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Os02g0316200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0234) R2 : 0.731
β1 : 1.17 (0.0859) R2dD : 0.114 R2D : 0.0651
β2 : 1.79 (0.0584) R2dC : 0.553 R2C : 0.553
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.564 (0.0501) R2dN8 : 0.1 R2N8 : 0.0523
σ : 0.441
deviance : 88.62
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_____
C
peak time of C : 3.15
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.45 0.411 11.3 1.83 1.84 -5.52 -0.437 14.1 0.493 3.09 49.7 3981 -- --
88.36 0.441 11.5 1.17 1.79 -0.0267 -0.285 -- 0.562 3.16 49.7 3981 -- --
77 0.409 11.3 1.81 1.84 -5.48 -- 14 0.5 3.06 49.54 3935 -- --
81.9 0.422 11.5 1.3 1.79 -0.49 -- -- 0.55 3.2 77.18 1475 -- --
264.65 0.758 11.3 1.67 -- -5.33 -- 14.1 0.606 -- 48 3964 -- --
88.36 0.441 11.5 1.17 1.79 -- -0.281 -- 0.562 3.16 -- -- -- --
88.62 0.441 11.5 1.17 1.79 -- -- -- 0.564 3.15 -- -- -- --
130.69 0.532 11.5 1.22 -- -2.29 -- -- 0.625 -- 132.4 5 -- --
109.57 0.488 11.5 -- 1.8 -0.814 -- -- 0.384 3.16 74.83 47520 -- --
270.59 0.769 11.5 1.25 -- -- -- -- 0.61 -- -- -- -- --
124.86 0.523 11.5 -- 1.81 -- -- -- 0.433 3.15 -- -- -- --
169.81 0.607 11.5 -- -- -2.33 -- -- 0.49 -- 177.3 2 -- --
311.72 0.824 11.5 -- -- -- -- -- 0.472 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.03 humidity 50 4320 < th dose independent rect. 14 2
2 75.10 humidity 50 4320 > th dose independent rect. 14 2
3 75.21 humidity 90 1440 < th dose dependent rect. 10 1
5 75.41 humidity 50 1440 > th dose dependent rect. 10 1
8 75.61 humidity 70 1440 < th dose dependent rect. 18 17
9 75.63 humidity 50 4320 < th dose independent rect. 11 5
28 75.65 humidity 50 4320 < th dose dependent rect. 15 1
32 75.76 humidity 70 1440 < th dose independent rect. 18 17
33 75.77 humidity 50 1440 > th dose independent rect. 17 22
35 75.81 radiation 40 1440 < th dose independent rect. 15 19
38 75.90 radiation 40 30 < th dose dependent rect. 23 23
42 75.96 radiation 30 1440 > th dose independent rect. 16 16
43 76.01 humidity 50 4320 > th dose independent rect. 17 17
44 76.05 radiation 40 1440 > th dose independent rect. 15 19
45 76.06 radiation 30 1440 > th dose dependent rect. 15 19
47 76.09 radiation 40 1440 > th dose independent rect. 8 2
66 76.15 radiation 40 1440 < th dose independent rect. 4 6
76 76.24 radiation 40 1440 < th dose independent rect. 18 16
78 76.25 radiation 10 720 > th dose independent sin 14 NA
80 76.26 temperature 25 720 > th dose independent rect. 13 5
84 76.28 humidity 70 1440 < th dose dependent rect. 19 12
85 76.29 humidity 70 1440 > th dose independent rect. 19 16
89 76.32 radiation 30 1440 > th dose dependent rect. 7 3
105 76.33 radiation 40 1440 < th dose independent rect. 22 12
108 76.34 humidity 70 1440 > th dose independent rect. 18 18
111 76.36 humidity 60 720 > th dose independent rect. 17 20
114 76.41 humidity 50 4320 > th dose independent rect. 17 6
117 76.43 radiation 10 720 > th dose independent rect. 13 18
120 76.43 humidity 50 4320 < th dose dependent rect. 17 18
121 76.43 humidity 50 4320 < th dose dependent rect. 17 23
122 76.44 radiation 40 1440 < th dose independent sin 11 NA
126 76.44 radiation 1 10 > th dose dependent rect. 13 23
127 76.45 humidity 50 4320 > th dose independent rect. 17 4
133 76.47 humidity 50 4320 > th dose independent rect. 17 15
140 76.51 temperature 25 720 > th dose independent rect. 15 3
147 76.53 humidity 50 4320 < th dose independent rect. 16 18
159 76.59 humidity 70 720 > th dose independent rect. 1 19
162 76.60 humidity 70 720 > th dose independent rect. 8 21
163 76.60 humidity 50 4320 < th dose dependent rect. 17 1
196 76.61 humidity 70 1440 < th dose dependent rect. 19 1
207 76.62 radiation 1 720 < th dose independent rect. 23 23
209 76.63 radiation 30 1440 > th dose dependent rect. 9 1
212 76.64 humidity 50 4320 < th dose independent rect. 17 1
232 76.65 humidity 50 4320 > th dose independent rect. 17 2
271 76.69 radiation 10 720 > th dose independent rect. 15 16
279 76.73 radiation 10 720 > th dose independent rect. 15 2
280 76.74 radiation 10 720 > th dose independent rect. 13 4
281 76.74 radiation 30 1440 > th dose dependent sin 11 NA
282 76.75 humidity 70 720 > th dose independent rect. 1 21
287 76.77 humidity 70 1440 < th dose dependent rect. 18 14
290 76.78 temperature 10 720 > th dose dependent rect. 13 4
291 76.79 humidity 70 720 > th dose independent rect. 10 19
295 76.80 radiation 40 30 < th dose dependent rect. 1 23
302 76.83 radiation 1 720 < th dose independent rect. 1 19
303 76.83 radiation 1 720 < th dose independent rect. 7 22
307 76.85 humidity 70 720 > th dose independent rect. 23 23
308 76.85 radiation 40 10 < th dose dependent rect. 3 12
309 76.86 radiation 1 720 > th dose independent rect. 11 23
310 76.86 temperature 20 720 > th dose dependent rect. 13 3
349 76.93 humidity 70 1440 < th dose dependent sin 9 NA
353 76.96 humidity 50 1440 > th dose independent rect. 4 12
356 76.97 humidity 50 4320 < th dose dependent rect. 14 22
372 77.04 humidity 50 4320 < th dose dependent rect. 11 5
434 77.09 humidity 50 4320 < th dose dependent sin 2 NA
477 77.12 radiation 1 270 > th dose independent rect. 17 23
480 77.13 humidity 50 1440 > th dose independent rect. 11 5
505 77.14 radiation 30 90 < th dose dependent rect. 10 23
508 77.15 radiation 1 720 < th dose independent rect. 23 21
616 77.25 humidity 50 1440 > th dose independent rect. 9 7
623 77.27 humidity 50 1440 > th dose independent sin 6 NA
625 77.27 humidity 70 720 < th dose independent rect. 19 12
632 77.29 humidity 50 1440 > th dose independent rect. 22 18
664 77.31 humidity 70 720 > th dose independent rect. 13 23
669 77.32 radiation 1 720 < th dose independent rect. 15 21
677 77.33 temperature 20 720 > th dose dependent rect. 15 1
678 77.33 humidity 90 10 < th dose dependent rect. 7 12
718 77.35 radiation 20 720 < th dose dependent rect. 15 16
731 77.38 humidity 60 10 > th dose dependent sin 0 NA
732 77.38 humidity 50 4320 < th dose dependent no NA NA
887 77.39 radiation 40 1440 > th dose independent sin 11 NA
912 77.42 wind 1 4320 > th dose independent rect. 18 1
917 77.43 wind 1 4320 < th dose independent rect. 18 1
923 77.44 radiation 1 720 < th dose independent rect. 15 14
951 77.47 humidity 80 10 > th dose independent rect. 3 17
974 77.48 radiation 40 720 < th dose dependent sin 13 NA
998 77.50 humidity 70 720 > th dose independent rect. 15 23