BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0105600 Os02g0105600|Os02g0105600
(188 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0105600 Conserved hypothetical protein 385 e-108
Os02g0105800 Cyclin-like F-box domain containing protein 327 3e-90
Os04g0479800 Cyclin-like F-box domain containing protein 185 2e-47
Os04g0479500 Conserved hypothetical protein 179 1e-45
Os09g0506700 Cyclin-like F-box domain containing protein 168 2e-42
Os01g0774200 Conserved hypothetical protein 165 2e-41
Os08g0552900 Cyclin-like F-box domain containing protein 152 1e-37
Os03g0202500 Cyclin-like F-box domain containing protein 150 5e-37
Os05g0571700 Cyclin-like F-box domain containing protein 147 5e-36
Os09g0325220 Cyclin-like F-box domain containing protein 145 1e-35
Os03g0217200 Cyclin-like F-box domain containing protein 139 1e-33
Os05g0531800 137 4e-33
Os05g0532300 137 5e-33
Os06g0142100 Cyclin-like F-box domain containing protein 121 2e-28
Os06g0139000 Conserved hypothetical protein 121 3e-28
Os04g0626600 Conserved hypothetical protein 120 6e-28
Os11g0527300 Hypothetical protein 114 3e-26
Os04g0626700 Leucine-rich repeat 2 containing protein 107 4e-24
Os09g0562400 Similar to mutator-like transposase [Oryza sat... 106 8e-24
Os10g0384600 Cyclin-like F-box domain containing protein 105 3e-23
Os05g0538200 100 9e-22
Os05g0535300 Conserved hypothetical protein 79 2e-15
Os09g0506300 Cyclin-like F-box domain containing protein 78 4e-15
Os09g0502800 Conserved hypothetical protein 75 2e-14
>Os02g0105600 Conserved hypothetical protein
Length = 188
Score = 385 bits (990), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV
Sbjct: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
Query: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL
Sbjct: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
Query: 121 VLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCT 180
VLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCT
Sbjct: 121 VLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCT 180
Query: 181 RCHSLAFG 188
RCHSLAFG
Sbjct: 181 RCHSLAFG 188
>Os02g0105800 Cyclin-like F-box domain containing protein
Length = 527
Score = 327 bits (838), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/188 (87%), Positives = 172/188 (91%), Gaps = 1/188 (0%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
M L SDSEAVNIPMLPTKFL LKHLTIQIA GTFSPSYDYFFLVSF+ ASPSLETLYLDV
Sbjct: 341 MVLSSDSEAVNIPMLPTKFLCLKHLTIQIARGTFSPSYDYFFLVSFLHASPSLETLYLDV 400
Query: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
Q+DM HESI+E SS HLRQLPELSH+CLKSV+I+GFNSAKSLVELTC IVKAA SLERL
Sbjct: 401 FQEDMRHESIVEDSSAHLRQLPELSHECLKSVEIIGFNSAKSLVELTCCIVKAAASLERL 460
Query: 121 VLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCT 180
VLDTLRGG DRC GESNGKICWPVSNAVLKESARAAIAVRRYIEDKV+P TTLTLV CT
Sbjct: 461 VLDTLRGG-DRCSGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVAPTTTLTLVGTCT 519
Query: 181 RCHSLAFG 188
RCHSLAFG
Sbjct: 520 RCHSLAFG 527
>Os04g0479800 Cyclin-like F-box domain containing protein
Length = 518
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 121/180 (67%), Gaps = 6/180 (3%)
Query: 5 SDSEAVNIPMLPTKFLYLKHLTIQ-IAGGTFSPSYDYFFLVSFVDASPSLETLYLDVCQD 63
S E V+ PMLPTKFLYLKHLTI I G T S YDYF LVSF+DASPSLETL L+V Q
Sbjct: 339 SGHEVVDAPMLPTKFLYLKHLTIHVITGSTISQPYDYFSLVSFIDASPSLETLILNVTQV 398
Query: 64 DMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERLVLD 123
M HESI S LR +P H LKSVKI GF+SAKSLVELTC I+ AVSLE L LD
Sbjct: 399 RMVHESIFTDS--QLRHIPGHRHGHLKSVKITGFSSAKSLVELTCYILNNAVSLECLTLD 456
Query: 124 TLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCTRCH 183
T+ G C + + C+P+ + VL ++ R A+R YIEDKV LT++EPC+RCH
Sbjct: 457 TIYGPR---CDQDKYRRCFPMIDGVLTDAPRGLAAIRTYIEDKVPSTVNLTVLEPCSRCH 513
>Os04g0479500 Conserved hypothetical protein
Length = 227
Score = 179 bits (454), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 124/182 (68%), Gaps = 7/182 (3%)
Query: 3 LGSDSEAVNIPMLPTKFLYLKHLTIQ-IAGGTFSPSYDYFFLVSFVDASPSLETLYLDVC 61
+ S +E V+ PMLPTKF+YLKHLTI+ I G T S YDYF LVSF++ASPSLETL L+V
Sbjct: 35 IESVNEVVDAPMLPTKFIYLKHLTIRMITGSTISRPYDYFSLVSFINASPSLETLILNVT 94
Query: 62 QDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERLV 121
M +ESI S LR +PE H LKSVKI GF+SAKSLVELTC I+ AVSLE L
Sbjct: 95 LR-MVNESIFTDS--QLRHIPEHHHGHLKSVKITGFSSAKSLVELTCYILNNAVSLECLT 151
Query: 122 LDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCTR 181
LDT+ G C + + C+P+ + VL E+ R A+R YIEDKV LT++EPC+R
Sbjct: 152 LDTIYGPR---CDQDKYRRCFPMIDGVLTEAPRGLAAIRTYIEDKVPSTVNLTVLEPCSR 208
Query: 182 CH 183
CH
Sbjct: 209 CH 210
>Os09g0506700 Cyclin-like F-box domain containing protein
Length = 504
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 121/185 (65%), Gaps = 6/185 (3%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGG-TFSPSYDYFFLVSFVDASPSLETLYLD 59
+ +GS E V+ PMLP+KFL+LK LTI + G TFSP+YDYF LVSF+DASPSLET +LD
Sbjct: 321 LTIGSPHEMVDTPMLPSKFLHLKCLTISLVGMVTFSPAYDYFSLVSFLDASPSLETFFLD 380
Query: 60 VCQDDMAHESIIESSSPHLRQLPE-LSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLE 118
V Q+ M H SI S LRQ+PE H L+SVKI GF SAKSL+ELTC I+ SL+
Sbjct: 381 VSQERMGHVSIF-GDSLQLRQMPEHHRHGNLQSVKITGFCSAKSLIELTCYILDNTTSLK 439
Query: 119 RLVLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEP 178
L LDT RG C K C+P+ +L E+ RA +A+ +IE KV L + +P
Sbjct: 440 CLTLDTTRGVSS--CSTGEHKKCFPIGK-MLTEANRAVLAIETFIERKVPSTVKLAVTKP 496
Query: 179 CTRCH 183
C+RCH
Sbjct: 497 CSRCH 501
>Os01g0774200 Conserved hypothetical protein
Length = 279
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ L S E VN PMLPTKFLYLKHLTI ++ GTFSPSYDYF LVSF+DASPSLETL LDV
Sbjct: 132 LALSSYDEVVNTPMLPTKFLYLKHLTICLSSGTFSPSYDYFSLVSFLDASPSLETLNLDV 191
Query: 61 CQDDMAHESII-ESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLER 119
D M HESI+ SS HLRQ+ E H LK+V+I GF+SAKSLVELTC I+K +VSLE
Sbjct: 192 TNDPMKHESILGHSSKSHLRQMAEDHHCHLKNVEITGFSSAKSLVELTCYILKNSVSLEC 251
Query: 120 LVLDTLRGGDDRCCGE 135
L LDTL D RC E
Sbjct: 252 LTLDTLYPYDFRCSDE 267
>Os08g0552900 Cyclin-like F-box domain containing protein
Length = 480
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 102/135 (75%), Gaps = 5/135 (3%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIA-GGTFSPSYDYFFLVSFVDASPSLETLYLD 59
+ + S+ E VN PMLPTKFLYLKHLTI ++ +F+ SYDYF LVSF+DASPSLETL L+
Sbjct: 344 LAIYSNDEVVNTPMLPTKFLYLKHLTISVSSAASFNTSYDYFSLVSFLDASPSLETLILN 403
Query: 60 VCQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLER 119
V Q+ M HES++ SSP LRQ+PE H LKSVK+ GF+SAK+L+ELTC I+K AVSLE
Sbjct: 404 VSQEHMKHESVLGDSSP-LRQMPEHRHCYLKSVKMTGFSSAKNLIELTCYILKNAVSLEC 462
Query: 120 LVLDTLRGGDDRCCG 134
L LDTL +R C
Sbjct: 463 LTLDTLY---ERACS 474
>Os03g0202500 Cyclin-like F-box domain containing protein
Length = 510
Score = 150 bits (379), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 7/179 (3%)
Query: 5 SDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDVCQDD 64
SD E V+ PMLP+KF YLK LTI +A SP+YDYF L+SF+DASPSLET L +D
Sbjct: 335 SDHEMVDTPMLPSKFFYLKCLTIDLAW-RLSPAYDYFSLISFLDASPSLETFCL---EDR 390
Query: 65 MAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERLVLDT 124
M +E II S H+RQ+ E HD L+SV+I+GF KSL+ELTC I+ SL+ L LDT
Sbjct: 391 MENELIIGDMS-HMRQMLEHRHDNLQSVEIIGFCYTKSLIELTCHILDNTTSLKHLKLDT 449
Query: 125 LRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCTRCH 183
R D C C+ + +L E+ +A +A+ YIE KV L +V+PC RCH
Sbjct: 450 TR--DVFSCSTGKHDKCFHMGKDMLTEAKKAVLAIETYIEPKVPSTVMLNVVKPCNRCH 506
>Os05g0571700 Cyclin-like F-box domain containing protein
Length = 517
Score = 147 bits (370), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 113/181 (62%), Gaps = 7/181 (3%)
Query: 5 SDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDVCQDD 64
SD+E VN PM+P+KF +LK+L+I + G T YDY LVSF DASP LET L+ ++
Sbjct: 342 SDTEMVNTPMVPSKFYHLKYLSIALGGQT----YDYLSLVSFFDASPFLETFILNALRER 397
Query: 65 MAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERLVLDT 124
+I S LR +PE HD LK VKI+ F+S K+LVELTC IV++A +LE L LDT
Sbjct: 398 TERATIFGDPSG-LRMMPEHRHDKLKCVKIINFSSVKTLVELTCHIVESATALECLTLDT 456
Query: 125 LRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCTRCHS 184
G RC GK C+ + L E+ RA AV+ YIE KV L ++EPC+RCH+
Sbjct: 457 -TSGSPRCSVNRLGK-CFLMRRETLMEAHRALKAVQTYIELKVPSKVELNVLEPCSRCHA 514
Query: 185 L 185
L
Sbjct: 515 L 515
>Os09g0325220 Cyclin-like F-box domain containing protein
Length = 525
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 113/185 (61%), Gaps = 4/185 (2%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ +G E VN PM+P FL LK+L I ++ T SPSYDY LVSF+DA PSL+T +DV
Sbjct: 331 LTIGLLGEMVNTPMVPNTFLLLKYLCITLSAVTLSPSYDYLSLVSFLDACPSLDTFIVDV 390
Query: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
++SI E+ S HLRQLPE HD L++VKI GF SAKSL ELT I++ S+E L
Sbjct: 391 SAKHPKNDSIFENPS-HLRQLPEQRHDNLRNVKITGFRSAKSLFELTYHILENT-SVECL 448
Query: 121 VLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCT 180
LDT RC G+ C S E+++A A+R YIE KV L +VEPC+
Sbjct: 449 TLDT-SFESFRCSPGKPGR-CLQTSKDDPMEASKALFAIRTYIEGKVPSTVRLNVVEPCS 506
Query: 181 RCHSL 185
RCH +
Sbjct: 507 RCHVM 511
>Os03g0217200 Cyclin-like F-box domain containing protein
Length = 511
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 111/184 (60%), Gaps = 4/184 (2%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ + S E + P P KFL+L++L+I AG FS +YDYF LVSF+DASP LET L +
Sbjct: 331 LNISSRCEMSHTPTAPGKFLHLRYLSITFAGWRFSRAYDYFSLVSFLDASPLLETFILCI 390
Query: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
Q ++ + P RQ+ E HD LK+VKI GF+S KSLVELTC I++ SLE L
Sbjct: 391 LQKGKHDLTLRDPIYP--RQMSERQHDSLKNVKINGFSSTKSLVELTCHILQNTTSLECL 448
Query: 121 VLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPCT 180
LDT R + C +S+ +C P +K + +A +A+R YIE V +++EPC
Sbjct: 449 TLDTTR--IEFRCSDSSVDVCLPSDRDAIKGAHKALLAIRTYIEGIVPATVKFSVLEPCR 506
Query: 181 RCHS 184
RC++
Sbjct: 507 RCYA 510
>Os05g0531800
Length = 376
Score = 137 bits (345), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 110/187 (58%), Gaps = 7/187 (3%)
Query: 3 LGSDSEAVNIPMLPTKFLYLKHLTIQIAG--GTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ S E VN + P KFL+LK L I + G G FSP+YDY L F+D SP LET L V
Sbjct: 180 ISSFGEEVNTVVAPFKFLHLKSLMINLIGFNGAFSPAYDYLSLAYFIDVSPVLETFTLIV 239
Query: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
Q M H+ I E SS HLRQ+P H +K+V I+GF SAKS++ELTC I++ A SLE L
Sbjct: 240 SQIRMEHDVISEDSS-HLRQMPRSIHGNIKNVNIIGFCSAKSMIELTCHILENATSLECL 298
Query: 121 VLDTLRGG---DDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVE 177
LDT+ DR G C + + ++ E+ A +A++RYI KV L +++
Sbjct: 299 TLDTIHDDYVHPDRLSVHEVG-FCGCIGSPMIMEAENALLAIKRYIVGKVPSTVKLVVLK 357
Query: 178 PCTRCHS 184
PC CH+
Sbjct: 358 PCGWCHA 364
>Os05g0532300
Length = 669
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 3 LGSDSEAVNIPMLPTKFLYLKHLTIQIAG--GTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ S E N + P KFL+LK L I + G G FSP+YDY L F+ ASP LET L V
Sbjct: 339 ISSFGEKFNTVVAPFKFLHLKSLKISLIGFNGAFSPAYDYLSLAYFIGASPVLETFTLIV 398
Query: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
Q M H+ I E+SS HLRQ+P SH +K+V I+GF SAKS++ELTC I++ A SLE L
Sbjct: 399 SQIRMEHDVISENSS-HLRQMPRSSHGNIKNVNIIGFCSAKSMIELTCHILENATSLECL 457
Query: 121 VLDTLRGG---DDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVE 177
LDT+ DR G C + + ++ E+ A +A++RYI KV L +++
Sbjct: 458 TLDTIHDDYVHPDRLSVHEVG-FCGRIGSPMIMEAENALLAIKRYIVGKVPSTVKLVVLK 516
Query: 178 PCTRCHS 184
PC CH+
Sbjct: 517 PCGWCHA 523
>Os06g0142100 Cyclin-like F-box domain containing protein
Length = 512
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 108/185 (58%), Gaps = 8/185 (4%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ + S E P L +KFL L+HL+I + G + P+YDY L S++ A+PSLET YL V
Sbjct: 330 LAMKSFKETAFAPKLCSKFLCLRHLSIALIG--YFPAYDYLSLASYIHAAPSLETFYLTV 387
Query: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
Q + + SI + LR + E H LKSV++ F S KSLVELTC I+++ SLE L
Sbjct: 388 MQRYVQNVSIFAHPA-DLRSIREEQHHSLKSVRVTSFISVKSLVELTCHILESTTSLECL 446
Query: 121 VLDTLRGGDDRC--CGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEP 178
LD + G RC G GK C P+ ++ E R +A+RRYI+ +V L ++EP
Sbjct: 447 TLDASQTG-FRCDTPGSKIGK-CPPLDRDIIMEGHRGVLAIRRYIQPRVPSTVKLNVLEP 504
Query: 179 CTRCH 183
C+ CH
Sbjct: 505 CS-CH 508
>Os06g0139000 Conserved hypothetical protein
Length = 446
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 107/186 (57%), Gaps = 8/186 (4%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ L S E P L +KFL L+HL+I + G F P+YDY L S++ A+PSLET L+V
Sbjct: 264 LALKSCKETAFAPKLCSKFLCLRHLSIGLIG--FFPAYDYLSLASYIYAAPSLETFDLNV 321
Query: 61 CQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERL 120
Q ++ SI + LR + E H LKSV + F S KSLVELTC I+++ SLE L
Sbjct: 322 MQRNVQSVSIF-AHPADLRSIREEKHHNLKSVTVTSFISVKSLVELTCHILESTASLECL 380
Query: 121 VLDTLRGGDDRCCGESNGKI--CWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEP 178
LD + G C KI C P+ ++ E R +A+RRYI+ +V LT++EP
Sbjct: 381 TLDASQTGFR--CDTPGSKISKCPPLDRDIIMEGHRGVLAIRRYIQPRVPSTVKLTVLEP 438
Query: 179 CTRCHS 184
C+ CHS
Sbjct: 439 CS-CHS 443
>Os04g0626600 Conserved hypothetical protein
Length = 243
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 3 LGSDSEAVNIPMLPTKFLYLKHLTIQIAGG-TFSPSYDYFFLVSFVDASPSLETLYLDVC 61
+ S E ++ PM+P KFL+L+ L I +A F P+YD+F LVSF+D SP+LET L V
Sbjct: 62 VSSTDEMISTPMVPIKFLHLELLEIYLAELLAFPPNYDFFSLVSFLDGSPALETFILHVK 121
Query: 62 QDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERLV 121
Q +SI++ +LRQ+ H L++V I GFNS KS++ELT I++ A SL+ +
Sbjct: 122 QRCERRDSILDGEHTNLRQILHPRHANLQNVTITGFNSTKSMIELTSHILENAPSLKCIT 181
Query: 122 LDTLRGGDDR--CCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPC 179
LDT D GE C P+ + E+ +A A +RYI KV +EPC
Sbjct: 182 LDTANFYDKNLLTMGE-----CLPMRKGGILEARKAFDAAKRYIAGKVPAHVEYKFLEPC 236
Query: 180 TRCH 183
+CH
Sbjct: 237 RKCH 240
>Os11g0527300 Hypothetical protein
Length = 261
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 110/202 (54%), Gaps = 24/202 (11%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAG--GTFSPSYDYFFLVSFVDASPSLETLYL 58
+++ S E VN PM+P KFLYL++L + G P YD+F LV F+DASP+LET L
Sbjct: 51 LDIPSLPEDVNTPMVPNKFLYLRYLEMVFIGPRKESPPCYDFFSLVFFLDASPALETFVL 110
Query: 59 DVCQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLE 118
+ ++ I+E SS LR+LP+ ++ LK+VKI G S+K+LVEL I+ SLE
Sbjct: 111 HLDSVGTKNDRILEDSS-ELRKLPKCNYSNLKNVKITGLMSSKTLVELISHILDNTPSLE 169
Query: 119 RLVLDTLRGG-------------------DDRCCGESNGKICWPVSNAVLKESARAAIAV 159
L LDT G DDR E + ++ +S++ L E+ RA +
Sbjct: 170 FLTLDTRIYGFKYEIRRFISWDCGIMMTTDDRMESELDRELL--MSDSDLIEAYRAPQVI 227
Query: 160 RRYIEDKVSPITTLTLVEPCTR 181
RRYIE KV ++EPC +
Sbjct: 228 RRYIEGKVPSTVNFEVIEPCRK 249
>Os04g0626700 Leucine-rich repeat 2 containing protein
Length = 364
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 3 LGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFS-PSYDYFFLVSFVDASPSLETLYLDVC 61
+ S +E + P++P+KFL+LK L I + S PSYD+F LVSF+DASP+LET L V
Sbjct: 183 VSSPNEMTSTPVVPSKFLHLKFLEIYLKELFASLPSYDFFSLVSFLDASPALETFILHVE 242
Query: 62 QDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLERLV 121
Q H+SI++ LR++ H L++V I GFNS KS++ELT I++ A SL+ +
Sbjct: 243 QQFERHDSILDGEPTDLRRILHDGHANLQNVTITGFNSTKSMIELTTHILENAPSLKCIT 302
Query: 122 LDT--LRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLVEPC 179
LDT G + GE C P+ + E+ RA A RR+I K+ +EPC
Sbjct: 303 LDTANFSGKNHLAMGE-----CSPMMRGGILEARRAFEAARRHIAGKIPSFVEYKFLEPC 357
Query: 180 TRCH 183
CH
Sbjct: 358 RHCH 361
>Os09g0562400 Similar to mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 1972
Score = 106 bits (265), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 1 MELGSDSEAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ L S E PMLP KFL+L++L + G F SYDYF L SF +A P+LET Y+
Sbjct: 1787 LTLASSKEDFITPMLPVKFLHLRNLNVYFDGIRFQ-SYDYFSLASFFEACPALETFYIWA 1845
Query: 61 CQDDMAHESII----ESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVS 116
+ D+A + + S +R++PE+ H LK V I F +KSL+ELT I++ A S
Sbjct: 1846 GEYDLAWKDPALQDSNADSLQIRRIPEIHHANLKKVSINRFFPSKSLIELTYLIIENASS 1905
Query: 117 LERLVLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLV 176
L+ L LD G D +C ++ + + A ++YIE KV ++
Sbjct: 1906 LQCLKLDAGYGFD-------TSGMCKRMNKLDVLHALSAVEVAKKYIEGKVPSSVKFNIL 1958
Query: 177 EPCTRCH 183
EPC RCH
Sbjct: 1959 EPCERCH 1965
>Os10g0384600 Cyclin-like F-box domain containing protein
Length = 553
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 99/187 (52%), Gaps = 14/187 (7%)
Query: 8 EAVNIPMLPTKFLYLKHLTIQIAGGT-FSPSYDYFFLVSFVDASPSLETLYLDVCQ---- 62
E + P++ KF LKHL I + T F YD+ L SFVDA P+LET L +
Sbjct: 363 ERLKAPVMHDKFQQLKHLVICLGQSTMFCAGYDFLSLASFVDACPALETFILRIAYGIRW 422
Query: 63 -DDMAHESIIESSSPHLRQLPELSHDC----LKSVKILGFNSAKSLVELTCGI-VKAAVS 116
+D + + +S R+ +L + L+ V I GF SA SLVELTC I V AA+S
Sbjct: 423 YNDQNRGNPDDGASCRGREASKLRNGGIVGNLRKVTITGFCSANSLVELTCHILVIAALS 482
Query: 117 LERLVLDTLRGGDDRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLTLV 176
LE L LDT G D +C S+ C +S L+E+ A A R+Y+E KV L ++
Sbjct: 483 LEHLTLDTSPGYDRKC---SSYDRCRKMSTEALREAETALAAARKYVEPKVPDSVNLMVL 539
Query: 177 EPCTRCH 183
PC RCH
Sbjct: 540 GPCGRCH 546
>Os05g0538200
Length = 592
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 11/156 (7%)
Query: 41 FFLVSFVDASPSLETLYL----DVCQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILG 96
+ + + P+LE+L + +V Q M H+S+ ++ +LR +P H+ LK V I+G
Sbjct: 314 YVITKLQNIVPNLESLTIYSDDEVQQGGMKHDSVSGDTTTNLRTMPGHKHERLKEVMIIG 373
Query: 97 FNSAKSLVELTCGIVKAAVSLERLVLDTLRGGDD-----RCCGESNGKI--CWPVSNAVL 149
F SA S+VELTC I++ SLE + LD + D RCC + K C+P+ ++
Sbjct: 374 FCSATSMVELTCHILENTTSLETITLDAVCDVHDLENIGRCCTTTIRKTGSCYPLRREMI 433
Query: 150 KESARAAIAVRRYIEDKVSPITTLTLVEPCTRCHSL 185
E+ R +A+ RYI KV I LT+ EPCT CH L
Sbjct: 434 LEAHRGVMAIERYIRGKVPSIVELTIREPCTWCHDL 469
>Os05g0535300 Conserved hypothetical protein
Length = 177
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 14/130 (10%)
Query: 59 DVCQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLE 118
+V Q M H+ I E SS HLRQ+P HD +K+VKI+ VELTC I++ A SLE
Sbjct: 53 EVSQTRMEHDVISEDSS-HLRQMPGHHHDTIKNVKIM--------VELTCHILENATSLE 103
Query: 119 RLVLDTLRGGD----DRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLT 174
L LDT+ G+ DR G+ C + + ++ E+ A +A+ RYI KV L
Sbjct: 104 GLTLDTIFDGNNNPADRLSVHEVGR-CGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLD 162
Query: 175 LVEPCTRCHS 184
+++PC+ CH+
Sbjct: 163 VLKPCSWCHT 172
>Os09g0506300 Cyclin-like F-box domain containing protein
Length = 304
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Query: 40 YFFLVSFVDASPSLETL----YLDVCQDDMAHESIIESSSPHLRQLPELSHDCLKSVKIL 95
Y+ V + P+LETL Y ++ +D M +SI SS ++RQ+ E HD L+SV I
Sbjct: 182 YYARVESIPNVPNLETLTICSYHEIPKDSMEDDSIFGDSS-NMRQMQEYRHDNLQSVVIT 240
Query: 96 GFNSAKSLVELTCGIVKAAVSLERLVLDTLRGGDDRCCGESNGKICWPVSNAVLKESARA 155
F SAKSL+ELTC I+ SLE L LDT RG C C+P+ A++ ++ RA
Sbjct: 241 CFCSAKSLIELTCCILDCTTSLEYLTLDTTRGV--YSCSTGKHSQCFPMDKAMIPKANRA 298
Query: 156 AIAV 159
+A+
Sbjct: 299 MLAI 302
>Os09g0502800 Conserved hypothetical protein
Length = 67
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 43/53 (81%)
Query: 8 EAVNIPMLPTKFLYLKHLTIQIAGGTFSPSYDYFFLVSFVDASPSLETLYLDV 60
+ VN PML TKFLYLK+L+I ++G T SPSYDYF LVSF+DASP LET +L V
Sbjct: 2 QVVNTPMLTTKFLYLKYLSISLSGLTVSPSYDYFSLVSFLDASPFLETFFLAV 54
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,345,239
Number of extensions: 244119
Number of successful extensions: 736
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 690
Number of HSP's successfully gapped: 24
Length of query: 188
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 93
Effective length of database: 12,075,471
Effective search space: 1123018803
Effective search space used: 1123018803
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)