Os06g0655500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os06g0655500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.58 | 0.507 | 10.2 | 0.816 | 0.955 | -3.2 | 1.29 | -0.243 | -0.33 | 14.5 | 1.335 | 735 | -- | -- |
| 116.6 | 0.503 | 10.2 | 0.816 | 0.897 | -3.12 | 1.18 | -- | -0.336 | 14.3 | 1.33 | 738 | -- | -- |
| 120.64 | 0.512 | 10.2 | 0.868 | 0.879 | -3.11 | -- | 0.841 | -0.32 | 14.3 | 1.35 | 740 | -- | -- |
| 121.5 | 0.513 | 10.2 | 0.844 | 0.771 | -2.94 | -- | -- | -0.336 | 13.7 | 1.35 | 747 | -- | -- |
| 127.54 | 0.526 | 10.2 | 0.902 | -- | -2.82 | -- | 1.16 | -0.311 | -- | 1.549 | 879 | -- | -- |
| 138.3 | 0.551 | 10.2 | 0.668 | 2.02 | -- | 0.114 | -- | -0.443 | 7.27 | -- | -- | -- | -- |
| 138.33 | 0.551 | 10.2 | 0.67 | 2.02 | -- | -- | -- | -0.443 | 7.27 | -- | -- | -- | -- |
| 126.84 | 0.525 | 10.2 | 0.87 | -- | -2.89 | -- | -- | -0.313 | -- | 1.35 | 890 | -- | -- |
| 139.5 | 0.55 | 10.2 | -- | 0.742 | -2.7 | -- | -- | -0.444 | 12.8 | 1.58 | 740 | -- | -- |
| 353.76 | 0.879 | 10.2 | 0.705 | -- | -- | -- | -- | -0.409 | -- | -- | -- | -- | -- |
| 150.15 | 0.573 | 10.2 | -- | 2.02 | -- | -- | -- | -0.518 | 7.24 | -- | -- | -- | -- |
| 146.2 | 0.563 | 10.2 | -- | -- | -2.86 | -- | -- | -0.414 | -- | 1.577 | 881 | -- | -- |
| 366.88 | 0.894 | 10.2 | -- | -- | -- | -- | -- | -0.487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.14 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 3 | 105.35 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 18 | 107.73 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 14 |
| 19 | 107.90 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 34 | 108.55 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 14 |
| 35 | 108.65 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 6 |
| 39 | 108.83 | radiation | 1.0 | 720 | > th | dose independent | sin | 14 | NA |
| 41 | 108.98 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 5 |
| 77 | 110.45 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 7 |
| 78 | 110.48 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 83 | 110.55 | radiation | 1.0 | 720 | < th | dose independent | sin | 15 | NA |
| 106 | 111.23 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 9 |
| 111 | 111.39 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 13 |
| 128 | 111.63 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 13 | 15 |
| 129 | 111.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 130 | 111.67 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 153 | 112.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 14 |
| 154 | 112.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 162 | 112.43 | radiation | 10.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 165 | 112.45 | wind | 5.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 167 | 112.47 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 169 | 112.54 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 22 |
| 171 | 112.56 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 14 |
| 177 | 112.66 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 204 | 112.92 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 6 |
| 205 | 112.94 | radiation | 1.0 | 720 | > th | dose independent | sin | 22 | NA |
| 257 | 113.66 | radiation | 10.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 262 | 113.69 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 273 | 113.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 23 |
| 274 | 113.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 282 | 113.92 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 310 | 114.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 311 | 114.13 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 331 | 114.35 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 4 |
| 335 | 114.38 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 375 | 114.65 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 378 | 114.70 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 4 |
| 402 | 114.84 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 419 | 114.95 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 435 | 115.05 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 437 | 115.06 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 461 | 115.13 | temperature | 25.0 | 720 | < th | dose independent | sin | 16 | NA |
| 493 | 115.27 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 501 | 115.33 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 515 | 115.42 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 566 | 115.60 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 607 | 115.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 5 |
| 608 | 115.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 613 | 115.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 21 |
| 614 | 115.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 21 |
| 621 | 116.05 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 623 | 116.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 19 |
| 624 | 116.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 19 |
| 626 | 116.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 627 | 116.08 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 1 | 4 |
| 655 | 116.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 656 | 116.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 657 | 116.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 660 | 116.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 661 | 116.22 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 666 | 116.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 667 | 116.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 668 | 116.22 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 681 | 116.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 14 |
| 691 | 116.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 693 | 116.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 694 | 116.31 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 695 | 116.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 14 |
| 708 | 116.35 | wind | 3.0 | 720 | > th | dose independent | rect. | 15 | 2 |
| 712 | 116.36 | temperature | 25.0 | 720 | > th | dose independent | sin | 16 | NA |
| 721 | 116.40 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 18 |
| 742 | 116.51 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 747 | 116.52 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 10 |
| 749 | 116.52 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 762 | 116.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 5 |
| 765 | 116.58 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 18 |
| 805 | 116.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 812 | 116.75 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 830 | 116.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 833 | 116.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 5 |
| 840 | 116.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 5 |
| 841 | 116.90 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 5 |
| 846 | 116.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 19 |
| 890 | 117.05 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 897 | 117.07 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 1 |
| 903 | 117.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 5 |
| 956 | 117.20 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 964 | 117.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 19 |
| 992 | 117.36 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 1000 | 117.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 5 |