKKYDKGNNTWNIVK--PLPVR 386
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,643,734
Number of extensions: 697582
Number of successful extensions: 1869
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1807
Number of HSP's successfully gapped: 16
Length of query: 406
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 303
Effective length of database: 11,657,759
Effective search space: 3532300977
Effective search space used: 3532300977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)