Os02g0202900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0202900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.39 | 0.468 | 8.76 | 1.68 | 0.283 | -1.15 | -0.053 | 0.198 | 0.713 | 3.1 | 0.1881 | 59 | -- | -- |
| 99.5 | 0.465 | 8.76 | 1.68 | 0.3 | -1.17 | 0.161 | -- | 0.714 | 2.79 | 0.1802 | 58 | -- | -- |
| 99.37 | 0.464 | 8.76 | 1.68 | 0.288 | -1.15 | -- | 0.168 | 0.713 | 3.09 | 0.18 | 59 | -- | -- |
| 99.45 | 0.464 | 8.75 | 1.69 | 0.296 | -1.16 | -- | -- | 0.719 | 3.08 | 0.18 | 61 | -- | -- |
| 101.71 | 0.47 | 8.75 | 1.71 | -- | -0.997 | -- | 0.182 | 0.738 | -- | 0.3 | 51 | -- | -- |
| 123.9 | 0.522 | 8.72 | 1.78 | 1.15 | -- | -0.215 | -- | 0.761 | 11.5 | -- | -- | -- | -- |
| 124.1 | 0.522 | 8.72 | 1.77 | 1.15 | -- | -- | -- | 0.76 | 11.5 | -- | -- | -- | -- |
| 101.91 | 0.47 | 8.75 | 1.71 | -- | -1 | -- | -- | 0.735 | -- | 0.3 | 51 | -- | -- |
| 172.35 | 0.611 | 8.78 | -- | 0.502 | -1.35 | -- | -- | 0.527 | 2.08 | 9.634e-06 | 58 | -- | -- |
| 207.74 | 0.673 | 8.75 | 1.74 | -- | -- | -- | -- | 0.748 | -- | -- | -- | -- | -- |
| 207.13 | 0.673 | 8.77 | -- | 1.14 | -- | -- | -- | 0.563 | 11.4 | -- | -- | -- | -- |
| 177.8 | 0.621 | 8.75 | -- | -- | -1.01 | -- | -- | 0.63 | -- | 0.05 | 38 | -- | -- |
| 287.97 | 0.792 | 8.79 | -- | -- | -- | -- | -- | 0.555 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.52 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 3 | 94.21 | radiation | 1.0 | 90 | > th | dose independent | sin | 13 | NA |
| 4 | 94.24 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 8 | 95.22 | radiation | 1.0 | 90 | > th | dose independent | rect. | 14 | 17 |
| 28 | 97.78 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 14 |
| 30 | 97.86 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 16 | 13 |
| 34 | 98.04 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 47 | 98.68 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 12 |
| 52 | 98.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 11 |
| 55 | 99.07 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 81 | 99.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 102 | 99.99 | humidity | 70.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 128 | 100.34 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 130 | 100.39 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 137 | 100.51 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 14 |
| 142 | 100.59 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 151 | 100.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 157 | 100.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 160 | 100.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 172 | 101.01 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 190 | 101.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 18 |
| 194 | 101.28 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 215 | 101.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 227 | 101.60 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 228 | 101.64 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 230 | 101.67 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 244 | 101.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 258 | 101.89 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 11 |
| 284 | 102.12 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 11 |
| 287 | 102.15 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 14 |
| 289 | 102.15 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 14 |
| 298 | 102.24 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 13 |
| 327 | 102.42 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 11 |
| 328 | 102.43 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 341 | 102.43 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 348 | 102.48 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 351 | 102.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 353 | 102.50 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 355 | 102.50 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 362 | 102.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 364 | 102.50 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 14 |
| 410 | 102.72 | wind | 9.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 419 | 102.78 | radiation | 10.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 441 | 102.88 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 457 | 102.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 461 | 102.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 462 | 102.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 470 | 102.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 471 | 102.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 474 | 102.99 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 6 |
| 479 | 103.00 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 14 | 18 |
| 481 | 103.00 | radiation | 1.0 | 90 | < th | dose dependent | no | NA | NA |
| 483 | 103.00 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 14 | 18 |
| 484 | 103.00 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 489 | 103.01 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 491 | 103.02 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 499 | 103.05 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 500 | 103.05 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 13 |
| 507 | 103.09 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 633 | 103.46 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 669 | 103.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 675 | 103.61 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 14 |
| 703 | 103.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 739 | 103.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 740 | 103.82 | radiation | 20.0 | 30 | < th | dose independent | rect. | 20 | 23 |
| 752 | 103.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 755 | 103.91 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 778 | 103.98 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 18 |
| 780 | 103.98 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 799 | 104.07 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 841 | 104.18 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 842 | 104.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 863 | 104.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 5 |
| 865 | 104.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 870 | 104.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 871 | 104.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 885 | 104.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 10 |
| 886 | 104.28 | temperature | 15.0 | 90 | > th | dose independent | rect. | 14 | 18 |
| 889 | 104.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 894 | 104.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
| 896 | 104.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 925 | 104.35 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 14 | 18 |
| 934 | 104.37 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 962 | 104.47 | radiation | 30.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 971 | 104.52 | radiation | 30.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 991 | 104.55 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 18 |